Hydra vulgaris (swiftwater hydra): 100207545
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Entry
100207545 CDS
T01080
Name
(RefSeq) polycystin-2-like
KO
K04986
polycystin 2
Organism
hmg
Hydra vulgaris (swiftwater hydra)
Brite
KEGG Orthology (KO) [BR:
hmg00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
hmg03037
]
100207545
04040 Ion channels [BR:
hmg04040
]
100207545
Cilium and associated proteins [BR:
hmg03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
100207545
Ion channels [BR:
hmg04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
100207545
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PKD_channel
Polycystin_dom
Ion_trans
EF-hand_1
EF-hand_6
EF-hand_7
DAGK_prokar
Motif
Other DBs
NCBI-GeneID:
100207545
NCBI-ProteinID:
XP_012560622
UniProt:
A0A8B7DRZ2
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All DBs
Position
2:complement(23148079..23193086)
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AA seq
794 aa
AA seq
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MSAKKRLRSMQLSELSLRAENKNQRSNSTTVFKLEHSVNTSNDSSEPTNQNTNEATAESY
FTYKSYEDYPDTSHESWGKKFCRGFRGLWKTRQTEDDCSQEMIVKTSLRELTIYLFFVLI
VSIITFGMSSSTMYFFNQSLIGLFTGPNPPSIMTISTIATSNDFFEYLDKVLLNGLYTEQ
YYNGDNIPEIERGYVLFENKLLGLPRLRQVRVKNDSCLVHPFFKNSVYECYAPYSSGNEF
KENIESFNQNGIYHSEAEISGRSFSGQVSTYGGGGYIALLNTTNDDSNSTIQNLMKMRWI
NRGTRAVFIDFTVYNANINLFCVITLLFEFPATGGCMASATYRSLKLLRYVTDSDYFVMG
CEYIFVVFILYYLIEELLEIQKNKLSYFYDVWSIFDLLVLCIGIFCVAFNIYRTISVGKL
LQDLLENQDQYANFGFLSEWQTRFNDFAAVGVFISWIKIFKFIKFNKTMSQLQSTLARGA
KDIAAFAVIFMLVFLAYAQLGYLLFGCLVQDYSTILSCIYSLFRIILGDFTFSDLQNAQP
TLGPIFFITFVFFVFFILFNMFVAIVNETYAEVKIEIALQKDEFQLGDYFKRGYNNMMTK
LKLKKENIVNIQEALQFSDKNKDKTVDFEEWRLELKKRGHSDVEIAAVFSKYDNDGDRIL
NEEEISKMNKDLETQKNQLNDEIEDVTQQQATWETDIESFNDNESDDESETALEMDRAKG
VQNGLIRYKEYTILARRVDRLEHNIGSIVSKLDSLFVKLETMDQAKKQRRETMKQLLDII
EKQNLPGLTETLKI
NT seq
2385 nt
NT seq
+upstream
nt +downstream
nt
atgagtgcgaaaaaaaggttaagaagtatgcagctctctgaactaagtctccgagcggaa
aataaaaaccagcgatctaattctacaacagtatttaaactcgaacattcagtaaataca
agcaatgatagcagcgagccaacaaatcaaaatacaaatgaagcaacagcggaatcttat
tttacatataaaagttatgaagattatcccgatacatctcatgaaagttggggcaaaaag
ttttgtagaggttttcgaggtctttggaaaactagacaaactgaagacgattgcagccaa
gaaatgattgtgaagacctcactgagagaactgacaatttacttattttttgttttaatt
gtgtctataattacatttggcatgagcagttcgactatgtacttcttcaaccagtcatta
ataggtctttttactggccccaatccgccgtcaataatgacaattagtactattgcaacg
tcaaatgattttttcgagtatttggacaaagtattgcttaatgggctttacactgagcag
tattataatggggataatatacctgaaattgaaagaggttatgttttatttgaaaacaaa
ttgttgggtttaccaaggcttcgtcaagttcgagtaaagaatgattcgtgtttggtccac
ccattcttcaagaatagcgtttatgaatgttatgccccatattcttctggaaatgaattt
aaagaaaatattgaaagtttcaatcaaaatggaatatatcattcagaagcagaaattagt
ggcagatctttttcagggcaagtatcaacatatggtggcggtggctatattgcattacta
aacaccacaaatgatgattcaaattctactatacaaaatcttatgaaaatgcgatggatt
aatcgaggcacaagagctgtttttattgattttaccgtttataatgctaatatcaactta
ttttgtgttatcacattgttgtttgagtttccagcaactggaggttgcatggcatcagcc
acctatagatcattaaaattattgcgctatgttactgattcggattactttgtgatgggt
tgtgaatatatatttgttgtatttattctgtattacttaattgaagagctgcttgagatt
caaaagaacaagttatcttatttttatgacgtgtggagtatttttgatcttcttgttctt
tgcattggaattttttgtgtcgcttttaacatctacagaacaatatcagttggaaaatta
ttgcaggacttattggaaaatcaagaccaatatgcaaattttggttttttaagtgaatgg
caaactcgattcaatgattttgctgctgttggtgtttttatttcatggataaagatcttc
aagttcataaaattcaacaaaacaatgtcacagctacaatcaactttagctcgtggtgca
aaagacattgctgcatttgcagttatatttatgcttgttttcttagcatatgctcaatta
ggttatttactttttggctgtcttgtacaagattattcaacgattctgagctgcatttac
tcattgtttcgcatcattcttggagattttaccttttctgacctccaaaatgcgcaacca
acattgggtcccatattttttatcacatttgtgttttttgtgttctttattcttttcaac
atgtttgtggctatagtcaatgaaacttatgcagaagtaaaaatagaaattgcattgcag
aaagatgaatttcagctgggtgattacttcaagagagggtacaataatatgatgactaag
ctgaagttaaagaaagaaaatattgttaacatacaggaagcccttcaattttccgataaa
aataaagacaaaactgtggactttgaagaatggagattagaacttaaaaaacggggtcat
tctgatgttgaaattgcagctgttttttcaaaatatgataatgatggagaccgcattctt
aatgaagaagagattagtaaaatgaataaagatttagagacgcaaaagaatcagctaaat
gatgaaattgaagatgtaacacaacaacaagcaacatgggaaactgatattgaaagtttt
aatgacaacgaaagtgatgatgaaagtgaaacagctttagaaatggatagggcaaaagga
gtacaaaatggtcttatcagatacaaagagtatactattttggcgcgacgcgttgatcga
cttgaacataatattggaagcattgtttccaaacttgattctttgttcgtaaagctggaa
accatggatcaagctaagaagcaacgtagagaaacaatgaaacaactcttagatattatt
gagaagcaaaatcttcctggtttaactgaaactttaaaaatttaa
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