Hydra vulgaris (swiftwater hydra): 100207347
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Entry
100207347 CDS
T01080
Name
(RefSeq) uracil-DNA glycosylase isoform X1
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
hmg
Hydra vulgaris (swiftwater hydra)
Pathway
hmg03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
hmg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
100207347
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hmg03400
]
100207347
Enzymes [BR:
hmg01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
100207347
DNA repair and recombination proteins [BR:
hmg03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
100207347
Prokaryotic type
100207347
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
FAS_meander
Motif
Other DBs
NCBI-GeneID:
100207347
NCBI-ProteinID:
XP_002166406
UniProt:
T2MGZ2
LinkDB
All DBs
Position
3:complement(8197281..8210722)
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AA seq
322 aa
AA seq
DB search
MASRKVLHTKQPSITSFFFNAKQSTPQQGLHQQQQRELFTDSFIKSKKVKLEQYSTYKKD
DENTLPIKNCISPEQKQRMELHKKEAEKKLRLKLFQEVKISEGWQDVINIEFQKTYFKNL
QQFVAEQRKTKVIYPPENEVYSWTQHFNINETKVVILGQDPYHGPGQAHGLCFSVKPGVP
PPPSLVNMYKELSNDIPGFKTPNHGFLLGWAKQGVLLLNAVLTVEKGLANSHKDKGWEKF
TDAIIHWINDNLKGVVFILWGGYAQKKGSFINKSSHLVLSGMHPSPLSAHRGFFGCKHFS
KANQYLRENNKQEIDWCCLPLE
NT seq
969 nt
NT seq
+upstream
nt +downstream
nt
atggcttctaggaaagtgcttcacaccaaacaaccttccattactagttttttttttaat
gctaaacaaagtacaccacaacaaggattgcatcagcaacaacagcgagagttatttaca
gatagttttataaaaagtaaaaaagttaaactggagcaatatagtacatataaaaaagac
gatgaaaatacgcttccaataaaaaactgtatatcacctgaacaaaaacaaagaatggaa
ttgcataaaaaagaagcagaaaaaaagttaagattaaagctttttcaagaagttaaaatt
tctgaaggttggcaggatgtaattaacattgagtttcagaagacttattttaagaatttg
caacagtttgttgctgaacaaagaaaaactaaagttatatatcctccagaaaatgaagta
tacagttggactcagcattttaatattaatgaaacaaaagttgttatattaggacaagac
ccatatcatggcccaggacaagctcacgggttatgtttcagtgtcaagccaggagttcca
ccaccgccaagtctcgttaatatgtacaaagagctatcaaatgatataccaggatttaaa
actccaaatcatgggtttctacttggttgggccaaacaaggtgttctactattaaatgct
gtgctcactgtggaaaagggtcttgctaattcacataaagataagggttgggaaaaattt
acagatgctataattcattggatcaatgataatctaaaaggagtagtttttatactgtgg
ggaggatatgctcagaaaaaaggaagtttcattaataaatcatcgcatttagtgctatct
ggtatgcatccttctcctctatctgctcatcgtggatttttcggatgtaaacatttttcc
aaagcgaaccagtatcttagagaaaataataagcaagaaatagattggtgctgtttgcca
ttggagtag
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