Hydra vulgaris (swiftwater hydra): 100205824
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Entry
100205824 CDS
T01080
Name
(RefSeq) unconventional myosin-Va
KO
K10357
myosin V
Organism
hmg
Hydra vulgaris (swiftwater hydra)
Pathway
hmg04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
hmg00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
100205824
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hmg03019
]
100205824
04131 Membrane trafficking [BR:
hmg04131
]
100205824
03029 Mitochondrial biogenesis [BR:
hmg03029
]
100205824
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
hmg04812
]
100205824
Messenger RNA biogenesis [BR:
hmg03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
100205824
mRNA cycle factors
P-body specific factors
100205824
Membrane trafficking [BR:
hmg04131
]
Others
Actin-binding proteins
Myosins
100205824
Mitochondrial biogenesis [BR:
hmg03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
100205824
Cytoskeleton proteins [BR:
hmg04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
100205824
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myosin_head
DIL
IQ
Myosin_N
AAA_22
DUF5611
AAA_16
DUF4041
Motif
Other DBs
NCBI-GeneID:
100205824
NCBI-ProteinID:
XP_047130704
LinkDB
All DBs
Position
4:complement(33125026..33210778)
Genome browser
AA seq
1723 aa
AA seq
DB search
MSDHSLYVKGTRIWIPDIDEVWIGGFLQNDICNGKLEIELEDGREFVLDLNESKCDLPPL
RNPEILVGVNDLTTLSYLHEPAVLYNLKERFVNSQAIYTYCGIVLVAINPYQSVPIYGSD
IIAAYNGRQIGEMDPHIFAVAEDAFKNMVNLGKNQSIIVSGESGAGKTVSAKYTMRYFAN
VGGSQNETTIEQKVLASNPIMEAIGNAKTIRNDNSSRFGKYIEINFNDNYNIVGANMRTY
LLEKSRVVYQAPNERNYHIFYQLCSHRNLPCFQELNLKSVDDFFYTQQGKSPSIKDVDDL
KCFQETCEALELLGIYSEQQRMLWRILAAILHLGNVDIVAVSKSKDECSIKVDDSHVRMV
SSLLGIDCGQLCKWLCARKIIATGEVYVKPLTWHEANNGRDALAKHIYAQLFDWIVEHVN
SNLAMASERKSFIGVLDIYGFETFQVNSFEQFCINYANEKLQQQFNQHVFKLEQMEYVKE
QIQWSFIDFYDNQPCLDLIEEKLGILDLLDEECRMPKGSDASWASKLYKHHLKNGRYFEK
PRMSDVAFIIRHYADDVVYDCNGFVEKNRDTINEEHLSLLRASEYELVGELFGSKDFTDG
FIQRKRTTSRVGKTAPKGKKTVGSQFRDSLTKLMEALNSTSPHYIRCIKSNDRKAPFELD
SKRCVQQLRACGVLETIRISASGYPSRWSYQEFFYRYRILVPWKKIKWDNLIETCRIILD
NVIQNKDKFQCGKTKIFFRAGQVAYLEKLRNDVLRDNCIKIQKNVKGWLMYRKYHCLKKA
SIKIQAWFRGRLATRLVNHMRRTRAATNIQKRWRGYFARTSYTTIRNQFIIIQAHIRGLL
IRRKLKAYIQWKKSIIIQKNWRRYYARKEYLSTRKSIILLQCCIRRMAARKELKKLKIEA
RSVEHLKTVSKGMEIKIITLQEKLNAEKKEKEYLKQKVDSLMIIEQEAQDYKEIKSIKEQ
LEKSFKNIEKENNRLQIELNVAIETTVNLTKDKEMLIATSEKEVKELKLSIEDLMKTLEI
EKSKCEAQSLDHKLHLQQCLDEQRKQMEAEFSVERASHQKMLGDFARLEQRFMNLQEEQI
IEKSPEKRQKRSFADSDKNLLTGVNDEKLNNLVDELSEVLRERDMLLEQVELLKDEQKVN
LNISKDSEYNATNKQLLNENNLLKNENEQMKQQLIVMTNAVENDDKLAKDGMVPNLLKQI
KELREENTVLRKKLDKFLANQMVGNVTNNNNMSDLAEKEISRLTVENLHLHEEIEKFEAQ
LKALSSQNSRNTLTNKGELQHGIVPRSKSNVSDLRRHRSTTTIENRIADGSLSEAAKLCV
TYAGLTRKKTGTLVQSSTPPQPVRAVQGMLNVKGEYQEKVINKLITELHPSQVDKEVPGF
PAHLLFMGIRYIDHNSEERLMQSYLTAVISGIKKKVLKHSTDIEVQSFWLNNTFRLCCNM
KQYSGEPQFQNVNSREQNKHCLKNFDLSEYRQVLSDTCIKIYQDMVYNIQQRITNLIVPG
MLEYESIPGVVSTLRKFKSDKKIQEEIVTVKDITNKLTAILAVLNAHCVHPTLIKQIFTQ
IYYFINATMINNVLLRKDMCHWSRGLQIRFNVTQLEEWCRTNQLHESDLLKQLEPITEVV
QILQVNKKSVEDADGIIAIVKSLNALQVQKILTMYTPPNEYEPRVPSSLIKAVMNKMKKE
DNACIMFDLKYINPMTVPFIPSTVVFDKLEIPESLELAPVTII
NT seq
5172 nt
NT seq
+upstream
nt +downstream
nt
atgagtgatcactctttatatgtgaagggaacaagaatatggattcctgatatcgatgaa
gtatggattggtggttttttgcagaatgatatatgtaatggaaaattagaaatagaactt
gaggatggaagggagtttgtattggatttgaatgaatctaaatgtgatttaccaccattg
cgtaatccagaaattcttgttggtgttaatgacttaactacactcagctacttacatgag
ccagcagttctatacaacttaaaggagagatttgtaaattctcaagctatttatacatat
tgtggaattgttttggttgctattaatccttatcaaagtgttccaatatatggttctgac
atcattgctgcttataatggccgtcaaattggggaaatggatccacacatatttgcagtt
gctgaagatgcttttaaaaatatggtcaatttaggcaaaaatcaatcaattattgtatcg
ggagaaagtggggctgggaaaactgtaagtgcaaagtacacaatgagatattttgccaat
gttggcggttctcaaaatgaaacaactattgagcagaaagttttggcatcaaatcctata
atggaggctattggaaatgccaagactatacgcaatgacaacagttctcgatttggtaaa
tatatagaaattaactttaatgacaactacaacatagttggagcaaatatgcgaacttat
ctgctagaaaagtctagggttgtttatcaagcaccaaacgaaagaaattaccacattttt
tatcaattatgttctcatagaaacctaccttgttttcaagagctgaatttgaagtcggtt
gatgatttcttttatactcagcaaggtaagagtccttccattaaagatgtagacgatcta
aagtgctttcaggaaacctgcgaagctttagaattgcttggcatatacagtgagcaacaa
agaatgttatggagaatccttgctgccattcttcatttgggtaatgttgatatagttgca
gtttcaaaaagtaaagatgagtgctctataaaggtagatgattctcatgtcaggatggtt
tctagtttattaggaattgattgtgggcaattgtgcaagtggctatgtgctcgtaaaatt
atagcaaccggagaagtttatgtcaaaccgttaacatggcatgaggcaaacaatgggcgt
gatgctttagcaaaacacatttatgcacaattatttgattggattgttgagcatgttaat
tctaacttagcaatggcatcagaaagaaagtcttttattggtgttcttgatatttatgga
tttgaaaccttccaagtaaacagctttgaacagttttgtattaattatgcaaatgaaaaa
ctacagcaacagtttaatcagcatgtctttaaacttgaacaaatggaatatgtgaaagaa
caaattcagtggtcatttatagatttctatgacaaccaaccatgtttagatttaattgaa
gaaaaattaggaattcttgatttgttagatgaagaatgtaggatgccaaaaggctcagat
gcaagttgggcttcgaaattgtataaacatcatttaaagaatgggcgttattttgaaaaa
cctagaatgtcagatgtagcatttataattcgtcattacgcagatgatgttgtatatgat
tgtaatgggtttgtagaaaagaaccgagacactattaatgaagaacatttatctttactt
cgggctagtgagtatgaattagtgggagaattgtttggctcaaaagattttactgatggt
tttatacagaggaaacgtacaacctccagagttggaaaaacagcaccaaaaggaaaaaaa
actgttggatcgcagtttcgtgattctctgacaaagctcatggaggccctaaactcaact
tcgccacactatataagatgtattaaatcaaatgatcgtaaggctccttttgaactagat
tcaaaaagatgtgtgcagcaacttcgagcttgtggtgtgcttgagacaataagaataagt
gcttctggttacccatctagatggtcctatcaagaatttttttatcggtatcgaatattg
gttccatggaaaaaaataaaatgggataatttaatagaaacatgtagaattattttagat
aatgttatacagaataaagataagtttcaatgtggtaaaacaaagatattctttagagct
ggacaggtcgcttatctagaaaaattaagaaatgatgttcttagagacaattgtataaag
attcaaaaaaatgtaaaaggatggttaatgtatcgcaaatatcactgcttgaaaaaagct
tctattaaaatacaggcttggtttaggggtcgattggctacaagattagtgaatcacatg
cgaagaacaagagctgctacaaatattcagaaaaggtggcgtggatactttgctcgaaca
agttacaccacaataagaaatcagtttatcattattcaagcgcatattcgtggtttatta
attcgcagaaaattaaaagcttatattcaatggaaaaaaagtattataattcaaaaaaac
tggaggagatattatgcacgaaaggaatatctttcaacaaggaaaagcattatcctgcta
cagtgttgtataaggcgtatggctgctcgcaaagaacttaaaaagcttaagattgaagca
cgttctgttgaacatttaaaaacagtaagcaagggcatggagattaagattattacattg
caagaaaagctaaatgctgagaaaaaagaaaaagaatatttaaaacaaaaggttgacagt
ctgatgattattgaacaagaagcacaagactacaaagaaattaaatcaatcaaagaacag
ctggaaaaatcttttaaaaatatagaaaaagaaaacaacaggctacaaatagaactcaat
gttgctatagaaacaacagttaatttaacaaaagacaaagaaatgcttatagcgacaagt
gaaaaggaagttaaagaactaaaattatctattgaagatttgatgaaaacattagaaata
gaaaaatcaaagtgtgaagcacaatctttagaccataagttgcatcttcagcaatgtctt
gatgagcaacgcaagcaaatggaagcagaattttcagttgaacgagcaagtcatcaaaag
atgttaggtgactttgctcgtcttgagcagcgattcatgaatcttcaagaagaacaaatt
attgaaaaaagtcctgaaaaaagacagaaaagatcttttgcagattctgataaaaacttg
cttactggcgttaatgatgaaaaactaaataatcttgttgatgagttatctgaagttcta
agagaaagagacatgttgctagaacaagttgaactactaaaagatgagcaaaaagtcaat
ttaaatatctcaaaagattcagaatataatgctacaaataaacaacttttgaatgaaaat
aatctgttaaaaaatgaaaatgaacagatgaaacagcagttgatagtaatgacaaatgct
gttgaaaatgatgacaagttggcaaaagatggcatggtacccaatctattaaagcaaatc
aaagagctaagagaagaaaatacagttttaagaaaaaagcttgacaaatttcttgcaaat
caaatggttgggaatgttaccaataacaacaatatgtcagacttggcagaaaaagagata
tcacgtctcactgttgaaaatcttcatttacatgaagaaattgaaaagtttgaggctcaa
ttaaaagctctttcttctcaaaattcaaggaacaccttaacaaacaaaggggaacttcaa
catggcattgtaccaagaagtaaatctaatgtatcagatctcaggaggcatagatctaca
acaacaatagaaaacagaattgctgatggaagtctttctgaagctgcaaagctgtgtgta
acatatgctggattgactagaaaaaaaactggtactttagtacaatctagtacaccccca
caacctgtaagagctgttcaaggaatgttaaatgtcaaaggtgaataccaggagaaagta
atcaataaacttataactgaacttcatccttctcaagttgataaggaagttccaggtttt
ccagctcacctcttgtttatgggtatacgatatattgaccataatagcgaagaacgtctt
atgcagagttatttaactgctgttatctctggaattaaaaagaaagttttgaaacattct
acagacattgaagtgcaatcattttggctgaacaataccttccgcctatgctgtaatatg
aaacagtatagtggagaaccacaatttcaaaatgtgaattcacgagagcaaaataaacac
tgtttgaaaaactttgatttatctgaatacagacaagttctgagcgatacttgtataaaa
atttatcaagacatggtctataatattcagcaaagaattacgaatcttatcgtccctgga
atgttagagtacgaatcaattcccggagttgtttcaactttgcgaaagtttaaatctgac
aaaaaaattcaagaagaaattgttactgttaaagacatcacaaacaaattaactgctata
cttgccgttttaaatgcacactgtgtgcatccaactttaattaagcaaatatttactcag
atttactactttataaacgctacaatgattaacaatgtgcttttgcgaaaagatatgtgt
cattggtcaagaggactgcaaattaggtttaatgtgacgcaattagaagaatggtgtcga
actaatcagctgcatgagagtgatcttcttaaacaattagaaccaatcacagaagttgta
caaattttgcaagtcaacaaaaagtcagttgaagatgctgatggaataattgctattgtt
aaatcacttaatgcacttcaggtgcaaaaaatactcacgatgtacactccgccaaatgaa
tacgaacctcgtgtaccatccagcctgatcaaagccgtcatgaataaaatgaaaaaagaa
gacaacgcttgtattatgtttgatcttaagtacataaatccaatgacagtgccatttata
ccatcaaccgtagtatttgataaattagaaatacctgaatctttggaattggcaccagtt
actattatataa
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integrated database retrieval system
