Hydra vulgaris (swiftwater hydra): 100207417
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Entry
100207417 CDS
T01080
Symbol
LOC100207417
Name
(RefSeq) rab5 GDP/GTP exchange factor isoform X1
KO
K20131
Rab5 GDP/GTP exchange factor
Organism
hmg
Hydra vulgaris (swiftwater hydra)
Pathway
hmg04137
Mitophagy - animal
hmg04145
Phagocytosis
Brite
KEGG Orthology (KO) [BR:
hmg00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagocytosis
100207417 (LOC100207417)
04137 Mitophagy - animal
100207417 (LOC100207417)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hmg04131
]
100207417 (LOC100207417)
Membrane trafficking [BR:
hmg04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
100207417 (LOC100207417)
Protein recycling
Other Rab GTPase associated proteins
100207417 (LOC100207417)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VPS9
DUF5601
zf-A20
Motif
Other DBs
NCBI-GeneID:
100207417
NCBI-ProteinID:
XP_002161816
UniProt:
T2M450
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All DBs
Position
02:10288161..10305905
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AA seq
580 aa
AA seq
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MAWLEDHHNRIPSSSKRLGAVLYCKTGCGFFGNPAWEGYCSKCFKEVSFQSKPGYEELLS
APIPELDILSTSESNVSQLKFDKFEEKKKQKQESKRDSIKKFFTKSPNVKVEAQSYTDSG
RKLKFDVAKEEIMTTSRDFIDFLKALKKPASKDIKDRCNRFIIGILQNQELSVQQQSLIV
QDFYVKMGNHIQSHPSFRDLPAEKLERMMDNIEKYIMTHIYKIAFSQPSSDDEKKDISIQ
KKIRSLHWVTYEQLEVNIDLNNSDVQKLLNKAFQDLQEMNTKRAPQDKLACIVNCSIAIF
QMLQIAQNELIASADDFLPALIYVVLKCNPTLLHSNIQYITRFCNPSKLMAGEGGYYFTN
LCCAVSFITDNLDAQSLNISEDEFNSYMKGEKPILRPKIIQKKYAVTCEGLQQMQLNLEE
IAELRECQAKTLEASRGFRKEMNLFKSEFNSQLKAIMENKYNFDCFATLLQKSMKQTENS
NGDNLPTEIKQENLFFDSLSFEDESKNDIFSFENPKTLNILTNDNDSIFDNKQSVNFSTP
PSDICADNLELSNSLNPDTHANLTTFEMDRNKQTGLLIDI
NT seq
1743 nt
NT seq
+upstream
nt +downstream
nt
atggcatggcttgaagaccaccataacagaattccgtcatcatcaaaacgtcttggtgct
gtactttattgtaaaactggatgtggattttttggaaacccagcatgggaagggtattgt
tcaaaatgttttaaggaagtatcatttcaaagtaaacctggttatgaagaattgctatct
gcacctattcctgagttagatattttatcaacgtctgaatctaatgtatctcagttaaag
ttcgataagtttgaagaaaagaaaaagcagaaacaggaatccaagagggatagcataaaa
aagttttttacaaaaagtccaaatgtcaaagtagaagctcaaagctacacagattctgga
agaaagctaaagtttgatgttgcaaaagaagaaattatgacaacatctcgagattttatt
gattttctgaaagctttaaagaaacctgcttccaaagatataaaagatagatgcaacagg
tttattattggtattttgcaaaatcaggagctttctgtacagcaacagagtttgattgtt
caggatttttatgtgaaaatgggaaatcatattcagtcccatccttcatttcgtgatttg
cctgcagaaaaacttgagcgtatgatggataacattgaaaaatatattatgacacatatt
tataaaattgcatttagtcagccatcaagtgatgacgagaaaaaagatatttctatccaa
aaaaaaatacgcagcttacattgggtcacttatgaacagcttgaagttaatattgaccta
aacaattcggatgtccagaaacttttaaacaaagcttttcaagacttacaagagatgaat
actaaaagagctcctcaagataagttagcctgtattgttaactgtagcattgcaatattt
cagatgcttcaaattgctcaaaatgaactcattgcaagtgctgacgactttctacctgct
cttatttatgttgttttgaagtgcaatccaaccttgctacattcaaatattcaatatata
actcggttttgtaatccaagcaaattaatggctggtgaaggaggttattatttcacaaat
ttgtgttgtgcagtttcgttcattaccgataatttagatgcgcagtcgttaaatatatct
gaagatgaattcaacagttatatgaaaggagaaaaaccaatcctcagaccgaaaataatc
caaaagaaatatgcagttacctgtgaaggtctacaacaaatgcagttaaacttagaagaa
attgccgagttacgtgaatgccaagcaaaaacgcttgaggcttctcgtggttttcgcaaa
gaaatgaacttgtttaaatccgaatttaattcacagttgaaagcaatcatggaaaacaag
tataatttcgattgtttcgcaacattgttacaaaaatctatgaagcaaacggaaaacagt
aatggagataatctacctacggaaataaaacaagaaaatttattttttgatagcttaagt
ttcgaagatgaatcaaaaaacgatattttttcttttgaaaatcctaaaacgttaaacata
ttgacgaacgataatgattcaattttcgataacaaacagtcagttaatttctcgacacct
cctagtgacatttgtgccgacaacctcgaattaagtaactcgttaaacccagacactcac
gctaatctaactacttttgaaatggatagaaacaaacaaacaggattgttaattgatatt
taa
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