Hydra vulgaris (swiftwater hydra): 100206371
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Entry
100206371 CDS
T01080
Name
(RefSeq) U3 small nucleolar RNA-associated protein 4 homolog
KO
K14548
U3 small nucleolar RNA-associated protein 4
Organism
hmg
Hydra vulgaris (swiftwater hydra)
Pathway
hmg03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
hmg00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
100206371
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
hmg03009
]
100206371
Ribosome biogenesis [BR:
hmg03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
100206371
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
ANAPC4_WD40
RMC1_N
Motif
Other DBs
NCBI-GeneID:
100206371
NCBI-ProteinID:
XP_002156689
UniProt:
T2M7Z8
LinkDB
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Position
1:complement(1669280..1685507)
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AA seq
656 aa
AA seq
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MSNYKVHRVRFVDYKPRSINCAAFDNDSKFPKVAFSREDGSIEIRDPACNWTLINTIPGQ
EGRTVEHLAWCDGRLFSGGMNSEIIEWNLELLKPLYQQDSYGGSVWSLKFSYSKKIVAVG
CEDGSIRLFDVLRNGIMYNRCLNKQEHRILSLSWSHDDLLIAAGGFDSKIRVYNVKSGRV
SVTMTTDNLKSNRTMVWSVNFLKDSTIITGDSLGNTQFWDGMTGTLLQSFKSHLADVLAV
AIYNDEKMVFTTGIDSKIVQFVLLQNEHKSSWIQTKHVRATQHDTRSLAICAEPYNCLVS
GGIDPRFVVHSLNNFSLEKCVFYPCLPQSSVCQLAPNGNLLLFREQQKLNIWKMNHINNN
DRVMPKKLFEIRANGHDHLICSAISHNGSYVAYSSLEKSQLFMLSVESSEGPSVQKIKLR
LCPAIVMCFSNSEKLLITVNKSINITHINSFKTELIELDKGIDLPFRHIVISKNDEYVCI
VDSKSKCLIFSLQERKYITSLPTLSGHVSCLNFHPKTNNLFVCTSDMFLYEFNIQEDMFM
PWLFDFNKTKLLTARKKNEEIQTITFPPKNYNQIILQLRNYIVKINYGTKILFPDDEAAS
QPKKSRQKGVYKTIRGFKDIMFFEFNSLNELVIVERPFKTILKSLPDPLNIKKFGT
NT seq
1971 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaattacaaagttcacagagtaagatttgttgattataaacctagatcaatcaat
tgtgcagcttttgataatgacagcaaatttcctaaagtagcattttcaagagaagatggg
tcaattgaaatcagagaccctgcttgtaattggacactgattaatactataccgggtcaa
gagggtcgcactgttgaacatttagcgtggtgtgatggtaggctattttctggtggaatg
aatagtgaaattattgaatggaatcttgaattattaaaaccactttatcaacaagattca
tatggcggatctgtatggagtttaaagtttagttattcaaagaaaattgttgctgtaggg
tgtgaagatggaagcattcgtttatttgatgttttacgaaatggtataatgtataataga
tgcttaaacaaacaagagcatcgcattttatcgctatcatggagtcatgatgatttattg
attgctgctggtggttttgacagcaaaattagagtgtacaatgttaaaagtgggcgtgta
tctgtgacaatgacaactgacaatcttaaatcaaatagaacaatggtgtggtctgttaat
tttttaaaagattctactattataacaggtgactcattgggaaacacacagttttgggat
ggaatgactgggacattgctacaatcttttaaatcacatcttgctgatgtattagctgtt
gcaatatataatgatgagaagatggtttttacaactggaattgatagcaagattgttcaa
tttgttttattacaaaatgaacataagtcatcctggattcaaacgaaacatgttcgtgca
actcaacatgatacaaggagtcttgccatttgtgcagagccttataattgtcttgtttct
ggaggaattgatccaagatttgttgttcattctcttaataatttttcattagaaaaatgt
gttttttatccatgtttacctcaatctagtgtgtgtcagttagcacctaatggaaatctt
ttgttatttcgtgaacaacaaaagttgaatatttggaaaatgaatcatatcaacaataat
gatcgtgttatgccaaagaagttgtttgagataagagcaaatggtcatgaccatttaatt
tgttcagctatatcacacaatggatcttatgttgcttattcgagtttagaaaagtcacaa
ctatttatgttaagtgttgaatcatcagaagggccttctgttcagaaaattaaactaaga
ttatgtcctgcaatagttatgtgtttctctaatagcgaaaaattactcataactgtcaat
aagtcaatcaatattacccatattaattcatttaaaactgagttaatagaactagataaa
ggtatagatcttcccttcaggcacattgttattagcaaaaatgatgagtatgtttgcatt
gttgattcaaaatctaagtgtctaatattttctttgcaagagagaaaatatattacatct
ttacctactctttctggtcatgttagttgtttgaattttcaccctaaaacaaataatttg
tttgtatgtaccagtgacatgttcttgtatgaatttaatattcaagaagatatgtttatg
ccatggttatttgacttcaataaaactaagttacttactgcaaggaaaaaaaatgaagaa
atacaaactataacttttcctcctaaaaattacaaccagattattcttcaattaaggaac
tacattgtaaaaattaactatggtacaaaaatactttttccagatgatgaggcagcatca
caaccaaaaaaaagtagacagaaaggtgtatataaaactatacgtggttttaaagatata
atgttttttgaattcaattcactcaatgagttggttattgttgaacggccattcaaaacc
attttaaagtctttacctgatccactgaacattaagaagtttggcacttaa
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