Hydra vulgaris (swiftwater hydra): 100205538
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Entry
100205538 CDS
T01080
Name
(RefSeq) ras-related protein Rab-39B
KO
K07925
Ras-related protein Rab-39B
Organism
hmg
Hydra vulgaris (swiftwater hydra)
Pathway
hmg04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
hmg00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
100205538
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hmg04131
]
100205538
09183 Protein families: signaling and cellular processes
04031 GTP-binding proteins [BR:
hmg04031
]
100205538
Membrane trafficking [BR:
hmg04131
]
Autophagy
Other autophagy associated proteins
Rab GTPases
100205538
GTP-binding proteins [BR:
hmg04031
]
Small (monomeric) G-proteins
Rab Family
Rab39/42 [OT]
100205538
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ras
Roc
Arf
MMR_HSR1
Gtr1_RagA
RsgA_GTPase
SRPRB
AAA_16
TniB
DUF5881
Motif
Other DBs
NCBI-GeneID:
100205538
NCBI-ProteinID:
XP_002167051
UniProt:
T2M8B3
LinkDB
All DBs
Position
3:16262309..16263346
Genome browser
AA seq
224 aa
AA seq
DB search
MTDNNYNPLETDLFYQFRVILIGDSTVGKSSLLRQFTEGQYIRTSDPTVGVDFHVRVIQI
SDKVRVKLQLWDTAGQERFRSITRSYYRNCAGCLIVYDINNRESFNHVSEWLREAKYATE
DLNVVYSLVGHKLDLDYLREVPTSEGEAFALANDMLFIETSAKILCNVEEAFSSVAREIY
KRFHQGSIRQNSDWEGVKKLPSLLPHIYLREESGDVEQRKKCCH
NT seq
675 nt
NT seq
+upstream
nt +downstream
nt
atgactgataataactacaatccattagaaacagacttattttatcaatttcgagttatt
cttataggagatagcactgttgggaaatcttctttgctacgccagtttaccgaaggtcaa
tatattcgtacatctgatcctactgttggtgtggattttcatgtgagagttattcaaatc
agcgataaagtaagagtaaagctgcagttatgggatactgcaggtcaagaacgatttcgt
tcaataacgaggtcatattatcgaaattgtgcaggatgtttaattgtttatgatataaac
aatcgtgaatcatttaatcacgttagtgaatggcttagagaagcaaaatatgcaactgaa
gatttaaatgttgtttattctttagtaggacataaactagatttagactatttgcgtgaa
gtgccaacttctgaaggtgaggcctttgctctagctaatgatatgctatttattgaaaca
tcagctaaaattctatgtaatgttgaagaagcatttagttcggtagctcgagaaatttat
aaacgttttcatcagggttctattagacaaaattcagactgggaaggtgtcaagaaatta
cccagtttattgccacatatttatttacgagaggaatcaggcgatgtagaacaaagaaaa
aaatgttgtcattaa
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