KEGG   Hydra vulgaris (swiftwater hydra): 100207477
Entry
100207477         CDS       T01080                                 
Name
(RefSeq) DNA polymerase epsilon catalytic subunit A
  KO
K02324  DNA polymerase epsilon subunit 1 [EC:2.7.7.7]
Organism
hmg  Hydra vulgaris (swiftwater hydra)
Pathway
hmg03030  DNA replication
hmg03410  Base excision repair
hmg03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:hmg00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    100207477
   03410 Base excision repair
    100207477
   03420 Nucleotide excision repair
    100207477
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:hmg03032]
    100207477
   03400 DNA repair and recombination proteins [BR:hmg03400]
    100207477
Enzymes [BR:hmg01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     100207477
DNA replication proteins [BR:hmg03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   DNA polymerase epsilon complex
    100207477
DNA repair and recombination proteins [BR:hmg03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     DNA polymerase epsilon complex
      100207477
SSDB
Motif
Pfam: DUF1744 POL2_thumb DNA_pol_B_exo1 zf-DPOE DNA_pol_B zf_DPOE_2 DNA_pol_B_exo2 RNase_H_2 CP2 Cript
Other DBs
NCBI-GeneID: 100207477
NCBI-ProteinID: XP_047131452
LinkDB
Position
4:complement(56780900..56848594)
AA seq 2253 aa
MVLFNSGKWKKKEEEISDDGSGIEARLLSTIKKDSVDAKYGFTKHKDPVEKCGWLINMHP
TEIQDEDKKLLSAVDYYFIQDDGNRFKVSLPFNPYFYIAAKEGTERELATYLNKKYAGLI
ASIETVEKEDLDLLNHLTGLKKSYIKLSFYNEKEQMKLRKEIQPLIKKNKEREKAYSTYT
MVTGNTDSNNDGTSSKTNLMDNILDIREFDVPYHVRVSIDLKIFVGHWYKVKVHGGLNVS
IKICPELLHRPDPVVMAFDIETTKLPLKFPDSAIDSIMMISYMVDGQGYLITNREIVSED
IEDFEYTPRPEYEGPFIIFNEPDEASLLRRWFDHILELKPNIFVTYNGDFFDWPFIDARA
KVYGISMIEEIGFSPDAQKEYKSTYGIHMDAFRWVQRDSYLPVGSQNLKAVTKAKLRYNP
VEVDPEDMVRMTSEQPREMASYSVSDAVATYYLYMQYVHPFIFALCTIIPMEPDEILRKG
SGTLCEALLMVEAFHANIIFPNKQEQIHTKFYDGHLLETETYVGGHVEALESGVFRSDIP
CKFRMVPEAFQGLIDNCYETLKTTIENEHGVPIDCVTNIDELCKEICDQLATLRDTPNRL
EKPLIYHLDVAAMYPNIILTNRLQPSALVDEVICASCDFNRPGARCQRKMTWMWRGDFSP
ANYGEYQNIKQQLEVEKHPGRFPNEPTRSFHKLSPFEQAVLEKKRLSAYSHKAYKKVKIT
KSEVRESIICQRENAFYIDTVRAFRDRRYEFKDLLKVWKNKVSAAKDKGDPAEIKYASGM
EVLYDSLQLAHKCILNSFYGYVMRKGSRWFSMEMAGIVCYTGAHIITAARELVEQIGRPL
ELDTDGIWCILPASFPENFQVKTTHLKKPKITISYPGAMLNYIVQSGFTNDQYHDLINPE
HLEYKVRSENSIFFEVDGPYKAMILPASKEEGKKLKKRYAVFNEDGTLAELKGFEVKRRG
ELQLIKIFQSSVFESFLEGKSLESVYSCVAKCADYWLDVLYSKGETLPDNELFELISENR
SMSRSLDDYGSQKSTSISTAKRLAEFLGDQMVKDKGLSCRFIISCKPEGSPITERAIPLA
IFQTEDSIKKHYLKRWLKVQDNFDFDIRNILDWNYYIDRLNSCIQKIITIPAAMQGIANP
VPRCRHPDWLHKRLLEKNDVFQQKRITDMFSKVPELVEKENSVTDLEDIVGKRSLTSPSM
PVVHKRRKVDKNVENSEFMESDLLKSWREVLGSPPSMGATKEDQHAWILFHKRKWLFQKL
QRNAARKSREKLKNSNMADNFGDIRRVNPQAGLSNFFKKQTRSILECHWEIIQIAETDTP
GIFNLFVMVNNDLHSINVTVPRVFYVNSRKLKSGDGATWRKVNKILPRSQPSFFLYEYSI
PEVIYKDYSSELVADLSSPDIEGIYETQVPLDIRAVTKLGCLCKVHRNVARALNGRDVDS
FDISQLDYKTLAEHSYLESQSLKHLFFYHAQLESRAVFVIFLSPLQKTYVFILNTVRSNQ
MPNLANMYTTERTNRILERKEQDEVYNPPETVSFTFDVQVETDSKILFRNINRVLTQYQD
EKKGPTMILLQAQTDQRHLKSQINALKGYPIVEMPKIEIDISQFTALDWQRQLAKRFIHS
YLDTNDWLEAQLLNARYFHIPIGNIPSGDAALYAADIFYARHLQKHNHLLWMSSTDRPDL
GGKEEDDNRIVTEIDEGGSPEINQPGCYSTVCVELSLDAIAVNTVLQSQHIHDAEGVDQS
FDIVQQASLEEMLNSGPGSISNLTTYDEGAACSASFRILKSLVFNWFSEVVTYKNPFADN
QLIHFYRYLRSPEAMLYDPALCRFIHGLMKKYFMQLISEFKKLGSTIVYASFNKIILNTK
KRKLKDGLAYVQYIMNSILSKMLFKSIRLEPKACWEYLLWMDKSNQGGIYLSEIPNNFYK
NGELCISTVDDEEDTDLVSLAKQKKVEMNWNICKFLPTAGSCQNFFQIAIAGHIHAVYVH
IIEETARLPSGVDTPVKRRGISTQLERMAETVCTPSMVQFSQERIQNVLTEQLFGITQKI
HRSVSTSVNKDGDPVFPLLAGSYLPLKSPGLEFVKAVCQVLRLDVNIQSQVDKLKRDLLK
LIGVGSFADEANFQDPCMSLVVPEVICEYCNSCRDLDLCRDACITPARGNQPASIRCSNP
ECGVNYSLEVIEQHLISMLMRRSMTYTLQDLKCTKCKMIKDKNMSKYCDCAGTYSNNIPR
DQFMQKLKIYENISKHYHLENLSEMIEFINKYN
NT seq 6762 nt   +upstreamnt  +downstreamnt
atggtactgtttaattctggaaagtggaagaaaaaagaagaagaaatttctgatgatggt
tctggaattgaagctcgacttttatctaccataaaaaaagatagtgttgatgcaaaatat
ggtttcacaaagcacaaagatcctgttgaaaaatgcgggtggttaataaatatgcacccg
acagaaattcaggatgaagataaaaaacttcttagtgctgttgactattattttattcaa
gatgatggcaatagattcaaggtttcattgccatttaacccttatttctacatcgcagct
aaagagggaacagaaagagaacttgcaacttacctcaataaaaaatatgctggcttaata
gcttcgattgaaacagttgaaaaagaagacttagatttgctaaaccacttgactggttta
aagaaaagttatatcaaactttcattttataatgaaaaagaacaaatgaaattgaggaag
gaaatccaaccacttatcaagaaaaataaagaacgcgaaaaagcttattctacatataca
atggtaactggtaatactgattcaaacaacgatggtacatcctcaaaaacaaatttaatg
gataatatacttgatatacgtgaatttgatgttccatatcacgtgagagtatcaattgat
ctaaaaatatttgtgggtcattggtataaagttaaagttcatggcggtttaaatgtcagc
atcaaaatatgtcctgagttacttcacagaccagacccagttgtcatggcatttgatatt
gaaacaacaaaattaccattaaaatttcctgattcagcaattgactcaattatgatgatt
tcatatatggttgatggacagggctatttgataacaaatagagagatagtgtctgaagat
attgaagactttgaatatacgccacgccctgagtatgaagggccattcattatttttaat
gaacctgatgaggcaagtctactacgccgttggtttgatcatatattggaactcaagcca
aatatatttgttacatataatggtgatttttttgattggccctttattgatgctcgtgca
aaggtatatgggatatctatgatagaagaaataggatttagcccagatgctcaaaaagaa
tacaaatccacttatggaatacacatggatgcttttaggtgggtgcaacgagacagttat
ttaccagtgggaagccaaaatttaaaagctgttacaaaggcaaagcttcgttacaatcct
gttgaagttgatcctgaagatatggttagaatgacaagtgagcagcccagggaaatggca
agttattcagtatctgatgcagtcgccacttattatctctacatgcaatatgttcatccg
tttatatttgctttatgtacaatcattccaatggaacctgatgagatacttcggaaagga
tctggaacattatgtgaagctttgctcatggtagaagcatttcatgcaaacatcattttt
ccaaacaaacaagagcagattcatactaaattttatgatggtcatctgcttgaaacggaa
acatatgtaggtggacatgttgaagcattagagagtggtgtttttagaagtgacatacct
tgtaaatttcggatggtaccagaagcatttcaaggtcttattgataattgttatgaaaca
cttaaaacaaccattgaaaatgaacatggtgtaccaattgattgtgtaacaaacattgat
gagctttgcaaagagatctgtgatcaacttgctacattgagagataccccaaatcgactt
gagaagccattaatctatcatcttgacgtagcagctatgtatcctaatataattttaaca
aatagattgcagccttctgctctagttgatgaagttatatgcgcatcatgtgattttaac
agacctggtgcacgttgtcaacgtaaaatgacttggatgtggagaggagattttagtcca
gcaaattatggggaatatcaaaatataaaacaacagcttgaagttgaaaaacatcccggg
agatttcctaatgagccaacacgttcttttcataaactttcgccgtttgaacaagcagtc
ttagaaaaaaaaaggttgtcagcctattcccacaaagcatataaaaaagtaaagataacg
aagagcgaggtaagagagtcaataatatgtcaacgagagaacgcattttacattgatact
gttcgagcctttcgtgatcggagatacgagtttaaagatttactaaaggtttggaaaaat
aaagtttcagctgcaaaagataaaggtgatccagcagaaataaaatatgcttctggaatg
gaggttttgtacgattctcttcagcttgcgcacaagtgtatcctaaactcattttatggt
tatgttatgagaaaaggatcacgttggttttctatggagatggctggaattgtttgttac
actggtgcacatattattactgcagctagagaacttgttgagcaaattggtcgtccttta
gagctagatactgatggtatttggtgcattttaccagctagttttccagaaaactttcag
gttaaaacaacacatcttaagaaaccaaaaataacaatatcttatcctggtgcaatgcta
aattatattgttcagtctggattcacaaatgatcagtaccacgatttgataaatccagaa
catcttgagtataaagtacgaagtgaaaactcaattttttttgaagttgatggaccttat
aaggcaatgatcttaccggcatctaaagaagaaggtaaaaagttaaaaaaacggtatgca
gtttttaatgaagatggtactttggctgaattgaaaggttttgaagttaagagacgtgga
gaattgcaacttattaagatatttcaatcatctgtatttgaatcatttttggaaggaaaa
tcattggaatctgtttattcttgtgttgctaagtgtgctgactattggttggatgttctt
tatagcaagggtgaaactttacctgacaatgagctttttgagttaatttcagaaaatcga
agtatgtctcgctcacttgatgactatggctcacaaaaatcaacatcaatcagtactgcc
aagcgtcttgctgagtttcttggagatcaaatggttaaagataaaggccttagttgtcgc
ttcataatatcatgcaaacctgagggctcacctataacagaaagagctatccctctagcc
atttttcaaacagaagatagtattaaaaaacattatttaaaacgatggctcaaagttcag
gacaattttgactttgatataagaaacattttggattggaattattacattgatcgtcta
aacagctgcattcaaaaaataattacaataccagcagctatgcaaggaattgcaaatcct
gtaccaagatgtagacatcctgactggttgcacaaacgattacttgaaaaaaatgatgtt
tttcagcaaaagcgaataactgatatgttttctaaagtaccagaattggttgagaaagaa
aatagtgtcacagatttagaagacattgttggcaaacgatctttaacttctccatcaatg
cctgtggtccataagagaagaaaagttgataaaaatgttgaaaattctgagtttatggaa
agtgatttattaaaatcttggagagaagtcttaggaagtcctccatctatgggtgcaact
aaagaagaccaacatgcttggattttgttccataaaaggaaatggttgttccagaaactg
caacgaaatgctgctcgcaagtctcgggagaaattaaaaaatagcaatatggcagacaac
tttggtgacatacgaagggttaatccacaagcaggactttctaacttttttaaaaaacag
acaagatcgattcttgaatgtcattgggaaataatacagatagctgaaacagatactcct
ggtattttcaacttatttgtgatggtaaacaatgatcttcattctatcaatgtaacagta
ccacgcgttttttacgtcaactctcgtaaacttaaatcaggagatggtgcaacatggcga
aaagttaacaaaattcttcctcgatcccaaccctctttttttttgtatgagtattcaata
ccagaagtcatttataaagattatagcagtgagcttgttgcagacttgtcttcacctgat
attgaagggatctatgaaacacaggttccactagatattcgtgctgtgacaaagcttggc
tgtttatgtaaagtccacagaaatgttgcaagagcattaaatggaagagatgtagattcg
tttgatataagtcaacttgattacaaaacattggcagaacattcttacttggaatctcag
tcattaaaacatttattcttttatcatgcccaacttgaaagtcgtgctgtttttgtaatt
tttttatctcctctacaaaaaacatatgtgtttattttaaatactgttcgaagcaaccaa
atgccaaacttagcaaacatgtatacaacagaaaggaccaatagaattcttgaacgaaaa
gaacaagatgaagtatataatcccccagaaactgtgtctttcacatttgatgtgcaagtc
gaaacagattctaaaatattatttcgcaacataaatcgtgtactgacgcaataccaagat
gagaaaaaaggtcccacaatgatcctattgcaggctcaaacagatcaaaggcatcttaaa
tcacaaataaatgcattaaaagggtatcctattgtagaaatgcctaaaatcgaaatcgac
ataagtcagtttactgctctcgattggcaaagacagttagctaaaagatttattcattct
tatttggatacaaatgattggttggaggctcaacttttaaatgctcgttatttccatatt
ccgattggtaatattccctctggtgatgctgcattatatgctgctgatattttttatgcc
agacatttgcaaaaacataatcatttgctatggatgtcctctactgatcgaccagatctt
ggtggtaaagaagaagatgacaatagaattgtgactgaaattgatgagggaggaagtcct
gaaattaatcagccaggttgttattcaacagtctgtgtagaattatcccttgatgcaatt
gcagttaacactgttctacaatcacaacatatccatgatgcagaaggtgttgatcaaagc
tttgatattgttcagcaggcttctttagaagaaatgctaaactctggcccaggttccatt
tcaaatttaactacatatgatgaaggagcagcttgctcagcttcgtttagaattttgaaa
agtttggttttcaattggttttctgaagttgtaacatacaagaatccatttgctgataac
cagctcattcatttttatagatatttgcgttcaccagaagcaatgttatatgacccagct
ttgtgtagatttatacatggtcttatgaagaaatactttatgcagctgatctcagagttc
aaaaaacttggttcaactattgtttatgcaagttttaataaaattattctcaacacaaag
aagagaaaattaaaagatggtctggcatatgtacagtacataatgaatagcattctatca
aagatgttgtttaaaagtatacgcttagaaccaaaagcatgctgggaatatctactttgg
atggataaatctaatcaaggaggaatctacctttctgaaattcctaataatttctataaa
aatggtgaactatgcatatcaacagttgatgatgaagaagatacagatcttgtatcatta
gcaaaacagaaaaaagtggaaatgaattggaacatttgcaaatttcttccaacagcagga
tcatgtcaaaacttctttcagattgctattgctggtcatatccatgctgtttatgtacat
ataattgaggaaactgcaagattgccatctggtgttgatacccctgtgaaaagaagaggt
atcagtactcagctagaacgtatggcagaaacagtatgtacacctagtatggttcagttt
tctcaagaaagaattcaaaatgttctcactgaacaattatttggaattactcaaaaaatt
caccgctctgtttcaacatctgttaataaagatggtgacccagtgtttcctttacttgcg
ggatcctatctacctttgaaaagtccaggacttgagtttgtgaaagcagtttgtcaagtt
ttacgtcttgatgtaaatattcaaagtcaagtagataaattgaaaagggatttgttaaag
ttgataggtgttggaagttttgctgatgaagcgaattttcaagacccatgtatgtccctg
gtagtgcctgaggtgatctgtgaatactgcaatagctgtcgagatttagatttatgtcgc
gatgcttgtataactcctgccagaggaaatcaaccagcaagtattcggtgctctaaccct
gagtgtggtgttaattactcattagaagtcatcgaacagcatcttatttcaatgttaatg
cgtcgctctatgacgtataccttacaagatctgaagtgtactaaatgcaaaatgattaaa
gacaaaaatatgtccaagtattgcgactgtgctggtacctatagtaataatattccacgg
gatcaatttatgcaaaaattaaagatttatgaaaatatatcaaagcattaccacttggaa
aacttatctgaaatgatcgagttcatcaataaatataattga

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