Hydra vulgaris (swiftwater hydra): 100203935
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Entry
100203935 CDS
T01080
Symbol
LOC100203935
Name
(RefSeq) ubiquitin recognition factor in ER-associated degradation protein 1 isoform X1
KO
K14016
ubiquitin fusion degradation protein 1
Organism
hmg
Hydra vulgaris (swiftwater hydra)
Pathway
hmg04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
hmg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
100203935 (LOC100203935)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
hmg03009
]
100203935 (LOC100203935)
Ribosome biogenesis [BR:
hmg03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
100203935 (LOC100203935)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UFD1_N1
UFD1_N2
CDC48_2
Motif
Other DBs
NCBI-GeneID:
100203935
NCBI-ProteinID:
XP_047141676
LinkDB
All DBs
Position
10:42123296..42169435
Genome browser
AA seq
307 aa
AA seq
DB search
MFNFGMFASNLPLSFNTQYRCYSVAMLSGNERKDVERGAKIILPPSALDILTRLNIVYPM
LFKLTNHRLKKYTHCGVLEFVADEGKAYIPHWMMQSLLLSEGDLINIQSATLPVATFAKF
QPQTVDFLDITDPKAVLEKVLRSFACLTKGDLIAIKYNDKDYELLVLETKPQDAVSIIEC
DMQVDFAPPVGYVDPKKEPEKKKSEEEDEISFDGIPEEYIDRGKEKLFPGTGVTLHGKKK
RSKDIVDGESPVKPIIIKRGIPDLKYKIGTLVFKRKPIRPSDQTENNSGPIFRAFEGEGV
SLRKKKL
NT seq
924 nt
NT seq
+upstream
nt +downstream
nt
atgtttaatttcggaatgtttgctagcaatttacctctatcatttaacacacaatataga
tgctactcagttgctatgttaagtggcaatgaaagaaaagatgttgaacgaggagctaaa
attatcttgccaccttctgctctagacattttaactcgtcttaatattgtataccctatg
ttatttaaactgaccaatcatcgactaaagaaatacactcattgtggtgttttggagttt
gttgcagatgaaggaaaagcctatattcctcattggatgatgcagagtcttctattaagt
gagggggatttgatcaacattcagagtgctacgctacctgttgctacatttgcaaaattt
caacctcaaacagttgattttcttgatataactgatcctaaggctgttttagaaaaagta
ttgcgttcatttgcttgtcttacaaaaggagatttaattgcaataaagtataatgataag
gattatgaattactagttcttgaaactaaaccacaggatgcagtttctatcattgagtgt
gacatgcaggttgattttgcacctcctgttggttatgttgatccaaaaaaagaacccgag
aaaaaaaagtcagaagaagaagatgaaatatcattcgatggtattccagaagagtatata
gacagaggaaaagaaaagctttttcctggtacaggagttactctacatggtaaaaaaaag
cgttcaaaagacattgtagatggtgaatcgcctgtcaaaccaattattataaaaagaggt
atacctgatctgaagtataaaataggtactttagtgtttaagagaaaacctattcgacct
tctgaccaaacagagaataattctggtccgatatttcgagcattcgagggagaaggggtt
tctttgcggaagaaaaagttataa
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