Hydra vulgaris (swiftwater hydra): 100205713
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Entry
100205713 CDS
T01080
Name
(RefSeq) DNA excision repair protein ERCC-8 isoform X2
KO
K10570
DNA excision repair protein ERCC-8
Organism
hmg
Hydra vulgaris (swiftwater hydra)
Pathway
hmg03420
Nucleotide excision repair
hmg04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
hmg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
100205713
09124 Replication and repair
03420 Nucleotide excision repair
100205713
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
hmg04121
]
100205713
03400 DNA repair and recombination proteins [BR:
hmg03400
]
100205713
Ubiquitin system [BR:
hmg04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
100205713
DNA repair and recombination proteins [BR:
hmg03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
Cul4-CSA complex
100205713
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WD40_WDHD1_1st
WD40
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_RIG_2nd
Beta-prop_EIPR1
WDR55
EIF3I
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_WDR75_1st
Beta-prop_EML
Beta-prop_WDR90_POC16_2nd
ANAPC4_WD40
WDR90_beta-prop_4th
Beta-prop_WDR19_1st
WD40_RFWD3
Beta-prop_IFT122_1st
Beta-prop_DCAF4
YABBY_N
Motif
Other DBs
NCBI-GeneID:
100205713
NCBI-ProteinID:
XP_012559341
UniProt:
A0A8B7DNF3
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All DBs
Position
8:complement(32406925..32442116)
Genome browser
AA seq
365 aa
AA seq
DB search
MIQRRIVSQDEMLLQQQLNGKKMHRQFCSLLFQYADVSFNDFELSPNSRVNWIDLENIES
RFLLSSYGDGSIMIFDLFKPFDSHIYKNLAKIDRTVFGSHKMSVDCVQWYPQDTGMFVSC
GADQTVRIWDTNEVQVAYKFEFQHKTYNFDISPSHALISVTSKDSNLYLCDLKSGSKTHT
LKGHQSSSLLTKWSPRNQNVLVSTSVLGEVYLWDIRKANSLLMKFSNGIKDAHNGAVNGL
CFAQGGLYLITLSTDKTVGLWDFSNGTLAKTRYENVANDLCQPVRLSVTNCLQKDVVFVP
SQETIKIFEIQSGKCTKTLSAHLMKTTSCDFNDNSMILYSGSADTKILEWSYQKTTQTTQ
THWEE
NT seq
1098 nt
NT seq
+upstream
nt +downstream
nt
atgatccaaagacgaatagtttcacaagatgaaatgttgttacagcaacaactgaatgga
aaaaaaatgcaccgtcaattttgttcattactttttcaatatgctgatgtcagctttaat
gattttgaattgtctcccaatagcagagttaactggattgatcttgagaacattgagagt
agattcttactttcgtcatatggtgatggaagtatcatgatatttgatctctttaaaccc
ttcgatagccatatttacaaaaatcttgctaagattgatagaacagtttttggtagtcac
aaaatgtctgtagattgtgtacaatggtatcctcaagacacaggaatgtttgttagttgt
ggagcagatcaaacagttcgaatttgggacaccaatgaagtacaggtagcttacaaattc
gaatttcaacataaaacatataactttgacatttcaccaagtcatgctttaatatctgtg
acatctaaggattccaatctttatttatgtgatttaaaaagtggatcaaaaactcacaca
ttaaaaggccatcaaagtagttctttgttaactaaatggtcacctcgaaatcaaaatgtt
ttagtatcaacaagtgttttaggggaagtatatttgtgggatattcgaaaagctaattcc
ttgcttatgaaattttcaaatggcattaaagatgcacataatggagctgtgaatggtctg
tgctttgcacaaggtggtctttatcttataactctttcgacagataaaactgttggttta
tgggatttttcaaatggaacattagctaaaacaagatatgaaaatgttgctaatgattta
tgccaaccagtacgactttctgtaaccaactgtttacaaaaagatgttgtctttgttcct
tctcaagaaactattaagatttttgaaatacagagtggaaaatgtacaaaaactttgtct
gctcatttgatgaaaacaacttcttgtgatttcaacgacaattcaatgatactctatagt
gggtctgcagatactaaaattttggaatggtcataccagaaaaccacgcaaactacgcaa
acccactgggaagaataa
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