Hydra vulgaris (swiftwater hydra): 100207272
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Entry
100207272 CDS
T01080
Symbol
LOC100207272
Name
(RefSeq) SNW domain-containing protein 1 isoform X1
KO
K06063
SNW domain-containing protein 1
Organism
hmg
Hydra vulgaris (swiftwater hydra)
Pathway
hmg03040
Spliceosome
hmg04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
hmg00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
100207272 (LOC100207272)
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
100207272 (LOC100207272)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
hmg03041
]
100207272 (LOC100207272)
Spliceosome [BR:
hmg03041
]
Complex B
Other components
Prp19-related factors
100207272 (LOC100207272)
Complex C
100207272 (LOC100207272)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SKIP_SNW
Motif
Other DBs
NCBI-GeneID:
100207272
NCBI-ProteinID:
XP_002157642
LinkDB
All DBs
Position
09:complement(19170902..19208176)
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AA seq
530 aa
AA seq
DB search
MSLTRLLPAPVQLMTLHDDNDDELEAAYYGGNQMSLASYGPPPYGHRAGWVPRRQEDFGD
GGAYPEIMVAQFPLGMGREWRETSNALPVIMDAEGKIKFDSLLRQSQPKNKIIHSRFEDL
VEKQVKAEDDPELARPDEEKMQEIAEKTRQALELEVNSKIAAAQPTQVAQKTAPAQYIRY
TPSHGGVMFNSGAKQRVIRMVEQQKDPMEPPRFKTNTKIPRGPPSPPAPVMHSPTRKTSV
KEQQEWKIPPCISNWKNPKGYTIPLDKRLAADGRGLQDPTINDKFAKLAESLYIADRKAR
EAVETRANLERKLAQQEQMKKETKLRELAEKARQERSGLHTASKNADEAERDAVRKDRQR
ERERDKRISKAGAEKKSKNIRDKDRDISEKIALGLPNTGVSQEAMYDQRLFNTNEGMDSG
FGEDDSYNVYDQPWRKTDAVSSIYRPSKNIDKDLYGDDIDSLIKSSKRFTADKEFAGSDR
NQVRDGPVQFEKEEEDPFQLDKFLQDAKRGGKRTDKSDKDHDKSSKRPKH
NT seq
1593 nt
NT seq
+upstream
nt +downstream
nt
atgtctttaaccagattacttccagcccctgttcaattaatgacacttcatgatgacaat
gatgacgagttagaagctgcttattatggtggtaatcagatgtcactggcctcctatggc
cctccaccatatggtcaccgtgctggttgggtaccacgaagacaagaggatttcggagat
ggtggagcatatccagaaataatggttgcacagttcccccttggaatgggaagagaatgg
agagaaacatcaaacgctcttccagttataatggatgctgaaggaaagatcaaatttgac
agcttattacgtcaatctcaaccaaaaaataaaataatacattctaggtttgaagatctt
gttgaaaagcaagtcaaagcagaagatgatcctgaacttgctcgacctgatgaagaaaag
atgcaagagattgctgaaaaaacaaggcaagcattagagctagaggttaattcgaaaata
gcagctgctcaaccaacacaagttgcacagaaaactgctccagctcaatatattagatat
accccatctcatggaggtgtgatgtttaactctggtgcaaaacaacgtgtaattcgaatg
gttgaacagcagaaagatccaatggagcctccgcgttttaaaacaaatacgaaaattcct
agaggtccaccatctcctcctgctccagttatgcactctccaactagaaaaacaagtgtg
aaagaacaacaagagtggaaaattcctccatgtatatcaaactggaaaaatcctaaaggt
tacacaattcctttggataaaagattagctgcagatggtagaggacttcaagatcccact
atcaatgataaatttgccaagctggctgaatcattatatattgctgacagaaaggctaga
gaggctgtagaaacaagagcaaatcttgaaaggaaactagctcaacaagaacaaatgaaa
aaggaaactaaattaagggaacttgcagagaaagcaaggcaggaacgatctggtttacat
acagcatcaaaaaatgctgatgaagctgagcgagatgctgttcggaaagatagacaaaga
gaacgagaacgagacaaaagaatatcaaaagcaggagcagaaaaaaaatcaaaaaatatt
cgtgacaaagatcgagacatcagtgaaaaaattgcactgggactaccaaatactggtgta
tctcaagaagctatgtatgatcaaagactattcaatactaatgagggaatggacagtggg
tttggtgaagatgatagttataatgtatatgatcaaccttggcgaaaaacagatgctgtt
tcatcaatatatagaccttcaaaaaatattgataaagatctatatggagatgacatcgat
agtttaattaaaagctctaagcgatttactgctgacaaagaatttgctgggtcagatcga
aatcaagtacgagatggtccagttcagtttgaaaaagaagaagaagatccatttcaactt
gataaatttttgcaagatgctaaacgtggtggaaaacgaacagataaatctgataaagac
catgataaatcttctaagcgcccgaagcattaa
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