KEGG   Hydra vulgaris (swiftwater hydra): 100205184
Entry
100205184         CDS       T01080                                 
Name
(RefSeq) replication factor C subunit 4
  KO
K10755  replication factor C subunit 2/4
Organism
hmg  Hydra vulgaris (swiftwater hydra)
Pathway
hmg03030  DNA replication
hmg03410  Base excision repair
hmg03420  Nucleotide excision repair
hmg03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:hmg00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    100205184
   03410 Base excision repair
    100205184
   03420 Nucleotide excision repair
    100205184
   03430 Mismatch repair
    100205184
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:hmg03032]
    100205184
   03036 Chromosome and associated proteins [BR:hmg03036]
    100205184
   03400 DNA repair and recombination proteins [BR:hmg03400]
    100205184
DNA replication proteins [BR:hmg03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    100205184
  DNA Replication Termination Factors
   ELG1-RFC complex
    100205184
Chromosome and associated proteins [BR:hmg03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    100205184
DNA repair and recombination proteins [BR:hmg03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     100205184
  Check point factors
   HRAD17(Rad24)-RFC complex
    100205184
SSDB
Motif
Pfam: Rep_fac_C AAA DNA_pol3_delta2 RCF1-5-like_lid AAA_assoc_2 SLFN-g3_helicase AAA_30 DNAX_ATPase_lid AAA_16 AAA_11 Rad17 AAA_22 DUF815 ResIII AAA_19 AAA_24 Mg_chelatase ATPase_2 MCM AAA_7 Viral_helicase1 AAA_3 AAA_5 RuvB_N bpMoxR
Other DBs
NCBI-GeneID: 100205184
NCBI-ProteinID: XP_047130593
UniProt: A0A8B6XU13
LinkDB
Position
4:30030473..30076464
AA seq 349 aa
MSDFFSINKKKPKVAESSVLKSNQNLPWVEKYRPKTIDDVAYQEEVVNVLRSTITGNNFP
NLLFYGRPGTGKTSTILAVCKQLFGHDLYKSRVLELNASDERGIQVIREKVKNFASQSVS
SFKVDGTPCPPFKVVILDEADSMTTSAQAALRRTMERQTKTTRFCLICNYVSRIIEPITS
RCAKFRFKELSSNAIYEQLKYISRMEAVKIEEEALEQLIESSDGDMRKAITYLQSAHRLK
LGEIILANDIFEMTGKVPKTMVADIMKACSSGSFEKLDKQVKLMMTGGYSASQLITQLHD
EIISLLTINDKQKSIILEKLAIVEKCLCDGADEYLQIMAIGTVIMESVR
NT seq 1050 nt   +upstreamnt  +downstreamnt
atgagtgattttttctctataaacaaaaagaagcctaaagttgcagaatcttcagtttta
aaaagtaatcaaaatttaccatgggtcgagaaatatcgacctaaaactatagatgacgtt
gcttaccaggaagaagtggtaaatgttttacgaagtactataacaggaaataattttccc
aatttattgttttatggaagacctggaactggaaagacttcaacaattttagctgtttgc
aagcagttatttgggcatgatttatacaaaagtagagtattggaattgaatgcatcagat
gaacgcggtatacaggtaattcgagagaaagtaaaaaattttgccagccagtctgtttct
tctttcaaagtagatggtacaccttgtcctcctttcaaagttgtgattcttgatgaagca
gactcaatgacaacaagtgctcaagcagctttaagacgtaccatggagcgtcaaacaaaa
acaacaagattttgtctaatctgcaactacgtcagtcgaattatagaaccaataacatcg
cgctgtgcaaaatttcgtttcaaagagttatcatcaaatgcaatttatgaacaattaaaa
tatatttcacgtatggaggcagttaaaattgaagaagaggctttggaacagctaattgaa
tcttcagatggagatatgcgaaaggcaatcacatatttacaaagtgctcatcgtctaaaa
ttaggagaaataattttggctaatgatatttttgaaatgactggtaaagttcctaaaact
atggttgctgatataatgaaagcatgttcttctggatcttttgaaaaacttgataaacaa
gttaagttaatgatgactggtggatattctgcatctcagcttattacccagttacatgat
gaaatcataagtcttttaacaattaatgacaaacaaaaatccatcatactagaaaagctt
gcgattgtcgagaaatgtctctgtgacggtgctgacgaatacttgcaaattatggcgatt
ggtacagttataatggagagtgttcgataa

DBGET integrated database retrieval system