Hydra vulgaris (swiftwater hydra): 100205708
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Entry
100205708 CDS
T01080
Name
(RefSeq) TATA-binding protein-associated factor 172
KO
K15192
TATA-binding protein-associated factor [EC:5.6.2.-]
Organism
hmg
Hydra vulgaris (swiftwater hydra)
Brite
KEGG Orthology (KO) [BR:
hmg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hmg03021
]
100205708
Transcription machinery [BR:
hmg03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
100205708
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF3535
SNF2-rel_dom
Helicase_C
HEAT
HEAT_EF3_N
TOR1L1_N
HEAT_2
TPR_Trm732_C
HEAT_MROH2B_C
Vac14_Fab1_bd
HEAT_GCN1
ResIII
HEAT_GCN1_C_2
TPR_TNPO3_IPO13_3rd
TPR_IPO5
ARM_ECM29
HEAT_EZ
HEAT_GCN1_C
Motif
Other DBs
NCBI-GeneID:
100205708
NCBI-ProteinID:
XP_047143376
LinkDB
All DBs
Position
11:complement(25181803..25333809)
Genome browser
AA seq
1795 aa
AA seq
DB search
MSTRLDRLLLILDTGTTPVTRKAAAKQLGEVQKLHPHELSNLLARVYAYLKSKSWDTRVA
AAQAIEAIANSVPKWNPEGVKVKEEDDLFIHKASSKLLFEQFDISVVLEKGEKLLGSSGN
EFDDEESTTTGMSRSDAIAFQRHALKKKLGLDLVGGLDIGVENLLDDDELVSNVKSEPIS
VKSTESAVEIVASQIAAITSDGQMSSREKNRAKRLAKSIAKQRSRDLDLKNFDDSAPPAE
KKVRRTQSVVVDQPIEDKVLIDNVVDNSLEELDHWPFEEFCTELCSELFNPSWEIRHGAS
SGLREIIKVHGDGAGKTKNMSVEKMSIANTEWLEDTSLKLLCVFALDRFGDFISDEVVAP
VHETCAQTLGSTLHHMTCESVRKVLTILVQLQQNNEWQVRHGGLLGLKYMLAVRKDMAVE
LLPQIFPWILKGLQDKDDDVRAVAASALLPVSDLFQTHFPEKVPVLLQILWDILLELDDL
TASTNSVMSLLSSLVKVKEETNDFFSGHLTDFVPRLWPFLKHNISSVRLSSLSTLSILIS
NAKDKSWLQKILGDLLKQLYMRIILELNEIIRETVLEVWAVALDSNNYCCSLYSLTFLNF
SQWVELLVIPVHKPVDVLQVDKSKGNDECNQFSCIGSVNPCVDESEKESLVLKTRLCASK
ALGILLSHLSTEQNSSSLLFYIENLLLSGSATQQMCGSFVLHEWRRKNENAMLTNSLSLR
LNAILTEQIIYEELIFHHQRLQSDSQSLVYFFSEHGIDISCGIPIGSFNLDTATDIGTVQ
FQKEVVKLSPKFAKLANSKQRTLIITISNMKAEFMKLHTRVQASVAATLIAYNKLTDKLN
PVIRPIMDSIKQEDEVQLQKRMAIALSQLLTLCIDKTPCPNKKILKNLFTFACSDSSRTP
PILLDESFSYTADDGRQIICNSTVGILTLQQKQKLAEKELLSKRVRLSRSNSQQAKEHDF
QAEELKESIRQQQVQCEGASIALSTCVEEMGELLCEKLPDLWESTFTVLHECSSYYQYDD
IEKMKQTITAMQVFEIVALHLHSNLKQKLVEILPCFAYYLSHHYTSIRHVSARCFGVLSK
IIRMDTMNFILHDIIGILEQSDNPPGRQGVIEALFYVINNLGLDILPYIVLMVVPILARM
SDHMEDIRLIATNCFATLVQLMPLESSVPDTESMSEDLIKKKIIERRFLEQLLDGTKLDQ
YQIPIPINCELRKYQQDGVNWLAFLKKYNLHGILCDDMGLGKTLQSICIMAADHFDSLKK
YKMSLKEDLKPLPSLVICPPTLTEHWCYEVEKFCQKEHLNPINYTGTPSERQRLQANLKN
YNLVIASYDIIRNDAIFFIAQHWNYCILDEGHIIKNSKTMLSKKIKLLKANHRLILSGTP
IQNNVLELWSLFDFLMPGFLGTEKEFTAKFGKPILQSKDVKSSSKEQEAGALAMETLHKQ
TLPFLLRRLKEDVLQDLPPKIIQDYYCELSPLQVKLYEDFSQSQAKKTIDGAVDISSKSI
EVKQEAGHIFQALQYLRKVCNHPSLVMTPSHPEYSSVCSYLVENKSSLNDIQHSSKLLAL
KQLLLDCGIGVENNVNLTDELHPVVSQHRALIFFQLKSMLNIVENDLFKQHLPSITYLRL
DGSVPANQRHNIVQMFNNDPSIDVLLLTTHVGGLGLNLTGADTVIFVEHDWNPMKDLQAM
DRAHRIGQKKVVNVYRLIARSTLEEKIMGLQKFKLNIANTVITRDNSSLYSMDTSQLLDL
FTVSSKKGATDAKSLKSNEKKASMSDILAEMGDLWDEKQYENEYDLNQFMTSLKH
NT seq
5388 nt
NT seq
+upstream
nt +downstream
nt
atgagtaccagacttgaccgtctactcttgatattggacacaggaacaacacctgttacc
cgaaaagctgctgcaaaacaacttggtgaagttcagaagctacatcctcatgagctaagt
aatctcttagctcgggtctatgcatatcttaaaagtaagagttgggatactcgggttgct
gcagcccaagctattgaagcaattgcaaatagtgtaccaaaatggaatccagaaggagta
aaagtaaaagaagaggatgatcttttcattcataaagctagtagtaaattgttgtttgag
cagtttgatatatcagttgttttggaaaaaggagaaaaattattaggttcttcaggaaat
gagtttgatgatgaagagagcactactactggaatgtctcggtcagatgcgattgcattt
cagagacatgcacttaaaaaaaaacttggtttggatcttgtcggtggtttagacataggt
gttgaaaacttgttagatgatgatgaacttgtctccaatgtgaaatctgaaccaatttca
gttaaatctactgagagcgctgttgaaattgttgcttctcaaattgctgctattacatct
gatggtcaaatgagttctcgtgaaaaaaatagagctaaacgtttggcaaaaagtattgcc
aaacagagatctagagatttggatttaaaaaattttgatgattctgctccgcctgcagaa
aaaaaagtgaggcgcacacaaagtgttgttgttgatcagccaattgaagataaagtgttg
atcgataatgttgtagataacagccttgaagagctagatcattggccgtttgaagaattt
tgtactgaactatgcagtgaactttttaatccatcatgggaaattcgacatggtgcctct
tctggtctgagagaaattattaaagttcatggagatggagctggaaaaactaaaaacatg
tctgtagaaaagatgtctattgcaaatacagaatggcttgaagatacatctttgaagtta
ctttgtgtatttgcattagatagatttggagattttatttcagatgaggtagtagcacct
gtccacgagacttgtgctcaaacattaggttctactctgcatcatatgacatgtgaaagt
gtgagaaaggttctgactattttggttcaacttcagcaaaataacgaatggcaggttcga
cacggaggtttacttggtttaaaatatatgttagctgttagaaaggacatggctgttgaa
cttttacctcaaatatttccatggattttaaaaggacttcaagataaagatgatgatgtc
agagcagtagcagcatctgcattgcttcctgttagtgatttatttcaaactcactttccc
gaaaaggttccagtacttcttcaaattttatgggatatacttcttgaacttgatgattta
acagcatcaacaaatagtgttatgagtctactttcttcgcttgttaaagttaaagaggaa
acaaatgacttttttagtggtcatctaactgattttgttccaagattatggccattctta
aagcataatatttcctcagttcgtttgtcatctttatccacattgagtattctaatatca
aatgcaaaggataaaagttggttacaaaaaatactaggcgacttattgaagcaactttat
atgagaattattcttgaactaaatgaaattatacgtgaaactgttttggaggtttgggca
gtagcactcgacagtaacaactattgttgttcactttatagtttaacttttttgaatttt
tcacaatgggttgagctgcttgttattcctgtacacaaacctgttgatgtattgcaagtt
gataagagcaaaggaaatgatgaatgtaaccaatttagctgtattgggtctgtaaaccct
tgtgtagatgaatcggaaaaagaatcattggttctcaaaactagactgtgtgcatctaaa
gctttaggtattttgctctcccatctaagtactgaacagaattcttcttctttactgttt
tatattgagaatcttctattatctggatcagctactcaacaaatgtgtggttcttttgtc
ttacatgaatggcgaagaaaaaatgagaatgcaatgctaacaaattcactaagtttgcgg
cttaatgcaattcttacagaacaaataatatatgaagaacttatatttcaccaccagcgt
ttacaatctgattcgcaatcacttgtatactttttcagtgaacatggtatagacatatct
tgcggaataccaataggatcatttaaccttgatactgcaactgatattggaacagttcag
tttcaaaaagaagttgtaaaactttctcctaagtttgcaaagttagcaaattccaaacaa
cgaacattaatcataactatatcaaatatgaaagctgagtttatgaaacttcatacaaga
gttcaggcaagtgttgctgcaactttgattgcatacaataaactaactgataaattaaat
cctgttatacgaccaattatggattcaataaaacaggaggatgaagtccaattacagaaa
agaatggccattgctctttctcaacttttaactttatgcattgataaaaccccatgccca
aataaaaaaattcttaaaaatctgtttacatttgcatgcagtgattcaagtcgaacacct
cctattttactagatgaaagctttagttatactgctgatgatggtcgtcaaataatttgt
aactcgactgttggtattctcactttgcaacaaaaacaaaagttagctgaaaaagaactt
ctgagcaaacgggttcgtctttcaagaagtaattcacaacaagctaaagagcatgatttt
caagctgaggagctaaaagagagtatacgacagcagcaagtgcaatgtgaaggagcatct
atagctctatcaacatgtgttgaagaaatgggtgaattgctttgcgaaaaactgcctgat
ctttgggaaagcactttcaccgtattacacgaatgttcttcttattatcaatatgatgat
attgagaaaatgaaacaaactataactgcaatgcaagtgtttgaaattgttgcactacac
ctccattctaatttaaaacaaaaacttgttgaaattcttccatgttttgcatattacctc
agtcaccactatacctcaatacgacatgtatctgcaagatgttttggggtgcttagcaaa
ataataagaatggataccatgaactttattttgcatgacattataggaatcttagaacag
agtgataatccacccggaaggcaaggggtcattgaagctttgttttatgttattaataac
cttggtcttgacatattaccatatattgtgttgatggttgttccgatattagcacgtatg
agtgaccacatggaggatattcgactaattgcaacaaactgttttgccacattggttcaa
ttaatgcctctcgagtcgagtgtgccagacacagaaagcatgtcagaggatttaataaag
aaaaaaattattgaacggaggtttttagagcagctactcgatggtacaaagttagatcag
taccagataccgattcctattaattgtgagcttcgaaaatatcaacaggatggtgtcaat
tggttagcattcttgaaaaaatacaatttgcacggcattctttgtgatgatatgggtctg
ggcaaaactcttcaatccatttgtataatggcagctgatcattttgattcattaaaaaag
tataagatgtcattaaaagaagacttaaagcctcttccttctttagttatatgtccacca
acattaacagaacactggtgttatgaagtagaaaagttttgtcaaaaagaacatctaaat
ccaataaactacactggaacacctagtgagagacagaggttacaagctaatttaaagaat
tacaatttggtgatagcctcatatgacattataagaaatgatgctattttctttattgct
caacattggaattattgcatactagatgaaggacatataattaaaaacagtaaaacaatg
ttatcaaaaaagataaagttactaaaagccaatcatcgtcttatactaagtggaacacca
attcaaaataatgttctggaactatggtcactttttgattttcttatgcctggatttctt
ggaactgaaaaagaatttacagcaaaatttggaaagcctatattgcaaagtaaagatgtt
aaatcctcttctaaagaacaagaagcaggagctcttgctatggagacattgcataaacaa
acacttccttttttgctaagaagacttaaagaagacgttctgcaggatttaccaccaaaa
attattcaagattattattgtgaactcagtccacttcaggtgaagctatatgaagatttt
tcacagtctcaagcaaaaaaaactattgatggtgctgttgatatttcttctaagagtatc
gaagtaaaacaagaagctggacatatctttcaagcccttcaatatcttcgtaaggtttgt
aaccatccttcactggtaatgacaccttctcatcctgaatatagttctgtatgctcatat
ttagttgagaataaatcttcacttaatgacattcaacattcctcaaaacttttagcacta
aaacaacttcttctggattgtggaataggtgtggaaaacaatgtaaatcttacagatgag
ctccaccctgtagtttcacagcacagggcattaatattttttcagttaaaatcaatgctt
aacattgttgaaaatgatttgtttaaacaacatttaccatctataacctatttacgatta
gatggcagtgtccctgcaaatcaacggcataacatagtgcaaatgtttaacaatgatcca
agtatagatgtgttgctactaaccactcatgttggaggtttgggattaaatttaactggt
gctgatacagttatatttgttgagcatgattggaatccaatgaaagatttacaagcaatg
gatcgtgctcatcgtattggtcaaaaaaaagttgttaatgtttatcgcttgattgctaga
agtaccttagaagaaaagattatgggacttcaaaaattcaagctcaacatagctaataca
gttataactcgtgataattctagcctgtattcgatggatacttcacaactgctcgatcta
tttactgtcagttcaaaaaaaggtgctacggatgcaaagtctttaaaatcaaacgagaag
aaagcttcaatgagcgatattttagctgaaatgggagatctatgggacgaaaaacaatac
gaaaacgaatatgatctgaatcaatttatgacatcattaaaacattga
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