Hydra vulgaris (swiftwater hydra): 100207185
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Entry
100207185 CDS
T01080
Name
(RefSeq) phenylalanine--tRNA ligase beta subunit isoform X1
KO
K01890
phenylalanyl-tRNA synthetase beta chain [EC:
6.1.1.20
]
Organism
hmg
Hydra vulgaris (swiftwater hydra)
Pathway
hmg00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
hmg00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
100207185
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
hmg01007
]
100207185
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hmg03016
]
100207185
Enzymes [BR:
hmg01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.20 phenylalanine---tRNA ligase
100207185
Amino acid related enzymes [BR:
hmg01007
]
Aminoacyl-tRNA synthetase
Class II (U)
100207185
Transfer RNA biogenesis [BR:
hmg03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
100207185
Prokaryotic type
100207185
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA_synthFbeta
PhetRS_B1
B5
B3_4
EAD7
Motif
Other DBs
NCBI-GeneID:
100207185
NCBI-ProteinID:
XP_047130060
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All DBs
Position
4:complement(11565841..11618975)
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AA seq
600 aa
AA seq
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MPYVFQNGKMPTVSFRRDLLFEALGQEYTEEEFDELCFEYGLELDGVTSEKMMVSKEKGE
AKAGEASEEIIYKIDVPANRYDLLCLEGLTRNMLVFQQKMKIPHYKTVVPIRPQQLIIDK
AVEKIRPFAVGAVLRNITFTQASYNSFIDLQEKLHHNICRKRTLVSMGTHDLDKIEGPFT
YTAKPPNEIVFRALNQPKETSAIELMELYKSDNQLKHFLHIIEKEPLYPVIYDKNGIVLS
MPPIINSHHSKITLDTKNVFIEITATDEHKAKIVLDILTTSFSCYCKDKFSVEVIDLLKA
DGTITQTPLLAYREEVIQPKWANNIIGISISGKEMEILLNRMFIKSEMLPDGRLRCIIPP
SRADIIHACDIYEDIAISYGYNNIRKRIPNTSTIGYQLPINKLCDLVKMEIALAGFTEGL
TFCLCSKDDISDKLNHPEGLNEAVHIENPKGLDFEVARTTLLSGMLKTVANNKSHPLPVQ
VFEISDVVLLDSTKDVGARNERRLCAINCNKTPGFEVIHGLLDRLMTVLAVKPTNIASAP
SEGYHIRKSEDSAFFPGRCAEIVYNGTVIGKMGVIHPEVLQNFEIANPCAAFEINMEHFL
NT seq
1803 nt
NT seq
+upstream
nt +downstream
nt
atgccatacgtctttcaaaacggcaaaatgccaacagtaagtttcagaagagatttgttg
tttgaagcacttggacaagagtacacggaagaagagtttgatgaactttgttttgaatat
ggattggagcttgatggagttacatcagaaaaaatgatggtttctaaagaaaagggggaa
gctaaagcaggagaagcttcagaggaaattatttacaaaattgatgttccggcaaataga
tatgatcttctttgtttggaaggactaactcgaaatatgttggtttttcagcaaaaaatg
aaaattcctcattacaaaactgttgttccgattcgtcctcaacaattgattattgataaa
gctgtagaaaaaatcagaccttttgcagtgggtgcagttcttagaaatataacttttaca
caggcttcctacaatagttttattgacttacaagaaaagttacatcacaatatttgtcgc
aaaagaactctggtttctatgggaacacatgatttagataaaatagaaggtccttttaca
tatacagctaaacccccaaatgaaattgtattcagagcattaaatcaaccaaaggaaaca
tctgctatagagttaatggaattgtataagagtgataatcaattaaagcattttctgcat
attattgaaaaagagcccctctatcctgttatatatgataaaaatggtattgtcttgtcc
atgccaccgataattaacagtcatcactctaaaatcacacttgataccaaaaatgtgttt
attgaaataacagctactgatgagcacaaggctaaaatagttcttgatattcttaccaca
tcattcagttgttactgcaaggacaagttttcagttgaagtaattgatttattaaaagct
gatggaactatcactcaaacacctcttctggcatatagagaggaagtaatacaaccaaag
tgggcaaataacattattggaataagtataagtggtaaagaaatggaaattttgcttaac
cgaatgtttattaaaagtgaaatgttaccagatgggcgattaagatgtattattccacca
tctagagcagacattattcatgcatgtgatatatatgaagatattgcaattagttatggt
tataacaatattcgtaagagaatccccaacacctctactattggatatcaattgccaata
aacaagctgtgtgatttggttaaaatggaaattgcattggctggtttcactgaaggatta
actttttgcttgtgttcaaaagatgacatttctgataaactaaatcatccagaaggttta
aacgaagctgttcatattgaaaaccctaaagggcttgattttgaggttgcacgaactact
ttactttctggtatgctaaagacagttgcaaataataaaagtcatccactaccagttcaa
gtttttgaaatatctgatgtggtactattagattctacaaaagacgtgggagctcgaaat
gaacgccgtctatgtgcaatcaattgtaataagactcctggatttgaagttatacacgga
ttgttggatcgtttaatgacagtactagctgtaaaaccgacgaatatagcttctgctcca
tcggaagggtaccacatccggaaatctgaagattctgcatttttccccggtcggtgcgct
gaaatcgtgtataatggaactgttatcgggaaaatgggcgtcatacaccctgaagtactt
caaaattttgaaattgcaaatccttgtgctgcatttgagataaatatggaacattttttg
taa
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