Hydra vulgaris (swiftwater hydra): 100204247
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Entry
100204247 CDS
T01080
Name
(RefSeq) vacuolar protein sorting-associated protein 35
KO
K18468
vacuolar protein sorting-associated protein 35
Organism
hmg
Hydra vulgaris (swiftwater hydra)
Pathway
hmg04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
hmg00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
100204247
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hmg04131
]
100204247
Membrane trafficking [BR:
hmg04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Retromer subcomplex
100204247
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps35
YusW
MitMem_reg
Motif
Other DBs
NCBI-GeneID:
100204247
NCBI-ProteinID:
XP_047132452
UniProt:
A0A8B6XR47
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Position
1:complement(41621526..41660975)
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AA seq
797 aa
AA seq
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MSVQHMSPQEEQEKLLEEALQVVKTQAFQMKRCLDKSKIMDALKHASNMLGELRTSLLSP
KSYYELYMCVSDELNHLEIFLLDEFDKGRKVNDLYELVQYAGNIVPRLYLLITVGIVYIK
FGDVPKKDVIKDLVEMCRGTQHPLRGLFLRNYLLQSTRGQLPDNDSDPSQGTVHDSIDFI
LLNFAEMNKLWVRMQHQGHSKFKEKRERERQELKILVGTNLVRLSQLEGIDVEIYKKDVL
PGVLEQCICCRDAIAQEYLMECIIQVFPDDFHLQTLNPFLKACADLHQDVNVKNIIIALI
DRLAMYANRGDGPGIPNDIRLFEIFSQQVAHVIQSRSDMPTEDIVALQVSLINLALKCYP
DRVDYVDKVLEYTEEIFSKLNLAHIDKNNAVSKELMRLLKIPVDAYNNVLTILKLKHFAP
LFGYFHYATRKEMAMYVINNALDNETYIPSMEEVDSVLQLAAPLIMDQDDQPAEPEDPED
FAEEQGLMGRLVTLLYSDNPDQQYLILTTARKHFGNGGEKRIKLTLPPLVFAAFRLAFIY
RSQQDQDDKWDKKCQKIFQFCHQTICALSKAEYAELSLRLFLQGALAADQQRFTNAETVA
YEFMSQAFAIYEDEISDSKAQLAAITLIIGTFEKMVCFSEENHEPLRTQCALAASKLLKK
PDQCRGVSVCSHLFWSGRVNNEDDTEKVECHDGKRVMECLKKSLRIANQCMDPTVQVQLF
VEILNRYLYYYGRGNEAVNSTILNQLIDKIREDLPGLETNDETDQINKHFQNTLMRIQSK
KASSDESEAALYKDLLF
NT seq
2394 nt
NT seq
+upstream
nt +downstream
nt
atgtcggttcaacacatgtctcctcaagaagaacaggaaaagctattagaggaagcactt
caagttgtaaagactcaagcttttcaaatgaagcgctgtctggacaaatcgaaaatcatg
gatgcattaaagcatgcatctaacatgcttggagagttacgaacgtctctactttcacct
aaaagttactatgaattatacatgtgtgttagcgatgaattaaatcaccttgaaattttc
ttgttggatgaatttgataaaggccgaaaagttaatgatctatatgaactagtgcaatat
gctggcaatattgttcccagactgtacttgctaataactgttggtattgtttacataaag
tttggtgatgtaccaaaaaaagatgttataaaagatttggttgaaatgtgtcgtggaaca
caacatccattacgcgggttgtttctaagaaactatttattacaatctactcgaggtcaa
ctcccagacaatgatagtgatccaagccaagggacagttcatgattcaattgattttatt
cttctaaattttgctgaaatgaataagctttgggtaagaatgcaacatcaaggccattca
aagtttaaagaaaaaagagagcgtgagcgtcaggaattaaaaattttagttggaacaaac
cttgtgagattgagccagctggaaggaatcgatgtggaaatttataaaaaggatgtttta
ccaggagtattagaacaatgtatatgctgcagggatgctattgctcaggagtatcttatg
gaatgtatcatacaagtttttccagatgattttcatcttcaaaccctaaatccgttttta
aaagcttgcgcagatcttcatcaagatgtgaatgtcaaaaatattattattgcactgatt
gatcgtctggccatgtatgctaatcgtggagatggaccaggcattcctaatgatattcgt
ttgtttgaaattttctctcaacaagtggctcatgtaattcagtcaaggagtgacatgcca
acagaagacattgtggctttacaagtatctcttattaatcttgctttgaaatgttatcca
gatcgtgttgactatgttgataaagtcctagagtacactgaagaaatatttagtaaactt
aatttggctcatattgataaaaacaatgctgtttcaaaagaattgatgcgattgctcaaa
attcctgttgatgcatacaacaatgtccttaccattttaaagttgaagcattttgctcca
ctttttggatattttcattatgctactaggaaagaaatggcaatgtatgtaattaataat
gctcttgacaatgaaacttatataccgtctatggaagaggttgacagtgttctccagctt
gctgcacctttgattatggatcaagatgatcagcctgcagaaccagaagatccagaagac
tttgcagaagagcaagggcttatgggtagacttgttacattgctttactcagataatcct
gatcaacaatatttgatactaacgactgctcgtaaacattttggtaatggtggggaaaaa
agaattaagttgactcttcctcctttggtctttgcagcatttagattagcctttatttat
cgcagccaacaagatcaggatgataagtgggacaaaaaatgccaaaagatttttcagttt
tgccaccaaactatatgtgcactttctaaagctgaatatgcagaactatcattaagattg
tttcttcaaggagctctagctgctgatcaacagaggtttactaatgctgaaacagttgca
tatgagttcatgagccaggcatttgcaatatatgaagatgaaatctcagattccaaagca
caactggctgcaattacattaataattggaacctttgagaaaatggtttgctttagcgaa
gaaaaccatgaaccacttcgaactcaatgtgcacttgcagcttcaaaacttcttaaaaag
ccagaccaatgtcgaggtgtttctgtatgttcccatttattctggtcagggcgtgtaaac
aatgaagatgatacagaaaaagttgaatgtcatgatggtaaacgagtaatggaatgtttg
aagaaatctctacgtattgctaatcaatgcatggatccaacggtgcaagttcagctgttt
gtagaaatactaaacagatatttgtattactatgggaggggaaatgaagctgttaattca
acaattttaaatcaattgatcgacaaaattcgcgaagatcttcctggattggagacaaat
gacgaaactgatcaaataaacaaacactttcaaaatactctaatgagaattcaatctaaa
aaggcgagctccgatgaaagcgaagccgcactttataaagatcttttattttga
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