Hydra vulgaris (swiftwater hydra): 100207129
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Entry
100207129 CDS
T01080
Name
(RefSeq) E3 ubiquitin-protein ligase Topors isoform X1
KO
K10631
E3 ubiquitin-protein ligase Topors [EC:
2.3.2.27
]
Organism
hmg
Hydra vulgaris (swiftwater hydra)
Brite
KEGG Orthology (KO) [BR:
hmg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
hmg04121
]
100207129
03036 Chromosome and associated proteins [BR:
hmg03036
]
100207129
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
hmg03037
]
100207129
Enzymes [BR:
hmg01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
100207129
Ubiquitin system [BR:
hmg04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
100207129
UBL E3 ligases
100207129
Chromosome and associated proteins [BR:
hmg03036
]
Eukaryotic type
Centrosome formation proteins
Centriole proteins
100207129
Cilium and associated proteins [BR:
hmg03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
100207129
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PWI_Topors
zf-C3HC4
zf-C3HC4_2
zf-RING_2
zf-C3HC4_3
zf-RING_5
zf-rbx1
PWI
zf-RING_UBOX
Baculo_IE-1
zf-RING_10
zf-ANAPC11
Motif
Other DBs
NCBI-GeneID:
100207129
NCBI-ProteinID:
XP_012554996
LinkDB
All DBs
Position
13:4876497..4919999
Genome browser
AA seq
1275 aa
AA seq
DB search
MTSNFLNSDEEAVLRLRIDALKSASRKAFHRIEQSISSEMENESENELREMALKSISKDS
SKIRAKKTEASNIERKEPIKHSNDDLKLRQVALKSLLQKRLLKTEDLLKKANNKVMQQNV
QNKDESITPIKPSTKITDLKSKKIEDHKSVTKITKPKSSSKIIKTIKTRDKTVDKSLTQS
IQNTAECIVKQSKIESDQNGDDSMRDTFVRELSISKILVSQNEDDQISLCVSDNDDKELC
LSDNDDKVSCVSDHEGELLKNNTDLCKVKMTITDSKSNFDDLQSLEKSNDLFQLPIDCTP
LLSVVEHSFGSIDNNDIDFHNNNTTSKNNFSEDSKLCSEQSEILENQESRCITDLNSVKG
CDDISAEDKDLNMCENHAIDSNKTSSLVSNFCLDNNEPGPSGYKKSNDVVYDSDAEHSII
EITPPAKKTHLVIELSSDSDSSFVDKTSSLGNKALIKNKRRSKQKVIQEELSRQTTKSPG
REDMKDSICSVCLGPFENRSFLLECFHSFCHICIIQWSELSRTCPLCKTKYKSLIHSVNS
DLEYQQYTFPEESKLSDQVQTQRVQNGNDGRRFRYQTTLVDSHAWARRRAERERVENTLS
QGREQRKMSRRLKWSATKDRRKAVYRLHMHVKEVKQRGRPKLRDISCEFFKENPALKHRL
VPWLLRDLNVLLGDNDENIRFVMSLILNLISNISMECEEFKKQLEPFLFKETDHFIAELI
SFARSPYDIKGYDDNVVYDVSIHNPVHVIEDSLQERLLNDILDGNDDDDSRNIVTSIDVG
SNSTDSPIVQNIDTSPEVEVSPEVECSQEEVEEKLEEHDTDISRNKKKKKKKKRRKHKKR
SKENITESVSCVDNDDIDTERVIDGGNEEAVNDFGDKDISSGHQVTNNVRDNLSNDIREI
IDDGDNLSNDIREIVIDDGEIKEHLDDQNQKHKKYKKKHSKHRHKKRHRKHFDDELLETR
KHKRKRLDNEDAESLTHIHKKKKKEDNHHSSHDSKHKKKKKSNHHSRKRKHDNRDDCDIG
NEKCLDLGNSNIISCPDKTLINEDILIGDESTKTHSKKKKTEHKLERTHKTERKSDRTHK
KKAKKHKSKKKRKRNHSNNLNSNSHHDLTHVIDLRETEKKIESLFASISKRYNLPLMIPS
EEKIYDKTLLENESSKNTDFETMDKNAREVRDFIHNLNPQNNAYESRVDIVRELLRVEKA
LIKKKDRKERCPKTKIKQVAADSTVYDLPETLTYEPKKQFQNDKTYIALMSELQEIEGRL
SSCRSSFLKNNEKIV
NT seq
3828 nt
NT seq
+upstream
nt +downstream
nt
atgacaagcaattttttaaattcagatgaagaagctgttttaaggcttcgtattgatgct
ttaaaatctgcatctaggaaagcttttcatagaattgaacaaagtataagtagtgaaatg
gaaaatgaaagtgagaatgaacttcgtgaaatggcactaaaaagtatatcaaaagattcg
tcaaaaattcgtgctaaaaaaactgaagcttctaatattgagcgtaaagaaccaattaaa
catagcaatgatgatttaaagcttcggcaagttgcattaaagtcattactacaaaagaga
ttgttgaaaactgaagatttgcttaaaaaagcaaacaacaaggttatgcaacaaaatgtt
caaaacaaagatgaaagtataactccaataaaaccttcaacaaagatcacagatcttaag
tctaaaaagattgaagatcacaaatctgttacaaaaataacgaaaccaaaatcttcttca
aagatcataaagacaatcaagaccagagataaaactgttgataaatcactgacacagagt
attcaaaatactgctgagtgtattgtgaaacaaagtaagattgaatcagatcagaatgga
gatgatagtatgagagatacttttgttagagaattaagtatcagcaaaatattagtatca
caaaatgaagatgaccaaatttctctatgtgtatcagataacgatgacaaggaattgtgc
ttatcagataatgatgataaggtgtcatgtgtttcagatcatgagggtgaactgttaaaa
aataacacagatttatgtaaggtaaaaatgactattacagattccaaatccaatttcgat
gatcttcaatcgctagaaaaatctaatgatttgtttcaacttcctattgactgtactcct
ttgctaagtgtagtagaacattcttttggctcaattgacaacaacgatatagattttcat
aataataataccacttcaaaaaataatttttcagaggatagtaaattatgttcagagcaa
agtgaaattttagagaatcaagaatcaagatgcatcactgatttgaattctgttaaagga
tgtgatgatatatctgcagaagataaagatttaaacatgtgtgaaaatcatgcaattgat
tcaaataaaacaagttccttagtttctaatttttgtttggacaataatgaaccaggtcca
agcggttacaagaagtccaatgatgtggtatatgactcagatgctgaacattctattata
gaaataactccccctgctaaaaaaacccacttagttattgagttatctagtgactctgac
agttcttttgtggacaagacaagttctcttgggaacaaagcacttattaaaaacaaaaga
aggtcaaagcaaaaagttatacaagaagaacttagtcgtcaaacaacaaagtcgccagga
agagaagatatgaaggacagcatatgttcagtttgtcttggtccatttgaaaatcgatca
tttctgcttgagtgctttcattcattttgtcatatttgcattatacagtggtcagaatta
tctcgtacatgcccgctatgtaagactaagtataaatcacttatccactctgttaatagt
gatttggaatatcaacagtatacttttcctgaagaatcaaagttgagtgatcaagtgcaa
acgcagcgagttcaaaatggaaatgatggaagaaggtttcgctaccaaaccacacttgtt
gattctcatgcatgggcacgtagaagagctgagcgtgaaagagttgaaaatactctttca
caaggtcgtgagcaacgaaagatgtcaagaagattaaagtggtctgctacaaaagacaga
agaaaggcagtttatcgtttacatatgcatgtcaaagaagttaaacaaagagggcgacca
aaactgagggatatcagttgtgaattttttaaagaaaaccccgcactgaaacatcgattg
gtaccatggcttttgagggatttaaatgttcttcttggtgataatgatgaaaatatcaga
tttgtaatgagcttgattttgaatcttatatccaacatttctatggaatgtgaagaattt
aaaaagcagcttgagccgtttctttttaaggaaaccgaccattttattgcagagcttata
agttttgctcgctcaccttatgatattaaaggttatgatgacaatgttgtttatgatgtc
tcaatacacaatccagttcatgtaattgaagattctcttcaagagcgtttgttaaatgat
attttggatggaaatgatgacgatgattcaaggaatattgtcactagcattgatgttggt
tcaaattcaacagactcgccaatagtacaaaacattgacacttcaccggaagttgaggtg
tcacctgaagtggaatgttcacaggaagaagttgaggaaaagctagaagaacatgataca
gatatttcccgcaataaaaagaagaaaaagaaaaaaaagagaagaaagcataaaaaaagg
tctaaagaaaatattacagaatcagttagttgtgttgataatgatgacattgataccgaa
agagttattgatggtggtaacgaggaggctgtgaacgatttcggcgacaaggatattagt
agtggccatcaggttactaacaatgtccgtgacaatctcagtaatgatattcgtgagatt
atcgatgatggtgacaatctcagtaatgatattcgtgagattgttatcgatgatggtgag
atcaaagaacatttagacgatcaaaatcaaaaacataaaaaatacaaaaaaaagcactca
aaacatagacataagaagagacatcgaaaacattttgacgatgaacttttagaaacccgt
aaacacaaaagaaaacgtctggacaacgaagatgcagaatcattaacacatatccacaaa
aagaaaaaaaaagaagataatcatcatagttctcatgacagtaaacataaaaaaaaaaaa
aaatctaatcaccattcccgaaaacgtaaacatgacaatcgtgacgattgtgatatcggt
aatgagaaatgtctggatttaggaaactctaatataatatcttgcccggataaaacattg
ataaatgaagatattttaattggtgatgaaagtactaaaacccattcaaaaaaaaagaaa
acggaacacaagttagagcgaactcataaaaccgaacgtaaatcagatcgaactcataaa
aagaaggctaaaaaacacaaatcaaagaaaaaaagaaaacgaaatcattcgaacaatttg
aatagcaattctcatcatgatttaacacacgtgatagatttacgagaaactgaaaagaaa
atagaatcgctgtttgcaagtatttcgaagcgatataatcttcctttgatgataccttca
gaagaaaaaatttacgacaaaactttgcttgaaaatgaaagttcaaagaacacagacttt
gaaactatggataaaaatgcacgcgaagttcgggattttatccataacttaaatccccaa
aataacgcatacgaatcgcgtgtagatattgttcgggaattactgcgtgtggaaaaagca
cttattaaaaaaaaagatcgtaaagaacgatgtccaaaaactaaaataaagcaagtagct
gctgatagcactgtttatgatttgccagaaacattgacgtacgaaccaaaaaaacaattt
caaaacgacaaaacttatatagcattaatgagcgaactacaagaaattgagggacggtta
agttcatgtcgaagttcctttctaaagaataatgaaaaaattgtttaa
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