Hydra vulgaris (swiftwater hydra): 100206113
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Entry
100206113 CDS
T01080
Name
(RefSeq) ribosomal RNA processing protein 1 homolog B
KO
K14849
ribosomal RNA-processing protein 1
Organism
hmg
Hydra vulgaris (swiftwater hydra)
Brite
KEGG Orthology (KO) [BR:
hmg00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
hmg01009
]
100206113
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
hmg03009
]
100206113
Protein phosphatases and associated proteins [BR:
hmg01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
100206113
Ribosome biogenesis [BR:
hmg03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
100206113
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nop52
Motif
Other DBs
NCBI-GeneID:
100206113
NCBI-ProteinID:
XP_012556249
UniProt:
T2MF08
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All DBs
Position
4:19777437..19803881
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AA seq
644 aa
AA seq
DB search
MAKDTRPQEKNKVGSAEIHFAKKLANNDKKIRDRAFVKLKSWLLAKEKTNDGLNFTELLK
IWKGLFYCMWYSDKPLVQEELAANLANLIHIFNRSSNNGILFSKVFFVTIGREWIGIDRL
RLDKFYFLIKLFIHETLKCLQNLEWNYQNVLQHSKFLNECFLDEKFPDSLKIYLTEKTLP
ELSVLIDSSDKMPKDDVLVLLVEPFLTAIAFTLSDSVFKAVREEVLNKIEALENIKMPLK
LIADRLTTLAAEKAVKTRNRKVLHIYARRFHEADSVEGTKSKLKNKSEESVILEQPIIKK
KKTGDTEMCNDVSMQKSKKKKKKKKKLSQVESISTELNNNLEKCSDDKTNSFTETNINIA
PTSNENDNSSCHVNDHAPLISSSSFASQSNSISLPPLTNTIKPALQLDSNSPVQDVDSTD
IAMQIESEHSSEKLTCLVNDTVKQKLDFMSDFELADNQPKSESADDTATKNSLQTPTDIT
NESNINNEIISEDQQLCHLVDQSIENDDDKTEKTSQNIMKDSVEKELKEVKRERRSLRKK
NNEKGSPKSSVTYIKTPVTKAFLNRQMRTICGKIKNETDTTSTDFTTPQPEKRKVRIELS
KNMAVGHKELKISPLPAFNPLLQPNKSAMKVYSTRSRAKASDFM
NT seq
1935 nt
NT seq
+upstream
nt +downstream
nt
atggcgaaagacacgaggccgcaggagaaaaataaagttggcagcgcggaaattcatttt
gcaaagaaattagcaaacaacgataaaaagattcgagatcgagcttttgttaaattaaaa
tcatggttgcttgcaaaagaaaaaactaatgatggtctaaattttacagagcttctgaaa
atttggaaaggtttgttttattgtatgtggtattctgacaagccacttgttcaagaagag
cttgcagcaaatttagcaaatctaattcacatatttaatagatcttcaaataatggaatt
cttttttcaaaagtcttttttgttactattggcagagaatggataggtattgatcgattg
aggctagacaaattctattttctcatcaaactttttattcatgaaactttaaaatgcttg
caaaacttagaatggaattatcaaaacgttttgcaacacagcaaatttctcaatgaatgt
tttttagatgaaaagtttccagatagcttaaaaatttatttaacagagaagacacttcct
gaactttctgttttaattgacagcagcgataagatgccaaaggatgatgtattggtgtta
cttgttgaaccatttttaactgctattgcttttacattaagtgattcagtgtttaaagct
gttcgtgaagaagttttaaataaaattgaagctctcgaaaatattaaaatgcccttaaag
ttaatagctgatcgtcttactactttggcagctgaaaaagctgttaaaacaaggaataga
aaggttttacatatatatgctagaaggttccatgaagctgattctgttgaaggtactaaa
agtaaattaaagaataaaagtgaagaaagtgtgattttagagcagcctattattaagaag
aaaaaaacaggagacacagaaatgtgtaatgatgttagtatgcaaaagtcaaagaaaaag
aagaaaaagaaaaagaaactttctcaagtcgaaagtattagtacagagttaaataataac
ttagaaaagtgttccgatgataaaactaatagttttactgaaacgaatataaacattgca
cctacttctaatgaaaatgataatagttcttgtcatgttaatgatcatgctcctcttatt
agttcttccagttttgcctcacagagtaattccattagccttcctcctttaactaatact
atcaaacctgctctacagcttgactcgaatagtcctgttcaagatgttgattctactgat
attgctatgcaaattgaatctgaacattcaagcgagaagttaacctgcttagttaacgat
acggtaaaacaaaaattagattttatgtcagatttcgaacttgctgataatcagccaaaa
tctgagtcagcagatgatactgccacaaaaaattcacttcaaacaccgacagatattacg
aatgaatcaaacataaataatgaaattatttcggaagatcaacaattgtgtcacttagtt
gaccagtctattgaaaatgacgacgataaaactgaaaagacttctcaaaacataatgaaa
gactctgtagaaaaagaattaaaggaagttaaaagggagcgtagaagtttacgaaaaaaa
aacaatgagaaaggctcgcctaaatcgtcagttacttatataaaaacacctgtaacaaaa
gcatttcttaatagacagatgcgaacaatatgtggaaaaattaaaaatgagacagataca
acttcgacggatttcacgactcctcaacctgaaaaaagaaaagttcgaatagaactttca
aaaaatatggctgtaggtcacaaagaattaaagattagtcctttaccagccttcaatcct
ttacttcaacccaataaaagcgcaatgaaagtttactcgacacgatctagagccaaagct
tcggattttatgtga
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