Hydra vulgaris (swiftwater hydra): 100207576
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Entry
100207576 CDS
T01080
Name
(RefSeq) WD repeat and HMG-box DNA-binding protein 1
KO
K11274
chromosome transmission fidelity protein 4
Organism
hmg
Hydra vulgaris (swiftwater hydra)
Brite
KEGG Orthology (KO) [BR:
hmg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
hmg03036
]
100207576
Chromosome and associated proteins [BR:
hmg03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Other sister chromatid cohesion factors
100207576
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_WDHD1_1st
Mcl1_mid
Ctf4_C
WD40
Beta-prop_EML_2
WD40_CDC20-Fz
WD40_Prp19
EIF3I
WD40_MABP1-WDR62_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
Beta-prop_HPS5
WDR55
Beta-prop_WDR35_TULP_N
Beta-prop_EML
Beta-prop_IFT140_1st
ANAPC4_WD40
Beta-prop_RIG_2nd
Beta-prop_WDR75_1st
Beta-prop_WDR19_2nd
Beta-prop_Vps41
HMG_WDHD1
Beta-prop_WDR75_2nd
NBCH_WD40
Beta-prop_RSE1_2nd
Motif
Other DBs
NCBI-GeneID:
100207576
NCBI-ProteinID:
XP_047139275
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Position
8:complement(45589543..45679089)
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AA seq
1122 aa
AA seq
DB search
MLSINDVRTAHSEGPTFAAYDSLNCSIVTAGSDGDIRIYPGLYDEESASVSLGLKITCLA
VQSDIIVIATDFHEVKCYKLPELEVLHNILLRFTSPINYVCISKNKEICAAASSDFTIKA
ANTDGTSQKTFSGHSAPVLSLCFTNNFESLISNSCDGTIRLWNVLDQMCTKVIDILPKSN
SASQYLGVMAIYDKTLAVPIGNNIKLISTQTWKDDNLILKQHSEKVSYVSISTCGKYLAS
GSSNGELFTWNLLNKSIIKQYIHPQNKGITSLSWKEKESEILFANVDGEFGFVEVLEKNV
DNDEDVQNDQSFNDDKFEEDFSLKKAKKRINENDIEFEEDLLTSAKKRHRVNNLNNFLDD
NDDSDTDDDDPNISLNLIKEGLLPKPNKEPIVNENDDSNSIVLPITEKEKKPVFHLPFQP
SSTPPHLMHRFMVWNSIGIIRCHSEDEISSIDVEFHNASTHYPLHIANVLNNTMGTLSNT
VIVLAAEKDGDTPSKVTCHHFSTWDSNKEWSLSLPLNESIQVIAANESYVILATTQQYLR
FFTISGIQTQICHLPGSVVTMAVHDKQLLIVYNRAIGYSSYHCLGVLCMHFIKNSWKVYS
DNPLNLRDHLSLVWLGFSTEGSPVYVDSSGDVFLWQRQNSLWVPVTNTKSQAKNKADNFW
VIGVEEQEGKIRCILCKGANIPSTLPRPVPTFIPFQVPLCEMTSEKSIKESELLKTSLIL
SNMEWNNKLSNNPVGDFESTEKQQVALLMQLFALACKSDRDFRAVEICQLMPNVESIGLA
IQYATKMRRMNLAQKLDDLARARASNNNEIEVEEENFFSDNDGLGLEELDENDSSTELVV
EKPTQLEQQSSYENDPCLDIQMSNEQELSRDSKKILKKNIIGDVRDNPFKVDKLIGTAVR
GTHRFESIETNPKRKSEDDTVLKKQPTNSGQRKIILPSKTKGDLATKTKENIKSEELPKK
KISGFQRFLEERQNGNQNDEDVLQSAMIDWKKLSADEKQKWNNGFAQKKIDDPKINDKEK
EIRANQIKNDGQEKEFKGQSKEIHESKKLNTKENIESKKNLKQNGIAKNNQPKKIVEKTG
GKLVKKTDDKVKAKALMETKNIKPSTSSTATLKSFAFKKNDT
NT seq
3369 nt
NT seq
+upstream
nt +downstream
nt
atgttatcaattaatgatgtgcgtacagctcattctgaaggaccaacatttgcagcatac
gactctcttaattgttctattgtaacagctggtagcgatggggatattcggatataccct
ggattgtacgatgaagaaagtgcttctgttagtcttgggctaaaaattacatgtcttgct
gttcagagtgatattattgtcatagcaacagattttcatgaagtaaaatgttataaacta
cctgagcttgaagtattacataatattcttttgcgttttacatcgccaataaattatgtg
tgtatatcaaaaaataaagaaatttgtgcagcagcctctagtgactttacaatcaaagca
gctaatacagatggtacttctcaaaaaacattttctggccattcagctccagttttaagc
ctatgttttactaataattttgaaagtttaatttcaaatagctgtgatggcacaattcgt
ttatggaatgttcttgatcagatgtgtacaaaagtgattgacattctccctaaatcaaac
agtgcttctcaatatcttggagttatggcaatttatgacaagactcttgctgttcctatt
ggaaacaatataaagcttatttctactcaaacatggaaggatgacaatttaatattaaag
caacattcagagaaagtttcatatgtttctatttctacttgcggaaagtatttggcttct
ggttcaagtaatggtgaattatttacatggaaccttttaaataagtctataataaaacaa
tacattcatcctcaaaataaaggtattacatctttatcatggaaagaaaaagaaagcgaa
atactttttgctaatgttgatggagaatttggttttgttgaagttttagagaaaaatgtt
gataatgatgaagatgttcaaaatgatcaatcatttaatgatgataaatttgaagaagat
ttttctttaaaaaaagcaaaaaaaagaatcaatgaaaatgatattgaatttgaggaagac
cttttaacgtctgctaaaaaacgccatcgtgtaaacaacttaaacaactttcttgatgat
aacgatgatagtgatactgatgatgatgatcctaatatatctttaaatttaatcaaagaa
ggattattaccaaagccaaacaaagaacctatagtcaatgaaaatgatgattcaaattct
atagttcttccaataactgaaaaggaaaaaaagccagtgtttcatttaccttttcaacct
tcatcaacacctcctcacttaatgcacagatttatggtatggaactccattggcataata
cgttgtcattcagaagacgaaatttcatcaattgatgttgagttccataatgcaagcact
cactatccattacatatcgccaatgttttgaataacactatgggaacactttcaaacact
gttatagttctggctgctgaaaaagatggtgatacaccaagtaaagttacatgtcatcac
ttttctacatgggatagtaataaagaatggagtctttcactacccttgaatgaaagcatt
caggtcattgctgcaaatgagagttatgtgattttagctacaactcaacaatatttgcgt
ttttttacaataagtggaattcaaacacaaatttgtcatcttcctggatctgttgttacc
atggcagttcatgacaaacaacttctaattgtttacaatagagctattggatatagcagt
taccattgtcttggcgtactgtgtatgcacttcataaaaaacagctggaaagtttattca
gacaatccacttaatttaagagatcatctttctttagtatggttaggtttttcaactgaa
ggatctccagtgtatgtagattcatcaggagatgtgtttttgtggcagagacaaaattct
ttatgggttccagtcacaaacacaaaaagtcaggcaaaaaataaagcagacaatttttgg
gtcattggtgtagaagagcaagaaggaaaaataagatgcatactttgtaaaggtgcaaat
attccctcgacattaccaagaccagttcccactttcataccattccaagttcctttatgt
gaaatgacaagtgaaaaatcaataaaagaaagtgagctattaaagacatctctaattctt
tcaaacatggaatggaacaataaattgtcaaataatccagttggtgattttgaaagtaca
gaaaagcagcaagttgcattgttgatgcaattatttgcgttggcttgtaaatctgataga
gactttagagcagttgagatctgtcaattgatgccaaatgtagaatctataggtttagct
attcaatatgcaaccaagatgcggagaatgaatttagcgcaaaaactcgatgatctagcg
cgtgctcgtgcttcaaataacaatgaaattgaagttgaggaagaaaatttttttagtgat
aatgatggtctaggattagaagaacttgatgaaaatgattccagtactgaattagttgtt
gaaaaacctacacagttagagcaacaatcaagttatgaaaatgatccctgtctcgatata
caaatgtcaaatgaacaagagttgtcaagagattcaaaaaagatattgaaaaaaaatata
ataggtgatgttcgagataatccatttaaagttgataagttgataggaacagcagtaaga
ggaactcatcgatttgagtcaatcgaaacaaacccaaaaagaaaatccgaagatgatact
gtattaaaaaaacaaccaaccaatagcggccagcgtaagataattttgccatccaaaaca
aaaggagaccttgcaactaaaactaaagaaaacataaaatctgaggagcttccaaaaaaa
aaaatatcaggtttccagcggtttttggaagaaagacaaaacggaaatcaaaatgacgaa
gatgttttacagtctgcaatgatagattggaaaaaactctcggctgacgaaaagcaaaaa
tggaataacggttttgcgcagaaaaaaatagacgatcctaaaataaatgataaagaaaaa
gagataagagccaatcaaataaaaaatgacggacaagaaaaagagtttaaaggacaatcg
aaagaaatacacgaatctaaaaagttaaacacaaaagaaaacatagaatcaaaaaaaaat
ttaaagcagaacggaatagctaaaaataatcaacctaaaaaaatagttgaaaaaacaggt
ggaaaactagttaaaaagacagatgataaagtcaaagcgaaggcgttaatggaaacaaaa
aatatcaaaccaagtaccagtagcacagcaactcttaaatcatttgcatttaaaaaaaat
gatacttga
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