Hydra vulgaris (swiftwater hydra): 100206229
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Entry
100206229 CDS
T01080
Symbol
LOC100206229
Name
(RefSeq) general transcription factor 3C polypeptide 3 isoform X1
KO
K15201
general transcription factor 3C polypeptide 3 (transcription factor C subunit 4)
Organism
hmg
Hydra vulgaris (swiftwater hydra)
Brite
KEGG Orthology (KO) [BR:
hmg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hmg03021
]
100206229 (LOC100206229)
Transcription machinery [BR:
hmg03021
]
Eukaryotic type
RNA polymerase III system
Basal transcription factors
TFIIIC
100206229 (LOC100206229)
TFIIIC, fungi type
100206229 (LOC100206229)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_14
TPR_2
TPR_12
TPR_19
TPR_6
TPR_8
TPR_10
TPR_1
TPR_SusR
CFAP70_TPR_C
TPR_20
HrpB1_HrpK
T7SS_EccA1_N
Motif
Other DBs
NCBI-GeneID:
100206229
NCBI-ProteinID:
XP_065680147
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All DBs
Position
07:17458756..17512586
Genome browser
AA seq
971 aa
AA seq
DB search
MVCIFLSFLSFLLTNMENVPMLSEPNVPMLSEPELLRYLNGEISFETWLKNQNIDYTESQ
DNNPLASSLKEASESLNFGCKLPDDESTIFSSWGSIFSDKNEKKKKVKKNRISEKIDLVE
ESQILELKNTLPTAASAEFFDTPLRSVSFSNVSDYNAEDDSLQGVELKSLMLKLPSVIST
STANKHIKLKKQKDLEQDIFQDLHNFQFRKRTYAVRQKLSEMARLQLGQANMLVAKGDFK
QAAEICMDVVKEVPSSGEPFKTLSFIYDEQGNKEMALQYALVSAFLDCKDAQEWRDLAQR
CINEGSETQALACYDRACKVLSTDACLQWDRATMYFEKQDYRKTLDILFTIMKIIKPTHL
EDFMVIAKEISKLYHKFGLTDRSREMLEVACKMCINVKDYESIHLLCEMYMAIKEYDKLL
KLIVKTCDVKLPEDVFKKKDCGVNFSEIAAQVSSSQFTDLSSHIVAKLTESSSQIIDQPS
NTIDICSKSVESFYVPIELPLDIRVKLAQGLVYLNELNYVESITEPLFSEDLNDVGDLML
DLAESYYETGNYQLALKYLLELVECVKFNQAAVWLKIAESFDYLNEKEKSINAYYMVLSL
VPQHVSVRMTLASLLRSVGRADEAVTVISEYEVTFNDNSETCVSELSKLKVEECEMLYKK
CLKLYDDSNYKDFLCDGYILIHNYLLWSFGYQKQMLIGRAQMWQFLLKILNVAMDLKEHQ
KAIKLVNKAILFKPYQESRKYRLELDYLQTTIYFVAGEYAKAFESFRILIMHETEEVIDK
NTIWNLFALITNKMMDKRHHRYVLRLLFRKPLRVPLIMINGNNSFVSGTYKYAIGEYLRC
FREWPTNPLTSLLLAVSYLHLACQKFHKTRHASIIQGLIFMFQYMSLRKENQESHYNMGR
AFHQIGLVHFATFYYNKALEFPMHNEKESNKAEYHPFIDLHREAACNLAMIYKASGNIEL
AKKTLYKYCWV
NT seq
2916 nt
NT seq
+upstream
nt +downstream
nt
atggtctgtatatttttatcttttctaagttttttgttgaccaacatggaaaatgtacca
atgttatctgaaccaaatgtaccaatgctatctgaaccagagcttttgcgttacttgaat
ggagaaatttcatttgagacatggttaaaaaatcaaaatattgactacacagaatcacaa
gataataatcctttagcttcttcgctgaaagaagcatcagaaagcttaaattttggttgt
aaattacctgatgatgaatcaactatattttcttcttggggaagtattttctctgataaa
aatgaaaaaaagaaaaaagttaaaaagaatagaatttcagaaaaaatcgatttagtagaa
gaaagtcaaatacttgaactgaaaaacacattaccaacagcagcttcagcagagtttttt
gacactccattaagatcggtatcattttctaatgtgtctgattataatgctgaagatgat
tcattacaaggtgttgaacttaaatcactaatgttaaaattgccatcagttatttcaact
tctactgcaaataaacatatcaaattgaagaaacaaaaagatttagaacaagatattttt
caagatttacacaattttcagtttcgcaagagaacatatgctgtaagacaaaaattaagt
gaaatggcaaggttacaacttggtcaagcaaatatgcttgttgcaaaaggagattttaag
caagctgctgagatttgtatggatgtggtgaaagaagtaccatcaagtggggaacctttt
aaaacattgtcatttatctatgatgaacaaggaaataaagagatggctttgcagtatgca
ttggtttctgcttttcttgattgtaaagatgctcaagaatggagggatcttgctcaaaga
tgtattaatgaaggaagtgaaacacaagctcttgcatgttatgatagagcttgcaaagtt
ctttctacagatgcctgtttacaatgggatagagcaactatgtattttgagaaacaagat
taccgaaagacacttgatatcttatttactataatgaagataataaagcctacacattta
gaagattttatggttatcgctaaagaaatttcaaaattgtatcataaatttggcttgaca
gatcgatcaagagaaatgcttgaagtagcatgcaagatgtgtataaatgtcaaagattat
gaaagtattcatttactttgcgaaatgtatatggcaatcaaagaatatgataaactttta
aagcttattgtcaagacttgtgatgtaaaacttcctgaggatgtttttaaaaaaaaagac
tgtggcgtaaatttttcagaaatagctgctcaggtttcatctagtcagtttactgattta
tcctcacatatagttgcaaaactcactgaatcatcttcacagatcatagatcagcctagt
aatactattgatatatgctcaaaatcagtagaaagtttttatgttccaatagaactacca
cttgacatccgagttaaacttgcacaaggtcttgtttatttaaatgagcttaattatgtt
gagagcataacagaaccactgttttctgaagatcttaatgatgttggtgatttgatgctt
gatctcgctgaatcatattatgagacaggaaattaccagttggcattgaaatatttacta
gagctggttgaatgtgtcaaatttaaccaagcagctgtatggttaaagattgctgagagt
tttgattatttgaatgaaaaggaaaaaagcattaatgcttactatatggtcttatcactt
gtacctcagcatgtatctgttcggatgacacttgctagtctgcttagaagtgttggcaga
gctgatgaagccgtcactgttatttcagaatatgaagtgacattcaatgacaacagtgaa
acatgtgtcagtgagctgagcaaactgaaagttgaagaatgtgaaatgctttataaaaaa
tgtttaaaactttatgatgacagcaattacaaagattttttatgtgatggctatattttg
attcataactatctcttgtggagctttggttatcaaaagcaaatgttaattggtagagct
caaatgtggcagtttcttttaaagatactgaatgttgctatggatttaaaagaacatcaa
aaagctattaaactggtgaataaagcaatcttatttaaaccttatcaagaaagtcgaaaa
tatagactagagcttgactacctgcaaacaaccatatattttgttgctggcgagtacgca
aaagcgtttgaatcttttcggattttaattatgcatgaaacagaagaggttattgataag
aatacaatttggaacttgtttgcattaataacaaataaaatgatggacaaaagacaccat
cgttatgtgctaagattgctgtttagaaaacctttgcgtgtacctttaataatgatcaat
ggaaataattcatttgtatctggaacttataaatatgcaataggtgagtatcttagatgt
tttcgggaatggccgacaaatcctttaaccagcttacttttggctgtatcctatctccac
cttgcatgccaaaagttccataaaacaagacacgccagtataattcagggattgatattt
atgtttcaatatatgagtctaagaaaagaaaaccaagagtctcactataatatgggaaga
gcttttcatcaaattggtcttgtacattttgcaacattttattataataaggctttggaa
tttccaatgcataatgaaaaggaaagcaacaaagctgagtatcatccgtttattgattta
cacagagaagcagcttgtaacctagccatgatatacaaagctagtggtaacatagaactt
gcaaaaaaaacattgtacaaatattgctgggtttaa
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