Hydra vulgaris (swiftwater hydra): 100205318
Help
Entry
100205318 CDS
T01080
Name
(RefSeq) transitional endoplasmic reticulum ATPase
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
hmg
Hydra vulgaris (swiftwater hydra)
Pathway
hmg04137
Mitophagy - animal
hmg04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
hmg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
100205318
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
100205318
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hmg03019
]
100205318
03009 Ribosome biogenesis [BR:
hmg03009
]
100205318
04131 Membrane trafficking [BR:
hmg04131
]
100205318
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
hmg04147
]
100205318
Messenger RNA biogenesis [BR:
hmg03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
100205318
Ribosome biogenesis [BR:
hmg03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
100205318
Membrane trafficking [BR:
hmg04131
]
SNARE
SNARE associated proteins
Others
100205318
Autophagy
Aggrephagy
Other aggrephagy associated proteins
100205318
Exosome [BR:
hmg04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
100205318
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
RuvB_N
AAA_16
CDC48_2
AAA_33
AAA_5
AAA_2
AAA_22
TIP49
AAA_14
RNA_helicase
NPHP3_N
AAA_28
nSTAND3
Mg_chelatase
Parvo_NS1
ATPase
AAA_17
AAA_7
AAA_18
IstB_IS21
ATPase_2
ABC_tran
AAA_24
DUF815
Viral_helicase1
ResIII
TsaE
Sigma54_activat
NB-ARC
Vps4_C
NACHT
KAP_NTPase
Zot
DNA_ligase_A_C
Motif
Other DBs
NCBI-GeneID:
100205318
NCBI-ProteinID:
XP_012554675
UniProt:
A0A8B7D913
LinkDB
All DBs
Position
14:complement(13969359..14001999)
Genome browser
AA seq
800 aa
AA seq
DB search
MTSTDEIATAILKSKAKPNRLMVEEAVTDDNSVVTMSAEKMEELQLFRGDTVLLKGKRKK
ETVCIVLSNEEAASNDKVGMNRVVRQNLRVRLGDIVSVQACPDVKYGKRIHVLPLDDTVE
GLTGSLFEVFLKPYFMEAYRPVCKGDLFQVRGGMRSVDFKVVETDPSPYCIVAPDTVIHC
EGEPIKREDEEESLNEVGYDDIGGCRKQMALIKEMVELPLRHPQLFKALGIKPPRGILLY
GPPGTGKTLMARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNSPSIIFID
EIDSIAPKREKTHGEVERRIVSQLLTLMDGLKQRSHVIIMAATNRPNSIDPALRRFGRFD
REVDIGIPDASGRLEILRIHTKNMKLDDEVDLEQIAAETHGYVGSDVASLCSEAALQQIR
EKMDLIDLEEETIDAAVLDSLAVSMDNFRFAMGATNPSALRETVVEVPTVTWSDIGGLEN
VKRELQELVQYPVEHPEKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKG
PELLTMWFGESEANVRDVFDKARMAAPCVLFFDELDSIAKSRGGSSGDGGGAADRVINQI
LTEMDGMGAKKNVFIIGATNRPDIIDSAILRPGRLDQLIYIPLPDELSRVAILKAALRKT
PIAKDVDLVYLAKVTVGFSGADLTEIAQRACKLAIRESIEKDIQREKQRADNPDINMDDD
EDPVPEIRRDHFEESMKFARRSVSDNEIRKYEMFAQTLHQSRGLGTNFRFPGSQQGATPT
SGGSTEPNRYAQDEEDDLYS
NT seq
2403 nt
NT seq
+upstream
nt +downstream
nt
atgacaagcactgatgaaattgcaactgccattctaaaatctaaagcaaaacctaacagg
ttaatggtagaggaagcagtcactgatgataattcagttgtgacaatgtcagcagaaaaa
atggaagaacttcagttgtttcgtggtgatacagtcctgcttaaaggcaaaagaaagaaa
gaaacagtatgtattgtcttatctaatgaagaagccgcaagcaatgataaagttggaatg
aatcgagttgtgcgacaaaaccttagagtaagacttggagatattgtaagtgtacaagct
tgtcctgatgttaaatatggaaaaagaattcatgtcctgcctttagatgatacagtagaa
ggtttaactgggagtctgtttgaagtatttttaaaaccatatttcatggaggcttatagg
cctgtgtgtaaaggagatttatttcaagttcgtggtggaatgcgatctgttgatttcaaa
gttgttgaaacagatccttcgccatattgtattgttgcacctgatacagttattcattgt
gaaggggagccaattaaacgagaagatgaggaggaatcgctaaatgaagttggttatgat
gacataggtggttgtagaaaacaaatggcactaattaaagaaatggtagagcttcctttg
cgccacccacaattgtttaaagcattaggtatcaaacctccaaggggaatcttgttatat
ggacctcctggtacaggaaagactctaatggctagggctgttgccaatgaaacgggagca
ttcttctttcttataaatggacctgagatcatgagtaaacttgccggtgaatcagaaagt
aatctaaggaaagcatttgaagaggcagaaaaaaattcaccatctattatatttattgac
gaaattgattcaattgcaccaaaacgtgagaaaacgcatggagaagttgagcggagaatt
gtttcacagcttttaacactgatggatggtttaaaacaaaggtctcatgttatcataatg
gcagcaacaaatcgtccaaatagtattgatccagctcttagacgatttggtcgatttgat
cgagaggttgatattggtattcctgatgcaagcggcagactagaaattcttcgtattcat
actaaaaatatgaaattagatgatgaagttgatttagagcaaattgctgcagagactcat
ggctacgttggatctgatgttgcatcactatgttcggaagctgcgctccaacaaattcgt
gaaaaaatggatcttattgatcttgaagaggaaaccattgatgctgctgttcttgattca
cttgctgtttcaatggataacttcaggtttgcaatgggagcaactaacccctcagcttta
agagaaactgttgttgaagtacctactgtaacatggagtgatataggaggacttgaaaat
gtaaagcgagaattacaagaacttgttcaatatccagtagagcatccagaaaagttttta
aagtttggtatgacgccttcaaagggtgtgttgttttatggccctccgggttgtggtaaa
actttgctggcaaaagctattgctaacgagtgtcaagctaactttatatcaataaaaggt
cctgaactgttgactatgtggtttggtgaatctgaagccaacgttagagatgtttttgat
aaggctagaatggcagctccctgtgtacttttttttgatgagttggattcaattgcaaaa
tctcgtggtggcagtagcggtgatggaggtggtgctgctgatcgagttataaatcaaatt
cttacagaaatggatggtatgggagcaaaaaaaaacgtttttataattggagccacaaac
agaccagatatcattgactcagctatacttcgacctggtcgacttgatcaacttatctat
attcctcttcctgacgagctttctcgtgttgcaattttaaaagctgctctgcgaaaaacg
cctatcgctaaggacgtagaccttgtatatttagcaaaagttacagttggcttcagcggt
gctgatctcacagaaatagctcagcgagcctgtaaattagccattcgtgaatcaatcgaa
aaagatatacaaagggaaaaacagcgtgctgataacccagatataaacatggatgatgat
gaagatcctgttcccgaaattcgccgtgatcactttgaagaatcgatgaaatttgccaga
cgatctgttagtgataacgagataagaaaatatgaaatgttcgcacaaactcttcatcaa
agtagaggtttaggaacgaactttagatttccgggcagtcaacaaggtgccacacctacc
tctggtggctctaccgaaccaaatcgttacgctcaagacgaagaagacgacttatatagc
tag
DBGET
integrated database retrieval system
