Hydra vulgaris (swiftwater hydra): 100204840
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Entry
100204840 CDS
T01080
Name
(RefSeq) E3 ubiquitin-protein ligase SIAH1A
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
hmg
Hydra vulgaris (swiftwater hydra)
Pathway
hmg04120
Ubiquitin mediated proteolysis
hmg04137
Mitophagy - animal
hmg04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
hmg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
100204840
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
100204840
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
100204840
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
hmg04121
]
100204840
Enzymes [BR:
hmg01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
100204840
Ubiquitin system [BR:
hmg04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
100204840
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sina_TRAF
Sina_ZnF
Sina_RING
zf-C3HC4_3
Motif
Other DBs
NCBI-GeneID:
100204840
NCBI-ProteinID:
XP_047124540
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All DBs
Position
15:complement(19037184..19051046)
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AA seq
287 aa
AA seq
DB search
MSKMSNLMRPVGTASPNAIKGDVPMNIVSATMNISSNPDLASLFECPVCFDYVLPPIFQC
SSGHLLCSNCRPKLTICPSCRGPLGSIRNLAMEKVANTVLFPCRYSSSGCNVTLPHTAKI
EHEDSCECRPYVCPCPGASCKWSGTLDGVMPHLMVSHKSITTLQGEDIVFLATDINLPGA
VDWVMMQSCFGQHFMLVLEKQEKFEGHQQFFAVVQLIGSRKQAENFAYRLELNGQRRRLA
WEATPRSIHDGISAAISNSDCLVFDTSIAQLFADNGNLGINVTISLC
NT seq
864 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaaaatgtcaaatttgatgcgaccagtaggcactgcaagcccaaacgcaataaag
ggagatgttcctatgaacatagtttctgcaacaatgaatatttcttctaatccagatcta
gcaagtttgtttgaatgtcctgtttgctttgactatgttctgcctccaatatttcaatgt
agtagtggtcatcttttatgttcaaattgtcgccctaaattaacaatatgcccgagttgt
cgtggacctcttggaagcattagaaatttagctatggaaaaagtagctaatacagtactt
tttccatgtcgttactcatcttctgggtgtaatgtcactttaccccacacagcaaaaatt
gaacatgaggattcttgtgagtgtcgaccatatgtttgcccttgtccaggtgcatcctgt
aaatggtcaggaacattagatggagtaatgcctcacctaatggtatctcataagtctatt
actactctacaaggtgaagatatagtatttttagctacagacataaatttaccaggcgct
gttgattgggtaatgatgcaatcgtgttttggacaacatttcatgctcgtgcttgaaaaa
caggaaaagtttgagggacatcaacaattttttgctgttgtccaattaattggttctaga
aaacaagcagaaaatttcgcttatcgattagagttaaatggacaacgtcgcagactagct
tgggaagctacacctcgtagtatacatgatggtatctctgctgcaatatcaaatagcgat
tgcttagtatttgataccagcattgcgcagttgtttgcagataatggaaacttgggaata
aatgttacaatatctctttgttga
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