Hydra vulgaris (swiftwater hydra): 100203838
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Entry
100203838 CDS
T01080
Name
(RefSeq) ATP-dependent DNA helicase PIF1
KO
K15255
ATP-dependent DNA helicase PIF1 [EC:
5.6.2.3
]
Organism
hmg
Hydra vulgaris (swiftwater hydra)
Brite
KEGG Orthology (KO) [BR:
hmg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hmg03032
]
100203838
03029 Mitochondrial biogenesis [BR:
hmg03029
]
100203838
Enzymes [BR:
hmg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
100203838
DNA replication proteins [BR:
hmg03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
100203838
Mitochondrial biogenesis [BR:
hmg03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial DNA replication factors
Mitochondrial DNA maintenance factors
100203838
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PIF1
Pif1_2B_dom
AAA_30
AAA_19
PH_LRR1
Mg_chelatase
AAA_22
PhoH
DEAD
UvrD_C_2
AAA_7
AAA
ABC_tran
TsaE
DLH
AAA_29
Motif
Other DBs
NCBI-GeneID:
100203838
NCBI-ProteinID:
XP_012559164
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All DBs
Position
14:34048743..34065747
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AA seq
641 aa
AA seq
DB search
MECYGNLQCTLIVEVLNQNGQIQRRQEFSGVNIKLGRDQFRDILIKFASETYALKDFSIL
DKFLSMGKTTIMFQKLRTNLLISNAPPDQLVIFLKMIKIKAAIHKTTATDRIKLYSNAKK
SFEEISPVTLQDVKLFKDKQAMTTHSLKNSNIQVTPIRATKRGLEVVDDKPRKRLHSSTS
AISLIKLGNKVEIPKKVICPDLIHSSDDKAVKFNCLLTKEQEEVIRAVKQGFNVFFTGSA
GTGKSYLLKRIIGALPPDTTVASASTGVAACQIGGVTLHSFAGIGSGDGSLEKCIELASR
PSVIRNWKRCKALLIDEVSMIDAEFLDKIEQVARAVRNSELPFGGIQLIMCGDFLQLPPV
KKKKQIQNYEFCFQAKCWKDIIQVSMELTEVKRQKDEDFINLLRYIRVGKCPEEVYNKLI
STQNNEIEVAGIQATRLCTHKNIAEEINATKMNELKTESRVYISSDSNSEHSEQMNKQLL
VQNKIELKVGSQVMLTKNLDVSRGLVNGARGVVVKFSSDKDGLPMVRFAKGIELVIKREK
FVCKTLVETVSRVQLPLQLAWAISIHKSQGLTLDCCEVSLDRVFENGQAYVALSRAKSLQ
SLRVLDMTRNCVRAHKDVLKFYIKLRRDISLASSNKENEVY
NT seq
1926 nt
NT seq
+upstream
nt +downstream
nt
atggaatgttatggcaatttacagtgcacacttattgtagaagttttgaatcaaaatgga
cagattcaaaggcgtcaggaattttcaggtgttaatataaaattagggcgtgaccagttt
cgagacattttaataaagttcgctagtgaaacatacgccttaaaagattttagtatatta
gataagtttttgagtatgggtaaaacaacaataatgttccagaaacttcgtacaaattta
ttaatatcaaatgcccctcctgatcagttagttatttttttaaaaatgataaaaattaaa
gcagctattcataagactacagcaaccgaccgcattaaattatattctaatgcaaagaaa
tcatttgaagagatcagcccagtgactttgcaggatgttaagttatttaaagataaacaa
gccatgactacccattctttaaaaaattcaaatattcaagttactcctattcgtgctact
aaacgtggtctagaagttgttgatgacaaaccaagaaaaagacttcattcgtctacctct
gcaattagtttgataaaacttggaaataaagtagaaatacctaaaaaagtgatatgtcct
gacttaattcattcatcagatgataaagcggtaaagttcaattgcttattaactaaagag
caagaagaggtaatcagggctgttaaacaaggtttcaatgttttttttactggaagtgca
ggaacaggaaagtcatatttgcttaaaagaataattggtgctcttccacctgatacaaca
gtggcttctgcaagtacaggtgttgctgcatgtcaaattggtggtgttacattgcattcc
tttgcagggattggatctggtgatggtagtttagaaaagtgcattgaactagcatctcgc
ccatctgttattcgaaattggaagcgttgtaaagcacttttaattgatgaggtatcaatg
atagatgctgaatttcttgataaaatcgaacaggttgctcgtgcagtacgcaattcagag
ctgccatttggtggtatacagctcataatgtgtggggattttttgcaactacctccggta
aaaaaaaaaaaacaaatacagaattatgagttctgtttccaagcaaaatgttggaaagat
attatccaggtttctatggaattaaccgaagtaaagcgacaaaaagatgaagactttatc
aatttattgcgctacattcgtgtaggaaagtgtccagaggaagtatacaacaagttaatt
tcaacacaaaataatgaaattgaagttgcaggtattcaagcaactaggttgtgcactcat
aagaatattgcagaggaaattaatgccacaaagatgaatgaacttaaaacagaatcaaga
gtttatatatcttcagatagcaacagcgaacacagtgaacaaatgaataagcaacttctt
gttcaaaataaaatagagctcaaagttggatcacaggtgatgttgacaaaaaatcttgat
gtaagcagagggcttgttaacggtgcacgtggtgtagttgtcaagttttcatcagataaa
gatggtttacctatggttcggtttgctaaaggtattgagttagtaattaagcgagaaaaa
tttgtttgcaaaacccttgttgaaactgtttctcgagtgcaactcccattacagctagct
tgggcgatttcaattcacaaaagtcagggtttaactctggattgttgtgaagtttcgctt
gatcgtgtttttgaaaatggccaggcctatgtcgcactatcgcgtgcaaaaagccttcaa
agtttacgagttcttgacatgacgcgtaattgcgttcgtgcgcataaagatgttttaaag
ttctatattaagttaagacgcgacatcagtttagcttcgtcaaacaaagaaaatgaagtt
tactaa
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