Hydra vulgaris (swiftwater hydra): 100204875
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Entry
100204875 CDS
T01080
Name
(RefSeq) WD repeat-containing protein 76
KO
K24755
WD repeat-containing protein 76
Organism
hmg
Hydra vulgaris (swiftwater hydra)
Brite
KEGG Orthology (KO) [BR:
hmg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
hmg04121
]
100204875
03036 Chromosome and associated proteins [BR:
hmg03036
]
100204875
03400 DNA repair and recombination proteins [BR:
hmg03400
]
100204875
Ubiquitin system [BR:
hmg04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
100204875
Chromosome and associated proteins [BR:
hmg03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
100204875
DNA repair and recombination proteins [BR:
hmg03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Other MMR factors
100204875
DSBR (double strand breaks repair)
Other DSBR factors
Others
100204875
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WDR55
WD40
WD40_WDHD1_1st
WD40_Prp19
Beta-prop_RIG_2nd
Beta-prop_EML_2
Beta-prop_EIPR1
Beta-prop_NUP159_NUP214
Beta-prop_EML
Beta-prop_WDR90_POC16_2nd
Beta-prop_HPS5
Beta-prop_WDR75_1st
Beta-prop_TEP1_2nd
WD40_RFWD3
WD40_MABP1-WDR62_2nd
EIF3I
Beta-prop_LRRK2
MIOS_WD40
Beta-prop_IFT140_1st
Beta-prop_WDR19_1st
ANAPC4_WD40
WD_LRWD1
Beta-prop_Vps41
WD40_2
WD40_like
Beta-prop_WDR11_2nd
DUF7045
Beta-prop_KIB1-4
Motif
Other DBs
NCBI-GeneID:
100204875
NCBI-ProteinID:
XP_047138471
LinkDB
All DBs
Position
8:29086370..29117878
Genome browser
AA seq
528 aa
AA seq
DB search
MPKVRNVRTKAVRSCINGNPYQTKKPNNQPTDVISIKKESNGCLKTDCDIKSDESDYEEF
DATQYKLSEYESTRIENIHRNKQILQSFNILEAKEQYNFTKPRTEKKKSFDVGLKRILNE
KIPLPRRVSLRIKNLPVSYTDLPPIEPSRQNTYYSPRRAPKLSMQAINISEDHGKSAMES
WSKLQNSKAELLSNNVKKFQEETLKLDIKYAAKVTKDRIYSIAIHPSCDKILACAGDKSG
NVGIWDVNSTQGKSTEVFLFSPHTQPINCLKFCPTDISKLYSCSFDGSVRVADFSSQQFS
EVFSIEENTDRFNYFDWPANKSNTLLVASSNGNVLLFDTRTSCIEQSYEIFQKSVRCVDF
HPQNEHLFAASSYDGKLATWDLRNLKKDNNKFLSMFQASKTTSTCFFSPGAGDKLLLTSQ
DDYLRVFNVDQVGKIDSPRWQVKHDNFTGRWLTTFRACWDPKTENCFVCGSMERPRQIDM
FGCMENGLLSHFSITSEEQTTVASVNAFHSSQNILVSGNASGKIYVWM
NT seq
1587 nt
NT seq
+upstream
nt +downstream
nt
atgcctaaagtaagaaatgtcagaactaaagctgtaagatcttgcatcaatggaaatcct
tatcaaaccaagaaaccaaataatcagcctacagatgtgataagtattaagaaagaatca
aatggttgtttaaaaacggattgtgatataaaaagtgatgagtcagattacgaagaattt
gatgcaactcaatacaaactttctgaatatgaatcaacaagaatagaaaatattcatcga
aacaagcaaatattgcagagtttcaatattttagaggctaaagaacagtataattttaca
aaaccaagaacagaaaaaaaaaagtcatttgatgttggtcttaagaggatattaaatgaa
aaaatccctttacctcgcagagtgtcgcttcgtattaaaaacctacctgtttcttatact
gatttaccacccatcgaaccttccaggcaaaacacatattattctcctcgcagagctcca
aagctttctatgcaggctattaatatttcagaagatcatggtaaatcagcaatggaatct
tggtcaaaacttcagaattcaaaagcagaactattaagtaataatgttaaaaagtttcaa
gaggaaactctgaaattggacatcaagtatgcagctaaagtaacaaaagatcgtatttat
tcaattgcaatacacccttcatgtgataaaatcttagcatgtgctggcgacaaatcagga
aatgttgggatttgggacgtgaactcaactcaaggaaaaagtactgaagtttttttattt
tctcctcatacacaaccaatcaattgtttgaaattttgtcccacagatatttcaaaactt
tattcatgcagttttgatggtagtgttagagttgctgatttttcatcacaacagttttca
gaggtttttagcattgaagaaaacactgataggtttaattattttgattggccagcaaat
aagtcaaatacattattggttgcttcaagcaatggcaatgtgttactttttgatacacga
acaagttgtattgaacagagttatgaaatctttcagaagagtgtacgctgtgttgacttc
cacccccaaaatgagcatttgtttgctgcttcttcttatgatggaaaacttgctacatgg
gatttacgtaatctcaaaaaagataacaacaaatttctttcaatgttccaagcttctaaa
acaacttctacatgttttttttctccgggagctggagataaattattacttacatcacaa
gacgattaccttagagtttttaatgttgatcaagttggcaaaatagattctccaagatgg
caagtaaaacacgataactttactgggaggtggcttacaacatttcgagcatgttgggat
ccaaaaactgaaaactgttttgtttgtggaagtatggaaaggccaagacagattgatatg
tttggatgtatggaaaatggattattatctcacttttcaataaccagtgaagagcaaacc
acagtggcatcagtaaatgcttttcattcatctcaaaatattcttgtatctggtaatgca
agtgggaaaatctatgtatggatgtaa
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