Hydra vulgaris (swiftwater hydra): 100204654
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Entry
100204654 CDS
T01080
Name
(RefSeq) hypoxia-inducible factor 1-alpha isoform X1
KO
K08268
hypoxia-inducible factor 1 alpha
Organism
hmg
Hydra vulgaris (swiftwater hydra)
Pathway
hmg04137
Mitophagy - animal
hmg04140
Autophagy - animal
hmg04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
hmg00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
100204654
04137 Mitophagy - animal
100204654
04148 Efferocytosis
100204654
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hmg03000
]
100204654
Transcription factors [BR:
hmg03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
100204654
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAS_3
PAS_11
PAS
bHLH_HIF1A
PAS_4
Motif
Other DBs
NCBI-GeneID:
100204654
NCBI-ProteinID:
XP_002167197
UniProt:
T2MD63
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All DBs
Position
2:complement(58416013..58438999)
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AA seq
518 aa
AA seq
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MEQSKRNKSRDAARQRRGKQNGEFGELACQLPLPKGVAENLDRLCTMRLSNSFIKIKHVL
KQIIGTITPEQNTSSYFNACIPQALGGFIFVLNKDGQCLYISPNIKENLGLNQLDMMGDS
FYKYVQPCDQATLAEQIGGQVPLEDMEIFDGLFCSEAAPCLQNPKKKICDELKNSPYRSF
FLRMKSTLTSRGKNVNINASTYRVVHCTGTIKNYKTKLDLNEGFTQCLLAIGNPLLTSTS
VEFPIDRKTFISKHSLDMKIFEMDNITSSILGYSDKEMLGYSWYIYIHLCDTDVVKACHE
TLLKKGQSVSAYYRVLHLNGGWLWLQTIGNVVYLESNGQPQYIFCMHTVVSGLEAEGTVL
STKQLDVSVKRKHEINNVNVKKSSIKEIKVSNTDLESYVPVKIFKEKVVEKSNPHYLPDS
PRPPPPPQLSNNMDDELSDSDIPDLEFLDYDDVGVPLTENFVFDRSPYVPSPMADVKLKV
DLDDMLKITPKVPFDCIESFPFDDKDTNCVIIPMGYVK
NT seq
1557 nt
NT seq
+upstream
nt +downstream
nt
atggaacaatcaaaaagaaataaatctagagatgctgctcggcagcgtagaggaaaacaa
aatggagagtttggtgaattggcttgtcagctgccacttcctaaaggagttgctgaaaat
cttgatcgactttgtacaatgcgtttatcaaatagctttataaagattaagcatgtatta
aagcaaattataggaactataacaccagaacaaaatacttctagttattttaatgcatgc
attccacaggctcttggaggctttatttttgttttaaataaagatggtcaatgtttgtat
atttctccaaatattaaagaaaatcttggattaaaccaattagatatgatgggtgacagc
ttttataagtatgtgcaaccatgtgatcaagctacattagctgaacaaataggtggtcaa
gttcctcttgaagatatggaaatatttgatggcttgttctgttctgaggcagcaccatgt
ttgcagaatcccaagaaaaaaatttgtgatgagctcaagaatagtccatatcgatcattc
ttcttgcgtatgaagtcgactctgaccagtcgtggtaaaaatgtcaatataaatgcatca
acttacagagttgtgcattgcactgggacaattaaaaactataaaacaaaactcgatcta
aatgaaggtttcactcagtgtttacttgcaattggtaaccccttattgacttctacatca
gttgagtttcctatagatagaaaaacatttatcagcaagcacagccttgacatgaaaata
tttgaaatggataacataacaagttccattcttggatacagtgacaaggagatgcttggt
tattcttggtatatctacattcacttatgtgatactgatgtggtaaaagcttgtcatgaa
acactattgaagaaaggacaatcggtgagcgcatattatcgtgtattacatttaaatgga
gggtggctatggttacaaactatcggaaatgtagtctatttagaatcaaatggtcaacca
caatatatcttttgcatgcatactgtagtgagtggtctcgaggctgaaggaactgtatta
tctacaaaacaactcgatgtttctgtgaagcgcaagcacgaaatcaacaatgtgaacgtt
aaaaaaagttcaattaaagaaataaaggttagcaatacggatctagagagttatgtgcca
gtaaagatattcaaagaaaaagttgtcgaaaaaagtaatcctcattatttgcctgattct
ccgcgaccgccgccgccaccacaactttctaacaatatggatgatgaactttctgacagt
gatattccagaccttgagtttcttgactacgatgatgtgggtgtaccattaacagaaaat
ttcgtttttgatagatcgccatatgttccatccccaatggcggatgtaaaactaaaagtg
gatctcgatgacatgttaaaaataacaccaaaagttccatttgattgcatcgagtctttt
ccttttgacgacaaagacacaaattgcgtaattataccaatgggttatgttaaatga
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