Hydra vulgaris (swiftwater hydra): 100205491
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Entry
100205491 CDS
T01080
Name
(RefSeq) protein transport protein Sec24D
KO
K14007
protein transport protein SEC24
Organism
hmg
Hydra vulgaris (swiftwater hydra)
Pathway
hmg04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
hmg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
100205491
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hmg04131
]
100205491
Membrane trafficking [BR:
hmg04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
100205491
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec23_trunk
Sec23_helical
Sec23_BS
zf-Sec23_Sec24
Gelsolin
Zn_ribbon_TOP3B
Motif
Other DBs
NCBI-GeneID:
100205491
NCBI-ProteinID:
XP_012556392
UniProt:
T2MFJ8
LinkDB
All DBs
Position
2:complement(22926339..22971325)
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AA seq
1162 aa
AA seq
DB search
MNRPPQLYQPYNPNPSQQQNYQTPLLQQQTNQMSNKMTPPQNLSPIPNYQNTGTLNSLSS
QNGGIVHSQEPFLANNVAKQMKEMQLNPQQPHGAFTQYRPPGQNLASGPSPNITPPRPLM
TQQPPIPPPPTHSLPQSVAAPVLGMPQQKFNESLSTTETLNVKSYASGNQIHANMPINQS
SQAFITTTTTMTNITNGPTMIAPPIGQPPQPVHSNSIGFPPSVSQPMNFSKNVGPPMTGQ
HISGNIPSTSLPPPMGHQPTIPYGTGQKMPSTMGQQIGMPPTINQRPVQNVGMPPLPGQQ
RGIAPMTGQPMGIPPFTGQQTGMQPLSGQTMGMSPIPNQQMGMPPMVGQHMPMPQSVGQP
HGNRQPSGINSPMSAPVGASQQPKKIDPNQMPNPIQVMKDDQAAFNEEVFLTSTRGKVPP
LVSTKCRIQDDGNCSPRYMRSSIYSMPCNQDMVKTSGIPIAIVTTPLAKIPDDENQIRYV
LHGAGGPVRCNRCKAYMNPFMQFIDGGRRFICNICNHSSEVPQDYFCHLDHQGRRVDMFE
RPELCFGSYEFIATVDYCKSGKLPSPPAFIFMIDVSYQSIQQGMVKILSEELRSRLENLP
KDVGMEESVIKVGFMTYSTQLHFYNVKGNLPQPQMMVVTDVEDAFVPLQDGFLVNYNEAK
DVINSFLDMLPEMFREARETEVILGPVIKCGVEALKSAGISGKLYIFHSSLPIAEAPGKL
KNREDRKLLATDKEKTILMPQGNFYMNLVKDCIDAGVSIDLFLFPNSYVDVATIGLMVTQ
TGGQVYRYSFFKEVTHGKQFSSDLKKNFERTVGFDAVMRLRCSTGLRPVEFFGSFVMNNT
TDVELASIDSEKAIAIEIKHDDKIPEDGVAYIQNALLYTSVSGQRRLRIHNMAFSTCSQL
PDLYRCCELDTIVNYLSKFALRQVLTSTPQAIKESLVQKCVQILACYRQHCATPSTSGQL
ILPECMKLLPLYVNCLIKSDVLAGGSEMSSDDRAFLMQACLSMGPASSASYFYPRVFALH
SLDLDHDDDIIPEQIRCLGEKFQENGVYLLENTISMFIWIGLQVNPQVLQDIFNVKSIGQ
LDVDMTQLPELDTPLSKRVRQIVEAIQSERQRFLKLTVVRQRDKLEPWFKHYIVEDTGFN
TSHLSYVDFLCHVHKEIRNILS
NT seq
3489 nt
NT seq
+upstream
nt +downstream
nt
atgaaccgacctccacaactatatcaaccatataatccgaatccgtctcaacaacaaaat
tatcagactccactgctacagcaacaaacaaatcaaatgtccaataagatgactccccct
caaaatttgtctcctatcccaaattatcagaatactggaactctaaatagtctttcatca
cagaatggtggtattgtgcattcccaagaaccatttttggcaaataatgttgcaaaacag
atgaaagaaatgcaattaaatcctcaacaaccacatggagcatttactcaatacagacct
ccaggtcaaaatttagctagtggaccgtcacctaatataacaccaccaagacctttaatg
acccagcaacctcctattccaccaccaccaactcatagtttaccacagtctgttgcggcc
ccagttttgggtatgcctcaacaaaagtttaatgagtcattgtcaacaactgaaacttta
aatgttaaatcttatgcttctggaaatcaaatacatgcaaatatgcctatcaatcaatca
agtcaagcatttattacaacgacaacaacaatgacaaatattacaaatggccctactatg
attgctccacctattggtcaacctccacagccagtgcatagtaattcaattggttttcca
ccttcagtatcacagccgatgaacttttcaaaaaatgttggaccaccaatgactggacaa
catatttcaggtaatattccatcaacaagtttgccacctcctatgggacatcagccaaca
ataccatatgggactggtcagaaaatgccttctaccatgggtcaacagataggtatgcca
cctaccatcaaccaaagacctgttcaaaatgtaggtatgccgcctttacctggtcaacaa
aggggcatagcacctatgacaggtcagccaatgggtattccaccttttactggccaacaa
acaggtatgcaacctttatctggtcaaacaatgggtatgtcgccaattccaaatcaacaa
atgggtatgccacctatggtaggccaacatatgcctatgccacagagtgttggtcagcca
catggaaatcgtcaaccctctggaatcaattccccaatgtctgcacctgttggcgcatct
cagcaaccaaaaaaaatagatcctaatcaaatgcctaaccctattcaagtaatgaaagat
gatcaagctgcctttaatgaagaagtatttttaactagtacacgtggtaaagttccgcca
ttagtgagcacaaaatgcaggattcaagatgatggtaactgcagtcctcgctatatgcga
tcatctatttattctatgccatgcaatcaagatatggtgaaaacaagtggtatacctata
gctattgtaacaacccctttagcaaaaatacctgatgatgagaatcaaattcgttatgtg
ctgcatggagctggaggtcctgtcagatgcaacagatgcaaggcttatatgaatccattt
atgcagtttattgatggtggaagaagatttatatgtaacatatgcaatcattcttctgaa
gttcctcaagactatttttgccatctggatcatcaaggtcgtcgtgtagatatgtttgaa
cgacctgaactgtgctttggttcatatgagtttattgctactgttgattactgcaagagt
ggtaaactacctagcccaccagcctttattttcatgatagatgtttcatatcaaagcatt
cagcaaggaatggtaaagattttatcagaagagcttcgcagtcgtttagaaaatcttcca
aaagatgttggaatggaagaaagtgttataaaagtgggatttatgacatacagtactcag
ttgcatttttataatgttaaaggtaaccttcctcaacctcaaatgatggtagtaactgat
gttgaagatgcatttgttcctcttcaagatggattccttgttaactacaatgaagcaaaa
gatgtaataaatagctttttagatatgcttccggaaatgtttcgagaagcaagagagaca
gaagtcattttaggtcctgttataaaatgtggtgttgaagccttaaaaagtgctggtata
tcagggaaattgtacatttttcattcatctttaccaattgctgaagctcctggaaaactt
aaaaaccgagaagacagaaaattattagctactgataaagaaaagacaattctaatgcct
caaggaaatttttatatgaatctagtcaaagattgtattgatgcaggtgttagtattgac
ctttttctttttcctaactcttatgttgatgttgctactattggtttaatggttacacaa
actggtggacaagtatacagatactcatttttcaaggaagttacacatggtaaacagttt
tcttctgatctcaaaaagaactttgagagaactgttgggtttgatgctgtaatgaggctt
cgttgcagcacaggattgcgaccagttgagttttttggcagctttgttatgaataataca
actgatgttgaactggcctctattgactctgagaaggctattgccattgaaataaaacat
gatgataaaattcctgaagatggcgttgcatacattcaaaacgcattgctttatacatca
gtttctggtcaaagacgtttgcgcatacataatatggcattttctacatgctcacagcta
ccagatctttacagatgttgtgaattggatactattgtgaactatctttcaaagtttgct
ttgaggcaggtgctaacatctactcctcaagctattaaagaaagtttagtgcaaaaatgc
gtgcaaatattagcatgttatcgtcaacattgtgccacaccatcaacatctggacagctg
attttgccagaatgcatgaagctactgccactatatgtcaattgtcttataaagagcgat
gtgctggcaggaggttctgaaatgagttctgatgatagagctttcttaatgcaagcatgt
ctttcaatgggacctgctagttcagcttcatatttttacccaagagtttttgctctgcat
tcacttgatcttgaccatgatgatgatattataccagagcaaattagatgtttaggagag
aaattccaagaaaatggtgtttatcttttagaaaatacaatttcaatgtttatatggatt
ggattgcaagtcaatccccaggtgcttcaagatatatttaatgtgaaatctattggtcaa
ctggatgttgatatgactcaattacctgagttggatacaccactttcaaaaagagttcgt
caaattgttgaggcaatacaatctgaacgacagaggtttttaaaactaactgtcgttcgt
caacgggacaaactagagccttggtttaaacattatattgtggaagataccggttttaac
acgagccatttaagctatgttgacttcttgtgtcatgttcataaagaaatccggaatatt
cttagctag
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