Hydra vulgaris (swiftwater hydra): 100206246 Help Entry 100206246         CDS       T01080                                  Name (RefSeq) DNA ligase 1 isoform X1   KO K10747   DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7] Organism hmg  Hydra vulgaris (swiftwater hydra) Pathway hmg03030   DNA replication hmg03410   Base excision repair hmg03420   Nucleotide excision repair hmg03430   Mismatch repair Brite KEGG Orthology (KO) [BR:hmg00001]  09120 Genetic Information Processing   09124 Replication and repair    03030 DNA replication     100206246    03410 Base excision repair     100206246    03420 Nucleotide excision repair     100206246    03430 Mismatch repair     100206246  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03032 DNA replication proteins [BR:hmg03032]     100206246    03400 DNA repair and recombination proteins [BR:hmg03400]     100206246 Enzymes [BR:hmg01000]  6. Ligases   6.5  Forming phosphoric-ester bonds    6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)     6.5.1.1  DNA ligase (ATP)      100206246     6.5.1.6  DNA ligase (ATP or NAD+)      100206246     6.5.1.7  DNA ligase (ATP, ADP or GTP)      100206246 DNA replication proteins [BR:hmg03032]  Eukaryotic type   DNA Replication Elongation Factors    Other elongation factors     100206246  Prokaryotic type    Elongation factors (archaeal)     Other elongation factors      100206246 DNA repair and recombination proteins [BR:hmg03400]  Eukaryotic type   SSBR (single strand breaks repair)    BER (base exicision repair)     Long Patch-BER factors      100206246    NER (nucleotide excision repair)     Other NER factors      100206246    MMR (mismatch excision repair)     Other MMR factors      100206246 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  DNA_ligase_A_M DNA_ligase_A_N DNA_ligase_A_C RNA_ligase Motif Other DBs NCBI-GeneID:  100206246 NCBI-ProteinID:  XP_047144201 LinkDB All DBs Position 11:35018868..35073685 Genome browser AA seq 910 aa AA seqDB search MGSLKKLVWLTQLNTHLNLLRLGKNHLFGNNLMLLRKNFIIFSIGRTSERLYLENEKSSD VKCKEDEHKDQTIDNPVVSLEKENEHSKSFLDASKTIINEEIPIKRKTARKTVVGPKKPN EQLRNDLQPIESTNKSFENSVKCDSPSKDPFDGNENHKIFNENVDNHTTASTKRKNNEES PEKSIDVKSSSFFAKKPRLEKKNKKLPVSLEETKEEILEPKLDVVDQPSPSHKKPDSVKN GKKDCLKPDCVKPDKFNPASSTYHPMKNACWCKNENVPYEALTRTFQEIEEISARLKIQS VLCNFFRSVIVLTPNDLLPCVYLCLNKLAPAYEGMELGIGENVLMKAVCSSTGKNMTQIK AEVAEKGDLGIVAESCRSNQRMMFAPPSLTVSGVFKKLKNIAEMTGHSSMAKKIEIIQQM FVACKNSEARYLIRSLGGKLRIGLAEQSVLSALGQAVVLTPPGQDYPPQIIDASTILSSE KLKAECDEASLAIKTAYCELPSYDIIIPQLLLNGWRKLPLTCHITPGIPLKPMLAHPTKG VSEVLKRFDDAKFVCEYKYDGERAQIHLLDNGEVKIYSRNQENNTSKYPDIVARIPKVIK THVRSCIIDTESVAWDQENKRILPFQVLTTRKRKDVEENDIKVQVCVHAFDLLYLNGESL VGKPFSKRRELLMSAFNQVEGEFVFATAKILSDTDEISEFLDESIQGNCEGLMLKTLDVD ATYEIAKRSHNWLKLKKDYLEGVGDTLDLVVIGGYHGTGKRTGKYGGYLLACYDEDNEEY QTICKAGTGFTDEQLAKHYEFFKNHVIEKPRSYYRFDDGMKPDHWFEPVQVWEIRAADLS ISPIYRAAIGIVDPDKGISLRFPRFLRVRDDKKPEEATLSQQVAEFYNNQDQIKNASDFK SKSKIEEDFY NT seq 2733 nt NT seq  +upstreamnt  +downstreamnt atgggatctttgaagaagttagtgtggcttactcaattaaatactcacctaaatctgttg cgattaggaaagaatcatctttttggtaacaatctaatgcttttgaggaaaaactttatt atattctctattggaagaacatctgaaagactttatcttgaaaatgaaaaaagcagtgat gttaaatgtaaagaagatgaacataaagatcagacaatagataatcctgtggtttctttg gaaaaagaaaatgaacattcaaaaagttttttggatgcttcaaaaacaattattaatgaa gaaattccaataaagcgaaaaacagcaagaaaaacagtagttggtccaaagaaaccaaat gaacaactaaggaatgatttacaacccatagaatctactaataagtcatttgaaaattca gtaaaatgtgattcaccaagtaaagacccttttgatggaaatgaaaaccataagattttc aatgaaaatgtagataatcatacaaccgcatcaacaaagcgcaaaaacaatgaagaatct cctgaaaaatcaattgatgtaaagtcttcaagtttttttgccaaaaaacctcgtcttgag aaaaaaaataaaaaacttccagtgtctttagaagaaacaaaagaagagatattagaacca aaattagatgtggtggatcagccttcaccatctcataagaaacctgattctgtaaaaaat ggcaaaaaagattgtctaaagcctgattgtgtaaaacctgacaaatttaatcctgcatct tctacttaccatcctatgaaaaatgcttgctggtgcaaaaatgagaatgttccttatgaa gctttaacaagaacttttcaagaaatagaggaaatatcagcaagattaaaaattcaatcg gtgctgtgcaattttttccgctctgttattgtcttgacaccaaatgatttgttgccttgt gtttatttgtgtttaaataaattagctccagcatatgaaggtatggaactaggaattggt gaaaatgttttgatgaaagctgtttgctcttcaacaggcaaaaacatgactcaaataaaa gctgaagttgcagaaaaaggagaccttggaatagttgcagagagttgtcgctctaatcag cgtatgatgttcgctcccccttcattaacagttagtggtgtcttcaaaaaattgaaaaat atagctgaaatgacaggtcattcgtctatggcaaaaaaaattgaaataattcaacagatg tttgtagcatgcaaaaattcagaagcaagatatttaattaggtcattaggtggtaaacta agaattggtcttgcagaacagtctgtgttatctgctttaggacaagccgttgtattaact cctccaggtcaagattatcctccacaaattattgatgcaagtacaattttgtcttcagaa aaactgaaggctgaatgtgatgaggcttcattggccatcaaaacagcttattgtgaacta ccatcatatgatataattatacctcaactgttgttaaatggttggagaaaattgccacta acatgccatataacaccaggaataccattaaaacctatgttggcacatcctacaaaagga gtgagtgaagttctaaaacgatttgatgatgcaaagtttgtttgtgagtataaatatgat ggagagcgagcccaaattcatttgcttgacaatggtgaagttaagatatatagcagaaac caagaaaataatacatctaaatatccagatattgttgcacgaatacctaaggtaataaaa acacatgtacggtcttgtattattgacactgagtctgtggcctgggatcaagagaataaa agaattctaccttttcaagtgttgacaacaagaaagcgaaaggatgtagaagaaaatgac attaaagttcaagtttgtgtacatgcgtttgacttgttgtacctaaatggcgagtcttta gtgggtaaaccatttagtaaaagaagggaattgctgatgtctgcatttaatcaagttgaa ggggaatttgtttttgctactgcaaagattctaagtgacacagatgaaatttcagaattt cttgatgaatctatacaaggtaattgtgaaggactgatgttgaaaactttagatgttgac gctacttatgaaattgcaaagcgatcccataattggttaaagcttaagaaagattattta gagggggttggagacacgcttgatttagttgttattggtggatatcatgggactggtaaa agaacaggaaagtatgggggatacctgctggcatgttatgatgaagataacgaggaatac caaacaatatgcaaggctggtactggcttcacggacgagcaattagctaagcactacgag ttcttcaaaaatcatgtcattgaaaaaccgcgctcgtattaccgatttgatgacggcatg aaaccagaccattggtttgaaccagtacaagtttgggaaatacgtgccgctgatttatct atctctccaatttacagagcagctattggaatcgttgatcctgataaaggaatttcgctt cgttttccgcgttttttacgtgtgcgagatgacaaaaagcctgaagaagctacattgtca caacaagtagctgaattttataataatcaagaccagattaaaaatgccagcgattttaaa tctaaatccaagatcgaagaagatttctactga

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