Hydra vulgaris (swiftwater hydra): 100205922
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Entry
100205922 CDS
T01080
Name
(RefSeq) spectrin alpha chain, non-erythrocytic 1-like
KO
K06114
spectrin alpha, non-erythrocytic (fodrin)
Organism
hmg
Hydra vulgaris (swiftwater hydra)
Pathway
hmg04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
hmg00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
100205922
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
hmg04812
]
100205922
Cytoskeleton proteins [BR:
hmg04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
100205922
Intermediate filaments
Intermediate filament-binding proteins
100205922
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spectrin
EFhand_Ca_insen
SH3_1
EF-hand_1
EF-hand_7
EF-hand_6
SH3_2
SH3_9
EF-hand_8
SH3_10
SCO1-SenC
SH3_3
Motif
Other DBs
NCBI-GeneID:
100205922
NCBI-ProteinID:
XP_047134743
LinkDB
All DBs
Position
6:31537630..31631117
Genome browser
AA seq
2421 aa
AA seq
DB search
MTTEIVGNGTEFPEQGPKREIKLLETVEDIQKRREQVLRRYGDFKQATKERRKRLEDAKL
LCQFKRDSDEVEVWIEEKMKIASDQSFKEPINLQVKLQKHTTFEAEVKAHLFMIETIESK
GMIMVNENHYASDYVIKRIDELKLLWSLLLQQSQEKSYMLLCTQSRVNILLQIDELLYWI
IGKESIVAEEEPIRDLEHVQSLQKNFDAFHKDLLGNEVRITEVNEICKKLCEEKHPDTQE
IIAKCEKLNSSWYTLMEHVQEKNKKLMVLFELYHFYRDVDESLVWMSEKNDILSNPDIGD
DLQSVTALQRKHETLERDLAALSVKVSILNNEASDLKKKYGDAEKTIIEKENELSLYWKN
LQEKAFVRKKNLADSFCLHKFLSESRDYQSFVNDMVSMIKTDKKGSDVESAKALQEMHDE
HKGYIDASEDGFEKTIALGKKIIEDEHCGKPDVENEIAILQKERQKVIECWVEKKKEYDQ
GLDFQLFMRDADQMESIMVKQENFLCSEPDSDSVDGADKLKKKQEEFENALQTQEEKIEA
IIEFADRLASQNHSAIQEIKAKQEHIINRRNRLWELASLRRSKLGDSSQFYQFEREAEET
KIWLQEKLKVAQDECFRDPINLQGKIQKQHAFLLELNANKSRIDSVKERGHELIDSAHYA
KNEILTLINEVEMGWEEVNLKAEEKTQRLSEANLEQQFVRSIEDFEMWLGETEMHLESDD
LGKNLASVKNLQKKLNLLEADVLSHKEPLQVIKEAASQFIANNHFNSEAILIKQASVADR
YSRIDIPLHKRKTDLENSRKYHQLLHDIEDEESWIKEKEPIVSSLHTGKDLIGAQNLLKK
HQALVAEISLHEKDIAEVCLTGNNLVKEGHYACEDIKTNIEYLSNLWNDLKNRSDLRMRE
LLDAIETHQYIADADDAESWIIEKEPLASNSEYGKDEDTAQAMLKKHKALMADIEAFSAI
INVLNEQSQKCKPFIFGDLSNKEVVEVIQNYDEKNPHEISIEKGQILTLLNSSNREWWKV
ESDDRQGFVPKECLQKVDSFKASQDILSNITETESIASRQEKLNKRYNDLITNAQQRNIM
LQESIKKNAMLRKVKQIQSWIQDSEAVIMCSEVGVDMDDVEALQKKYDEFEKNMVSQEQR
ITELRLLCSQLKEENASEYEKVNAVLENVSQQWGKMLENASHRKKVLESSSEIHKFHRDA
DDAKAWIDEKSISLSSIDYGKDLASVQSLQRKHEVLERDLAALEEKVNSLNAEAGKLMDN
HLTSADLIKEKLNDLTENWSELTRKANERKAKLNESYAFQKFLNDYRDQLSWIQSINSLV
SSDDLASDVVEAEAMLDRHQEHKFEMDSHELTFDNFNAFGERLIEEKHCNSLEIAEKIQE
IKTSREHLEILWNKRKKTLDENMDEMLFNRDAELAESWMAARETSLKNEDNESTDVLMKK
QKDFEKAIAIQEGKIQVLQQTAEDLINAKHYNNEIISSRIVAVMARWETLKEALVDRRSK
LGESQSLQSVSKDLDDIESWISEKLQSALDESYMDPSNIQGKLQKHQALEAEVSSNKDRV
LSTVSIGNGLIKQNKCKGSEEHIKERLDNIESTWRTLCECCKIKTKKLLEASEQQAFSHD
AQDLDFWLGEIEKVLSSPNCGSNLSDVQNLLKKHQFTEADIFAHEERIVMLQVLCKHFVE
VKHFDASKILETTDNIVMRFNNLKILASNRKNMLESSFALYQYYRDIDDQESWIRVKKVL
ASSQDYGQDVTSCQNLQKKAQRLIAEIKTFEPQFEQILSKIDYFKEKEPTCTEKINARCE
QLKNNWNELTQLANNRNKLLVEAQEYQQIVSDIHVEFSWIAEKQKLVLSEDYGDTLAAIQ
GLLKKQEAFCNDLCVHKVRFENIQKQGKKLIEENNFKKVTIKEKIDELSVKFAALDKDAG
LRQHKLNDNNSFLQFKWKADVAESWIEEKEKYLKVDHFAKDLFSAQNLITRQDAFEAGLS
AFELDGIARITVLKEELVSSQHEQSAAIVEAYKNLLARWHDLLNYTAKLRQSLIEQQKYH
QMIEDLFLIFAKKASAFNSWFENAEEDLTDPVRCNSVEQIKELLDSHSTFRNCLSQPKAD
FAQLIDLDSQIKAYNINYNPYTWFDMEALEETWKKLQETVKDREVELEKEARRQDFNDEL
RQSYASKANLFHKFLEETKELMVDLSGSLEDQLKTLKNTSNIIQAKRDDLDNIEILGAQL
EEAMILDNKYTEHSTVGLAQQFDQLNQLNMRMQQNLDHQIQAKNRTGVSEEKLKEFTSMF
KHFDKDRTGFLEHQEFKSCLRSLGYNLPLVEEGADDPEFKSILFTVDPNNDGVVSLNEYI
AFMISRETENVKSAKEVDEAFRAITDGGKQIYVTEQELYQALTREQAEFCMSRMKTYVDK
NGRELPGYFDYGLFCEELFVA
NT seq
7266 nt
NT seq
+upstream
nt +downstream
nt
atgactactgaaattgttggaaatgggactgagtttcctgaacaaggtccaaaacgtgaa
ataaaacttcttgaaactgttgaagatattcaaaaacgtcgagaacaggttcttcgaaga
tatggtgactttaaacaagctacaaaagaacgtagaaaacgattagaagatgcaaaactt
ctttgtcaatttaaaagagatagcgacgaagtagaagtttggattgaagagaaaatgaaa
attgcttcagatcaaagttttaaagagccaataaatttacaggttaaattacaaaagcat
acaacatttgaagctgaagtaaaagcacatttgtttatgatagagacgatagaaagcaaa
ggaatgattatggttaatgaaaatcactatgcatccgattatgttattaagcgtattgat
gagttaaagttactttggtcattactgcttcaacaatctcaagagaaatcttatatgctt
ctttgcacacagtcaagggttaacattttgcttcaaatcgatgagttgttgtactggatt
attggaaaagaatctattgttgcagaagaagaacctattagggatttagagcatgtccaa
tcgttacaaaagaactttgatgcttttcataaagatttgttgggtaatgaagtacgcatt
acagaagtaaatgaaatttgcaagaagctttgtgaagagaaacatcctgatacacaagaa
ataatagcaaaatgtgaaaaattaaattcatcatggtatactttgatggaacatgttcaa
gaaaaaaataagaaattgatggtgctttttgagttgtatcatttctacagagatgttgat
gagagtcttgtatggatgagcgaaaaaaatgatattttgtccaacccagatataggagat
gatttacaaagtgtcactgcattacaaagaaaacatgaaacattagaacgagaccttgct
gctttgtctgtcaaagtatcaattttaaataatgaagccagtgatttaaagaaaaagtat
ggtgatgctgaaaaaactatcattgaaaaagaaaatgagctgagtttgtactggaaaaat
ttgcaggaaaaggcttttgttcgaaaaaaaaacttagctgattctttctgcttgcataaa
tttctttctgaatcacgtgattatcagtcatttgtgaatgatatggtttcgatgattaaa
acggataaaaaaggaagcgatgttgaaagtgctaaagcattgcaagaaatgcatgatgag
cacaagggttatatcgatgcttcagaagatgggttcgaaaaaacaattgctcttggaaaa
aaaattatagaagatgagcattgtggaaagcctgatgttgaaaatgagattgcaatttta
caaaaagagcgtcaaaaagtcattgagtgttgggtagagaaaaaaaaagaatacgaccaa
ggactagattttcaactgtttatgagagatgctgatcaaatggaatctataatggttaaa
caagaaaatttcttatgctcagaacctgatagcgattcagttgatggtgcagacaagttg
aaaaagaaacaggaagagtttgagaatgcattacagactcaagaggaaaaaattgaggct
attattgagtttgcagatcgcttagcttctcaaaatcattctgctattcaagaaattaaa
gcaaaacaagaacatattataaacagacgcaacagattatgggaacttgcaagtttacgt
agatcaaaactaggtgattcatcacagttttaccagtttgaacgagaagcagaggagact
aagatatggttacaagaaaaactgaaagtagcacaggatgaatgttttcgtgatccaatt
aacttacaaggcaagattcaaaaacaacatgcatttttgttagaactcaatgcaaataaa
tctagaattgatagcgtgaaagaaagaggccatgaactgattgatagtgctcactatgcc
aaaaatgaaattttaacattaatcaatgaagttgaaatgggatgggaagaagttaaccta
aaagctgaagaaaaaacacagcgactttctgaagcaaatttggaacaacaatttgtaaga
agtattgaagattttgaaatgtggctaggtgaaacagaaatgcatttggagtctgatgac
cttggaaaaaacttagcaagtgtaaagaatctacagaagaaattaaatttgttagaggca
gatgttctttctcacaaggagccacttcaagttataaaagaggcagcatctcaattcata
gctaacaatcactttaattctgaagcaatactaataaaacaagcttcagtagctgatcgt
tatagccgtattgacattcctcttcataagcgtaagacagatttagaaaattctagaaaa
tatcatcagctcctacatgatatagaagatgaagaaagttggattaaagaaaaggaacca
attgtttcttcattgcacaccggaaaagatttgataggtgctcaaaatctcttgaaaaaa
catcaagctttagtggccgaaatatctcttcatgaaaaagatattgcagaagtttgctta
acagggaataatttagttaaagaaggtcactatgcttgtgaggatatcaaaacaaacatt
gaatacttaagtaacttgtggaatgatttgaagaatcgaagtgatctacgtatgagagag
ttgttggatgccattgaaactcatcaatacattgctgatgctgatgatgctgaatcttgg
attatagagaaagagccactcgctagtaactctgaatatgggaaagatgaagacacagct
caggcgatgcttaaaaaacataaagctcttatggcagatattgaagctttcagtgcaatt
attaatgtcttgaatgaacaaagtcagaaatgcaagccatttatatttggtgacctgtct
aataaagaagttgttgaagttatacaaaactacgatgaaaaaaatccacatgaaatttct
atagaaaaaggacagattttaacattattgaacagctctaatagagaatggtggaaagtt
gaaagtgatgaccgccaagggtttgttccaaaagaatgtttgcaaaaagttgactcattc
aaagcatctcaagacattttgtcaaatattaccgagactgaaagtattgcaagtcgtcaa
gaaaagttaaataaaaggtacaatgatttaattactaatgctcaacaaagaaatattatg
ttgcaagagtctataaaaaagaatgcaatgttgcgcaaagttaagcagattcaatcctgg
attcaggattcggaagctgttatcatgtgctcggaagttggagttgacatggatgatgtt
gaagctcttcagaagaagtatgatgagtttgaaaagaatatggtttctcaagaacaaaga
attacagagttgcgattgttgtgctctcaacttaaagaagaaaatgcaagtgaatatgaa
aaagtaaatgcagttcttgagaatgtttctcagcaatggggcaaaatgttagagaatgct
tcacaccggaaaaaagttttagagagttctagtgaaattcacaagttccatcgtgatgct
gatgatgccaaggcttggatagatgaaaaaagtatttcattatcatcaatagactatggt
aaagatcttgcaagtgttcagtcattgcaaagaaaacatgaggtcttagaaagagactta
gctgcattggaagaaaaggttaattcacttaatgcagaagctggaaagctcatggacaac
catttaacatctgctgatttaataaaagaaaagcttaatgacttaactgaaaattggtca
gagctaacgagaaaagctaatgaaagaaaagcaaagttgaatgaatcgtatgctttccag
aaatttcttaatgattatcgagatcagctatcttggattcaaagtattaattcattagtt
tcatctgatgacctagcatcagatgttgtggaagctgaagctatgctagatagacatcag
gaacataagtttgaaatggattctcatgagcttacatttgacaactttaatgcatttggt
gaaaggttgatagaggaaaaacattgtaattcccttgaaatagctgagaaaattcaggag
ataaaaacaagcagagaacatctagagatattgtggaacaaacgtaaaaaaaccttagat
gaaaatatggatgagatgctttttaatagagatgcagaacttgcagaatcttggatggca
gcaagagaaacttcattgaaaaatgaagacaatgagtcaactgatgtgctaatgaagaaa
caaaaagattttgaaaaagccatagctattcaggagggtaaaattcaagtgttgcaacaa
acagcagaagacttgattaatgcaaaacattacaataatgaaattattagttcaagaatt
gtagctgtcatggccagatgggaaacattgaaagaagctttagtagatagaagatcaaaa
ctgggggaatctcaatccctgcaatcagtaagcaaagatttggatgatattgaatcttgg
ataagtgaaaagttacaatctgcgttagatgaatcatatatggacccatcaaatattcag
ggaaaattgcaaaagcatcaggcattagaagcagaggtatcatctaataaagacagagtt
ctcagtactgttagtattggaaatggtttaattaaacagaacaagtgtaaaggaagtgaa
gaacatattaaagaaaggttagataacatagagtcaacatggagaacactttgtgaatgc
tgtaaaataaaaaccaaaaaacttttggaagctagtgagcaacaagccttttcacatgat
gcacaagatcttgatttttggcttggagagattgagaaagttttgtcttcgcctaattgt
ggttctaatctttcggatgtccagaatcttttaaaaaaacatcagtttacagaagctgat
atttttgctcatgaagaacgcatagttatgctgcaagtactctgtaaacattttgtagaa
gtcaaacattttgatgcctctaaaatattagaaaccactgacaatattgttatgcggttc
aacaatttaaagatacttgcttccaaccgaaagaatatgttggaatccagttttgcatta
tatcaatactatagagatatagatgatcaggagtcttggattagagtgaaaaaagtactt
gcatcttcacaggattatggtcaagatgttacaagttgtcaaaatttacaaaagaaggcc
cagcgtttaattgcagaaataaaaacttttgaaccgcaatttgaacaaattctatcaaaa
attgattattttaaagagaaagaacctacctgtactgaaaaaattaatgctcgatgtgaa
cagcttaaaaacaattggaatgaattgactcaacttgctaataacaggaataaattgtta
gttgaagcacaagaataccagcaaattgtatctgacatccatgttgaattttcttggatt
gcagaaaaacaaaaattagtattgagtgaggattatggagacactttagctgccattcaa
ggtcttttaaagaaacaagaagctttttgtaatgatttatgtgttcataaagtgcgattt
gaaaacattcaaaagcaaggaaagaagctgattgaagagaacaatttcaaaaaagtcact
attaaagagaagatagatgagctctctgttaaatttgcagctttagacaaagatgctgga
ttgcgtcaacataaacttaatgataacaattcattcttacagtttaaatggaaagctgat
gtcgctgaatcatggattgaagaaaaagaaaaatatcttaaagttgatcactttgcaaaa
gatctatttagtgcacaaaatttaataacacgacaggatgcttttgaagctggtttatca
gcatttgaattggatggaattgcacgtataacagtattaaaagaagagcttgttagttcg
cagcatgaacaatcagctgcaattgttgaagcatataagaatttacttgcaagatggcac
gatctattgaattatactgctaaactgcgacaatcattgattgaacaacaaaagtaccat
caaatgattgaagatttgtttttgatctttgcaaaaaaagcatctgcatttaacagttgg
tttgaaaatgctgaagaagatttaactgatcctgttcgctgtaattctgttgaacaaatt
aaggaattattagattcacattctacttttcgaaactgcctcagtcaaccaaaagctgat
tttgcacaattaattgatttggattctcagataaaagcctataacattaactacaatcca
tacacatggtttgatatggaggctttagaagaaacttggaagaaactacaggagacagtg
aaagaccgagaagttgagctggaaaaagaagcacggcgtcaggattttaacgatgaactt
cggcaatcatatgcttcaaaagcaaatctctttcataaatttttagaagaaaccaaagaa
ttaatggttgacttatctggcagtttagaagatcaacttaaaactttaaaaaacacctca
aatattattcaggcaaagcgtgatgatttagataatattgagatcttaggagcacagttg
gaagaagcaatgattttagataataaatataccgaacacagtactgtaggtttagcacag
caatttgatcagttgaatcaacttaatatgcgcatgcagcaaaatcttgatcatcagata
caagccaagaacagaacaggcgtttctgaagaaaagcttaaagaatttacttctatgttt
aaacactttgataaagatcgaacaggtttcttagagcatcaagagtttaaatcatgtctt
cgatcattaggatacaatctaccgcttgttgaagaaggggcagatgatcctgagtttaaa
tcgattttatttaccgttgatccaaacaatgatggtgttgtatcactaaatgaatatata
gcatttatgataagtcgcgagactgagaatgtaaaatctgctaaagaagtcgatgaagca
tttagagctataactgacggtggaaaacagatatacgtcactgagcaagagttatatcag
gctttaactcgtgagcaagctgaattctgtatgtctcgtatgaaaacttacgttgacaag
aatggaagagaattgccaggttactttgattatggtttgttttgcgaagaactgtttgtt
gcataa
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