Hydra vulgaris (swiftwater hydra): 100205840
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Entry
100205840 CDS
T01080
Name
(RefSeq) transcription factor Sox-21
KO
K16796
transcription factor SOX2 (SOX group B)
Organism
hmg
Hydra vulgaris (swiftwater hydra)
Brite
KEGG Orthology (KO) [BR:
hmg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hmg03000
]
100205840
Transcription factors [BR:
hmg03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
100205840
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
HMG_WDHD1
DUF3465
Motif
Other DBs
NCBI-GeneID:
100205840
NCBI-ProteinID:
XP_002161378
UniProt:
T2MFM3
LinkDB
All DBs
Position
4:7093312..7095647
Genome browser
AA seq
387 aa
AA seq
DB search
MATAINVIQHPSDANNDTHFKQVVGYNTSQSMLVPQNLNLSNRVSNSLVSDHETSKQEDF
DKVKRPMNSFMVWSREKRRRLAHENPKMHNSEISKRLGAEWKVLTEDEKAPFVFEAKRLR
AEHMKSHPDYKYRPRRKAKTSSKKNEQKMPHVITTDGKQIFMPTQYTSGYAITGGINYPF
NGYLSALVNGHEAYASNTSPSAVYGFPHGATIAVTSTISQSQLPSSSSSSVTAATGLSAQ
YSVVHSGTPTYMYSPLGFPYLNGAAMGTYGGQPYSHALTLKPDTSSITVSTEKATSHLSM
HHDAVRSTIAPSVYYPIGIYPTAVDHNCNLTYDPKIPYATMTLLEQPHGNVKREQTREGT
TRNISDDHQSRRVNTPTYSISSNTATQ
NT seq
1164 nt
NT seq
+upstream
nt +downstream
nt
atggccactgcaattaatgttattcaacatccctctgacgccaataatgatactcatttt
aagcaagttgtaggttacaacacttcgcaatccatgcttgttccacaaaatttaaaccta
tcaaatcgtgtatctaattctcttgtttccgaccatgaaacttctaaacaagaagatttt
gataaggtcaaaagaccgatgaattctttcatggtgtggtctcgagagaagcgacgaaga
ctcgcacatgaaaatcctaaaatgcataacagtgaaataagtaaacgcttgggagccgag
tggaaagttttaactgaagatgaaaaagctccttttgtttttgaagcaaagcgtttaaga
gctgaacatatgaaatcacatcctgattacaagtatagaccacgtcgtaaagctaagact
tcatcaaaaaaaaacgaacagaagatgcctcatgtaataacaactgatgggaaacaaatt
ttcatgcccacacagtacacttctggatatgcaataacaggaggtattaattaccccttt
aatggttatttatctgcactagtaaatggacatgaagcatatgcgagtaatacatcacca
tcagctgtctatggctttccacatggagcaaccattgcagtgaccagtactatatcacaa
tcacaattgccttcttcatcaagttcctcagtaacagctgctactggtttatctgcgcaa
tacagtgttgtacattcaggtactccaacttacatgtatagtccgttaggatttccatat
cttaatggtgctgctatgggtacatatggtgggcagccttattcacatgctttaacactt
aaaccagacacatcgtctatcactgtatcaactgaaaaagcaactagtcatttatcaatg
catcatgatgctgttcgttcaacaattgcaccaagtgtttattacccgattggtatttat
ccgactgctgttgatcacaattgtaacctaacatatgatccaaaaataccatatgcaaca
atgactttattagaacaacctcatggaaatgtgaaacgtgaacaaactcgtgagggtaca
acacggaatatttcagatgatcaccaaagtagaagagttaatacacctacatattctatt
tcgtccaacactgcaacgcagtag
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