KEGG   Hydra vulgaris (swiftwater hydra): 100206290
Entry
100206290         CDS       T01080                                 
Name
(RefSeq) replication factor C subunit 3
  KO
K10756  replication factor C subunit 3/5
Organism
hmg  Hydra vulgaris (swiftwater hydra)
Pathway
hmg03030  DNA replication
hmg03410  Base excision repair
hmg03420  Nucleotide excision repair
hmg03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:hmg00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    100206290
   03410 Base excision repair
    100206290
   03420 Nucleotide excision repair
    100206290
   03430 Mismatch repair
    100206290
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:hmg03032]
    100206290
   03036 Chromosome and associated proteins [BR:hmg03036]
    100206290
   03400 DNA repair and recombination proteins [BR:hmg03400]
    100206290
DNA replication proteins [BR:hmg03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    100206290
  DNA Replication Termination Factors
   ELG1-RFC complex
    100206290
Chromosome and associated proteins [BR:hmg03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    100206290
DNA repair and recombination proteins [BR:hmg03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     100206290
  Check point factors
   HRAD17(Rad24)-RFC complex
    100206290
SSDB
Motif
Pfam: RFC_C RCF1-5-like_lid DNA_pol3_delta2 Rep_fac_C AAA Rad17 AAA_assoc_2 DNAX_ATPase_lid AAA_22 ABC_tran AAA_23 AAA_16 ATPgrasp_ST
Other DBs
NCBI-GeneID: 100206290
NCBI-ProteinID: XP_002167209
UniProt: T2MFG8
LinkDB
Position
2:62365952..62391837
AA seq 355 aa
MSLWIDKHRPTNLSKLTYHLEQAGRLKKLVNNADFPHLLIYGPSGAGKKTRIMCILRELY
GAGVEKVKLEQQSYLTPSKKKIEISSISSNYHIEINPSDAGIYDRVVIQELIKTTAQTHQ
LDSTSQKSFKVILLMEVDRLTKDAQHALRRTMEKYVATCRLILCCNSTSKVISAIQSRCL
GIRVPSPSTEEVVQTLNSVCKKEGLNLPSELANRIAQKAEGNMRRALLMCEACRVQQYPF
TADQSIQEADWETYLKQTANMIIEQQTPQRLMEIRTRIYELLTHCIPAEVIIKGLLRELV
KNCDGSLKCEIVQLAAHYEHRLQLGTKAIYHLEAFVAKFMSVYKRFFEEGMADMF
NT seq 1068 nt   +upstreamnt  +downstreamnt
atgagtctttggattgataaacatcgaccaacaaatctttcaaagttaacatatcatcta
gaacaagcaggtagattaaaaaaattggtaaacaatgctgatttccctcatcttttgata
tatggtccctcaggagcaggaaaaaagacaagaattatgtgtatattaagagaattgtat
ggagccggtgtagagaaggtgaaattggaacaacagagttatttgacaccctctaaaaag
aaaatcgaaatatcttcaattagtagcaactaccatattgaaataaatcccagcgatgct
ggaatttatgatcgtgttgtaattcaagagctaataaaaacaacagcgcaaactcatcaa
ctagattctacatcacagaaatcttttaaagttatacttttaatggaagtagatagatta
acaaaagatgcccagcatgctttgcgcagaaccatggaaaaatatgttgctacttgtcgg
ctaattttatgttgcaactcaactagcaaagtaatctctgctattcaaagtcgttgtctt
ggtattcgtgtaccttctcccagcactgaagaggtagtgcaaacacttaatagtgtatgt
aaaaaagaaggcctgaatcttcccagtgaattagctaatagaatcgctcaaaaggctgaa
ggaaacatgagaagagcattattgatgtgtgaagcatgtagagttcaacagtatccattt
acagcggatcagtctatccaagaagcagattgggaaacatacttaaaacagacagcaaat
atgattattgaacaacagacgcctcaaagattgatggaaattcgaacaaggatctatgag
ttgttgactcattgtattccagcagaagttattataaagggacttttaagagaacttgtt
aaaaattgtgatggaagccttaagtgtgaaatcgtgcaacttgcggcgcattatgaacac
agacttcagcttggaactaaagctatttatcatttagaagcatttgttgctaaatttatg
agtgtttataagcggttttttgaagaaggaatggcagacatgttttaa

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