Hydra vulgaris (swiftwater hydra): 100205470
Help
Entry
100205470 CDS
T01080
Name
(RefSeq) E3 ubiquitin-protein ligase RNF170
KO
K15707
E3 ubiquitin-protein ligase RNF170 [EC:
2.3.2.27
]
Organism
hmg
Hydra vulgaris (swiftwater hydra)
Brite
KEGG Orthology (KO) [BR:
hmg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
hmg04121
]
100205470
Enzymes [BR:
hmg01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
100205470
Ubiquitin system [BR:
hmg04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
100205470
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C3HC4_3
DUF1232
zf-C3HC4_4
zf-C3HC4
zf-RING_UBOX
RING_XB3-XBAT31
zf-C3HC4_2
zf-RING_2
zf-RING_5
TerY_C
zf-ANAPC11
TRAF3_RING
Motif
Other DBs
NCBI-GeneID:
100205470
NCBI-ProteinID:
XP_012554262
LinkDB
All DBs
Position
13:<16198929..16208990
Genome browser
AA seq
249 aa
AA seq
DB search
LFEKHKQTKIMNDSLIEGISDSVLFSWLLSSVIVLAFLLWSKFHVRNQIIHPVHQDAVQA
VREHVIHGESNRQSRNGDDQCPVCIDRLHFAVETNCGHVFCCACMMAYWEQGAWIGAMNC
PICRQQINVLLPMFTNDEAVSNEFTIYNNKIHIYNRRFSGQPRSILEYILDAPVLVRHLW
RNFFTASGIVLLLRIRIIIFFCIVLLYLWMPFDIIPESVVGVLGFIDDVLFTLAIVLYVT
VLFRQSLAQ
NT seq
750 nt
NT seq
+upstream
nt +downstream
nt
ttatttgaaaagcataaacaaacaaaaataatgaatgattctcttattgaagggattagt
gacagtgtgttgtttagttggttactttcttctgtcatagttttagcttttctattatgg
tcaaagtttcatgttagaaatcaaattattcatcctgttcaccaagacgctgttcaagct
gtaagagaacatgtgattcatggtgaatcaaatagacaatccagaaatggtgatgatcaa
tgtcctgtttgtattgaccgcctgcattttgcagttgaaacaaattgtggacatgttttc
tgttgtgcttgcatgatggcctattgggaacaaggtgcatggattggtgctatgaactgt
ccgatttgtaggcaacagattaatgtacttcttcctatgtttactaatgatgaagctgtt
tctaatgagtttacaatttataataataaaattcatatatataatcgtcgcttctcagga
caaccaagatctatattggaatacattttagatgcacctgtccttgttcgacatttatgg
cgaaattttttcactgcatctggtattgtattacttcttcgtatcagaattattattttt
ttttgcattgtgcttttatacctttggatgccatttgatattataccagaatctgttgtt
ggagtattgggatttattgatgatgttctttttactttagcaatagttttatatgttact
gtattatttcgacaaagtcttgcacaataa
DBGET
integrated database retrieval system
