Hydra vulgaris (swiftwater hydra): 100205184
Help
Entry
100205184 CDS
T01080
Name
(RefSeq) replication factor C subunit 4
KO
K10755
replication factor C subunit 2/4
Organism
hmg
Hydra vulgaris (swiftwater hydra)
Pathway
hmg03030
DNA replication
hmg03410
Base excision repair
hmg03420
Nucleotide excision repair
hmg03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
hmg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
100205184
03410 Base excision repair
100205184
03420 Nucleotide excision repair
100205184
03430 Mismatch repair
100205184
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hmg03032
]
100205184
03036 Chromosome and associated proteins [BR:
hmg03036
]
100205184
03400 DNA repair and recombination proteins [BR:
hmg03400
]
100205184
DNA replication proteins [BR:
hmg03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
100205184
DNA Replication Termination Factors
ELG1-RFC complex
100205184
Chromosome and associated proteins [BR:
hmg03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
100205184
DNA repair and recombination proteins [BR:
hmg03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
100205184
Check point factors
HRAD17(Rad24)-RFC complex
100205184
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
RCF1-5-like_lid
AAA_assoc_2
SLFN-g3_helicase
AAA_30
DNAX_ATPase_lid
AAA_16
AAA_11
Rad17
AAA_22
DUF815
ResIII
AAA_19
AAA_24
Mg_chelatase
ATPase_2
MCM
AAA_7
Viral_helicase1
AAA_3
AAA_5
RuvB_N
bpMoxR
Motif
Other DBs
NCBI-GeneID:
100205184
NCBI-ProteinID:
XP_047130593
UniProt:
A0A8B6XU13
LinkDB
All DBs
Position
4:30030473..30076464
Genome browser
AA seq
349 aa
AA seq
DB search
MSDFFSINKKKPKVAESSVLKSNQNLPWVEKYRPKTIDDVAYQEEVVNVLRSTITGNNFP
NLLFYGRPGTGKTSTILAVCKQLFGHDLYKSRVLELNASDERGIQVIREKVKNFASQSVS
SFKVDGTPCPPFKVVILDEADSMTTSAQAALRRTMERQTKTTRFCLICNYVSRIIEPITS
RCAKFRFKELSSNAIYEQLKYISRMEAVKIEEEALEQLIESSDGDMRKAITYLQSAHRLK
LGEIILANDIFEMTGKVPKTMVADIMKACSSGSFEKLDKQVKLMMTGGYSASQLITQLHD
EIISLLTINDKQKSIILEKLAIVEKCLCDGADEYLQIMAIGTVIMESVR
NT seq
1050 nt
NT seq
+upstream
nt +downstream
nt
atgagtgattttttctctataaacaaaaagaagcctaaagttgcagaatcttcagtttta
aaaagtaatcaaaatttaccatgggtcgagaaatatcgacctaaaactatagatgacgtt
gcttaccaggaagaagtggtaaatgttttacgaagtactataacaggaaataattttccc
aatttattgttttatggaagacctggaactggaaagacttcaacaattttagctgtttgc
aagcagttatttgggcatgatttatacaaaagtagagtattggaattgaatgcatcagat
gaacgcggtatacaggtaattcgagagaaagtaaaaaattttgccagccagtctgtttct
tctttcaaagtagatggtacaccttgtcctcctttcaaagttgtgattcttgatgaagca
gactcaatgacaacaagtgctcaagcagctttaagacgtaccatggagcgtcaaacaaaa
acaacaagattttgtctaatctgcaactacgtcagtcgaattatagaaccaataacatcg
cgctgtgcaaaatttcgtttcaaagagttatcatcaaatgcaatttatgaacaattaaaa
tatatttcacgtatggaggcagttaaaattgaagaagaggctttggaacagctaattgaa
tcttcagatggagatatgcgaaaggcaatcacatatttacaaagtgctcatcgtctaaaa
ttaggagaaataattttggctaatgatatttttgaaatgactggtaaagttcctaaaact
atggttgctgatataatgaaagcatgttcttctggatcttttgaaaaacttgataaacaa
gttaagttaatgatgactggtggatattctgcatctcagcttattacccagttacatgat
gaaatcataagtcttttaacaattaatgacaaacaaaaatccatcatactagaaaagctt
gcgattgtcgagaaatgtctctgtgacggtgctgacgaatacttgcaaattatggcgatt
ggtacagttataatggagagtgttcgataa
DBGET
integrated database retrieval system