Hydra vulgaris (swiftwater hydra): 100204705 Help Entry 100204705         CDS       T01080                                  Name (RefSeq) rootletin   KO K16469   rootletin Organism hmg  Hydra vulgaris (swiftwater hydra) Brite KEGG Orthology (KO) [BR:hmg00001]  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    03037 Cilium and associated proteins [BR:hmg03037]     100204705 Cilium and associated proteins [BR:hmg03037]  Primary cilia and associated proteins   Other primary cilia associated proteins    100204705 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Rootletin ERM_helical GAS Motif Other DBs NCBI-GeneID:  100204705 NCBI-ProteinID:  XP_047137825 LinkDB All DBs Position 8:complement(13694187..13737907) Genome browser AA seq 2150 aa AA seqDB search MSFLDEKPPSDKSNDEDLPSLQSIIKRLEENEIKIPTKETLTNSEIPISMRDVTKVMSND VADAEKLIEENRLLYDDLLWSQNQLSLMKSEKSSLNSSKLPLYNDYMRMQSPVNSSYNNE NVRIQSPVSSFLSVENYILQINQLKQKIEDDHSNYKRKLHAYQEGQEKQSELIQKLQSKV QQYKMRNNELEMIANDKSNELEELRDKLQVTIASAKEYEKRLMEFDEDRSNEMENYAVQL EEEKQRNVNLQHANNMLHEQLEQATSANSHLSLETQKLSIELTKSCDELKHRDSEEENYF TEEHRKLVNLWNSIDSFRSAFNIVKLETQKDLLQVKAEFSKSARTIQAASMELEKTQRGL STVNQNTLLEEQAQREKVESQLREKIRELIDLQATLNKMKDHYEIRLDEITNSLTESKAR VDEQQKTIGLYKNKLKQLGIEYSETTENWKNDSQVNIEAMREEIEVLQSTLYELANCILE DADSTSSSLDYLLSKVEAEIDTDNDIDPSSKVKDIVQSSSPLIHVKLRSKSPVRARSPAY IQSLVAGSQSAMKKRQLQLQEQKRQLDIAVMDKQSFKRQFDISSSKLQQLNTAYDELKTD HLSLQSKYNKSNEDCNKYRNQLQIIEKEKQSFENMKNHLQNKVEEYEHKVNQLENQISYL KNNHENESEKKDSIMNEVSRLSNESQQLQKVIADLECKQSMLKEECVDLKEKLNRASLEK DVFLQENTHLQELLKSAQDERDDLENDVNKLKMDEVQLKDALVKLQTLNEALGEDKLNLG KIVLQVEAERDQIYKEKENLESEKLGLKEELLRIDKEKASLESERKGILEAINLNDATIE KLEEQLQEACFSKNKMNDTLNNVVREKEVSQYELVSLRLEVERLQNSLNRLLKEKEELTK ENSLISVKLSGNLKEIQALTESNALLKSEKETLESYLYELQHLVGKLEVRKEQLETSNHE VHLAKDTIAVELAHLKKENEIQTAKLNKENELLQQKLSLLERERDLSLSRLKEQHEDQIH QLAMDKDKMLTAKKEEHLIVINELKEEMEDYQIKAERDRLALINEVASIQRERDDLLLQA EAEKQAHLRAADSEKSLLVEKITKLKDDLDSANEELEILKRDLEERAAREKDLLNDSAHE IEKCKENLEETVNLYEAKLKDLVDSHDKLLKNKEELYGELSNAKFQLKILNENHEAAQKE CKELTNKVIDLNGKLDDASKHTLELKRSLKDAEVEKMLVLSGAEELREAFKQVESEKMTY KKNYEDSKKLASILDDTNVMQTRETDDLRHMISELETARQETRKEVQQLQNRVRLLDTEC VKCKKDLNIAKDQLNKTNSLLEEERLDLINTKNKLRECETSKDAIKAEMQALATKAREHN DEFGLREKDLLMALEDARQTEVKVYDKMRQLENLLDVSNQEKSDLKLKLSSVEGRNLGLE DQLTKLEALKNDLDSKLSNVYSALRRTLGIKPNQSINSTPSPQPNVTPKRRAPYARNRVY LQSSHDQSSEFDETPPSKNVSFDTSNEMDPEYVRNSLREFAQKFKDLEHERDEALINIGG LQRQLENLEMDRLDYENRLSVLQKSLQDTAEDKRGADGRLSSAQTALLLQEETIRRLERE RKTAEEKFQILESTVAQLETEKRTLKEKYMKAHKHKLKYEQEAEAMRSQIDGAESRITRT DLKKKSLEGDIDRLRSQLHDAENEKHATKQRLEILQRTCKDLELKSSSLQLTVDRLNMSL SKSTDQEHLLQSKVTELSAIISEKQSVVVSLQDKLQQTERIIVSNEQEKQAAFEKVENLK KQLLENKKLNDLQNDKILNLRNEIANLESTRINLESELRQVQTLLQKNKVGDEELLNKLE KFKEEKKNLQERLAQQQRLLAQGEQEKRDIEKNSVKVEKEKRALKATVEQLEKEKFLIDE ELIQLKNDQTESDKIRSNYEQTINSLRIQLSQLQETLEEKELQHNKKLASMSARHRDDLM KEIERMKSSQQSLDRTYDARERAHKQRIRGLEDQINTLKDQFAKEIQQKQSFINRTTQKN EEIQEIRQKINSSINEVARNADPRILDRESQKLDTTYDNYNDFSAVLTASTPYSNRMKVS PFIIDKYSSMTPTTDPGLMSSRIDLPITTEARNLSNTTFVSPIRKNLGKK NT seq 6453 nt NT seq  +upstreamnt  +downstreamnt atgagtttcttagatgaaaaaccacctagtgataaaagcaacgatgaagatcttccaagt ttacaatctattatcaagaggctagaagaaaatgaaattaaaattccaaccaaagaaact cttaccaactcagaaatacctatttctatgcgcgatgtcactaaagtaatgtctaatgat gtagctgatgctgaaaaattgattgaagaaaacaggctattgtatgatgatttactttgg agtcaaaatcagctttctttaatgaagagcgaaaaaagctctttaaactcatcaaagttg cctctttataatgattatatgagaatgcaatctccagttaattcttcgtataataatgaa aatgttaggatacagtctcctgttagttctttcttgtctgttgaaaattatattcttcaa attaaccagctgaagcaaaaaattgaggatgaccactcaaattataagcgaaagttgcat gcataccaagagggacaagagaagcaatctgagttaattcaaaaacttcaaagcaaagtt caacagtacaaaatgcgaaacaatgaactagagatgattgcaaatgataaatcaaatgag ttagaagaattgcgtgataagcttcaagttactatagctagtgcaaaggagtatgagaaa cgtctgatggaatttgatgaagaccgaagtaatgagatggagaactatgcagtgcaactt gaagaagaaaagcaacgaaatgttaatctgcaacatgccaataatatgttacatgagcaa ttagaacaagctacatcagcaaacagtcacctctctttagaaacacaaaaactttcaata gagttaacaaaatcatgtgatgaactgaagcatcgtgattctgaagaagaaaattatttt actgaagaacataggaagctggtgaatctgtggaattcaattgacagttttcgatcagca tttaacatagtcaaattagaaactcaaaaagacttgctgcaagtaaaagcagaatttagt aaatctgcaagaaccatacaagcagcctcaatggaattagagaaaacgcaacgtggattg tcaacagttaatcaaaatactcttcttgaggagcaggctcaacgagaaaaagttgaatcg caattgcgtgaaaaaatacgagaactaatagatttgcaagctactttaaacaaaatgaaa gaccattatgagattaggctagatgagatcacaaattctttaactgaatccaaagcaaga gtagatgagcaacagaagactatcggcttgtataaaaataagctaaaacaattgggtatt gaatattcagaaacaaccgagaactggaaaaatgatagccaagttaatatagaagcaatg cgtgaagaaattgaagttttgcaaagtacattgtatgaacttgccaactgtattttagaa gatgcagatagtacatctagttctcttgattatttgctttcaaaagttgaagctgaaatt gatactgataatgatatcgatccttcatcaaaagtaaaagatatagttcagtctagttct ccgttgattcatgtgaagttaagatctaaatcaccagtgcgtgctcgttcaccagcttat atacaatcactggtagctggttctcaatcagctatgaaaaagcgccagctacaactgcaa gaacagaaaagacaattagatatagcagttatggataaacaaagctttaaaagacagttt gacataagttcatctaagttgcagcagttaaacacagcatacgatgaattaaaaactgat catttatcattacaatcaaagtacaataaaagtaatgaagattgcaataaatacagaaat caattacaaattattgaaaaggaaaaacagagttttgaaaacatgaaaaaccacctgcag aataaagttgaagaatatgaacataaagttaatcaattagaaaatcaaataagttatttg aaaaataatcatgagaatgaaagtgaaaaaaaggactccattatgaatgaagtttcacgt ttgagtaatgaaagtcaacaacttcaaaaggttattgcagacttggagtgcaaacagtca atgttaaaagaagaatgtgttgatttaaaagaaaagttaaatagagcttcacttgaaaag gacgtttttctacaagaaaacactcatttgcaagagttgctgaaatcagctcaagatgaa cgtgacgacttagaaaatgatgttaataaacttaaaatggatgaagttcaattgaaagat gcattggtcaaattgcagacattaaatgaagctcttggtgaggataaacttaatcttgga aagatagttcttcaagttgaagctgaaagagatcaaatttacaaagaaaaagaaaatctt gaatcagaaaagttaggcttaaaagaggaattgcttcgaatcgataaagagaaagcatca ctagaatcagagcgaaaaggaatacttgaagcaataaacctaaatgatgctacaatagaa aaactagaggagcaattacaagaggcttgtttttcaaaaaacaaaatgaatgacactttg aacaatgttgttagagaaaaagaagtatctcagtacgagttggtgtcactgcgacttgaa gtggaaagattgcagaacagtcttaaccgtctattgaaagaaaaggaggaactgaccaaa gaaaactcgcttatttcagtaaaattatctggtaatttaaaagaaattcaagcactgaca gagtcaaatgctttacttaagtctgaaaaagaaacattagagtcatatctttatgagttg cagcaccttgtaggaaaacttgaagtacgtaaagagcaacttgaaacaagcaatcatgaa gtccatctggcaaaagatactatagctgttgagttagctcacctaaaaaaagaaaatgaa atacaaacagcaaagttaaataaagaaaatgagcttttgcagcagaaattatctttgctt gagcgtgagcgagacctctcattaagtcggctgaaagaacagcatgaagaccagatccac caacttgcaatggacaaagacaaaatgttaacagcaaaaaaagaggaacatttgattgtc ataaatgagcttaaagaagagatggaagattatcaaattaaagctgagcgtgatcgttta gctttgataaatgaagttgcaagcattcaaagggaaagagatgatctacttttgcaagct gaagcagaaaaacaagcacacttaagagcagcagatagtgaaaaatcacttcttgttgaa aaaataacaaagcttaaagacgatttggattcagcgaatgaagaattagagatcttgaaa agagatcttgaagaaagagcagcaagagaaaaggatttactcaatgatagtgcacacgag atagaaaaatgcaaagaaaatctagaagaaactgtgaatctttacgaagctaagttaaaa gatcttgttgacagtcatgataagcttctcaaaaataaagaagagttatatggagagttg tccaatgcaaagtttcagcttaagattttaaatgaaaatcacgaagcagcacaaaaggag tgtaaagaattgacaaacaaggtaattgatttaaatggaaaattagacgatgcaagcaaa cacacattagagttgaagaggtctcttaaagatgctgaggtagagaaaatgctagtactt tcaggtgctgaagagttacgagaagcttttaagcaagtagaaagtgagaaaatgacatac aaaaaaaattatgaagatagcaaaaaattagcttctattttggatgatacaaatgttatg cagaccagagaaacagatgatttgcgtcatatgatcagtgaacttgagacggcaagacaa gaaacaagaaaagaagttcaacaattgcagaaccgggtgcgtctgttagatactgaatgt gtaaaatgtaagaaagacttaaatattgcaaaagatcaacttaataaaacaaattctctt cttgaagaagaacggcttgatttgataaacacaaaaaataagcttagagaatgtgaaaca tctaaagatgccattaaagcagagatgcaggcactagccacaaaggctagagagcataat gatgaatttggacttagagagaaagatctacttatggctttagaagatgctcgtcaaaca gaagtaaaagtgtatgacaaaatgagacaactggaaaatcttttagatgtatcaaatcaa gaaaaaagtgatttgaagttaaagttatcaagtgttgaaggtcgtaatttgggattagaa gaccagttaacaaaacttgaagctcttaaaaacgatttagactcaaaattatcaaatgta tactcagctcttagaaggacactgggtattaagccaaatcaatcaataaacagtacacct tcgccccagccaaatgtcactccgaaacgtcgcgcaccttacgctcggaatagagtgtat ttacaaagctcacacgatcaaagcagtgaattcgatgagacaccacccagtaaaaatgtc agctttgatacttcgaatgaaatggatcccgagtatgttcgtaactctttacgtgagttt gcacaaaaatttaaagatttagagcatgagcgcgatgaagctttgataaatattggcgga cttcagcgtcaactagaaaatcttgaaatggatcgacttgattatgaaaatcgtctaagc gttttacagaaaagtcttcaagatacggcggaagataaacggggtgctgacggacgttta agtagtgctcaaacagctttacttcttcaagaagaaaccatccgaagacttgaacgagaa cggaaaacggcagaagaaaaatttcaaatattggaatccaccgttgctcaactggaaact gaaaaacgcactcttaaagaaaaatatatgaaagctcataagcataaactaaaatacgag caagaagctgaagcaatgcgttcacaaattgatggcgctgagtcgcgcatcacgcgaaca gatttaaagaaaaaatctcttgaaggagatattgatcgtcttcggagtcagttacacgat gctgaaaatgaaaagcatgctacaaaacaaagattagaaattcttcaacgaacttgtaaa gaccttgagctaaaatcttcgtctcttcaattaaccgttgatcgcttaaatatgtcatta tcgaaaagcactgatcaagagcatcttcttcaatctaaagttacagaactttctgccatc attagcgaaaaacaatctgttgttgtttcactgcaggataagttgcaacagacagaacgc atcattgtatcaaacgagcaagaaaaacaagccgcattcgagaaagtcgaaaacttaaaa aaacaattacttgaaaacaaaaagttaaacgacttgcagaacgataaaattttgaattta cggaatgaaatagccaatttagagagtacgcgtattaatcttgaaagtgaacttcggcaa gttcagacattgctacagaagaataaagtaggagacgaggagctactcaataaattagaa aaattcaaggaagaaaaaaaaaacttgcaagagcgtcttgctcaacaacaaagacttctt gctcaaggagaacaagagaaacgtgatattgaaaaaaacagtgttaaagttgaaaaagaa aagcgtgctttgaaggcaactgttgagcagctggaaaaagagaaatttcttattgacgag gagttgattcaattgaagaatgatcaaactgaatcggataagatccgttcgaattacgaa caaactataaactctctgcgtatacaactatcgcagctgcaagaaactctggaagaaaag gaattacaacataataaaaaattagcgtcgatgtctgcgcgtcatcgagatgatctaatg aaagaaatagagagaatgaagtcttcccagcagagtttagatcgaacgtatgatgcgcgt gaacgtgcgcataaacagcgtatacgaggtttggaagaccaaataaatactttaaaagat caattcgcaaaggagattcagcaaaaacaatctttcattaaccgcacaactcagaagaat gaggaaatccaagaaattcgtcaaaagataaattcttcgataaacgaagttgcacgtaac gccgatccgcgcattttagatcgtgaatctcaaaagttagacacaacttacgacaactat aacgatttttctgctgtgctgactgcatccactccttattcaaacagaatgaaagtctct ccatttataatagataagtacagtagtatgacgccgacaactgatcctggactaatgagt tctcgaatcgatcttcccattacaacagaagctcgtaaccttagcaacacaacttttgtt tctcctattcgaaaaaatcttggaaaaaaataa

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