Hydra vulgaris (swiftwater hydra): 100207695
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Entry
100207695 CDS
T01080
Name
(RefSeq) E3 ubiquitin-protein ligase UBR5-like
KO
K10593
E3 ubiquitin-protein ligase EDD1 [EC:
2.3.2.26
]
Organism
hmg
Hydra vulgaris (swiftwater hydra)
Pathway
hmg04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
hmg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
100207695
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
hmg04121
]
100207695
Enzymes [BR:
hmg01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
100207695
Ubiquitin system [BR:
hmg04121
]
Ubiquitin ligases (E3)
HECT type E3
100207695
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
E3_UbLigase_EDD
MLLE
PABC_AtC3H46
zf-UBR
Motif
Other DBs
NCBI-GeneID:
100207695
NCBI-ProteinID:
XP_047144545
LinkDB
All DBs
Position
12:29483295..29593690
Genome browser
AA seq
2494 aa
AA seq
DB search
MASVVIVSHHLKSSPEKFFDGLKELVKSKTNVSNWGTNLPELDASMIVQCVVGPNHLAFL
MSDGRVCRVAFHIVSESAKFYKQKEPSSDEEMPVPVSINKTPVSSSTSNAEEALNSRTDI
SFSLSGETLSSLSNQLSRWTSQRISTASTSSTGTITSLASRVASVRGRGRIIRATRGRIG
TGWLGSTSRALLPASAVPEDLIAQAQVVLQGKSRQVIIRELQKTSLDVNLAVNNLLSRDD
DDPDDDNEDSYIQEAYLPNDDLISIFEAGIPSEEPFVVQRDPLFPEDILLNPLYTRGEAY
HTTNRTQSSENNATNNREGRDMASSRLRDRWWGMIMKDDTKQRSSSKPTTQQKSRKATSN
VETSQRFGEIQWWRFKDESDDSIKFSQIASLHSELLAVTENGFLHRWRWADPESPVTEIT
GHVHPRAADMNLTDNEKIVKISSCNVRISILTESGKIAAWFDDTLSAVGHKLEQPLQTFS
EFKGNSISKLHVCDLYSCVQLSNGALYWWGVFPFEQRKKVLDKVKAKAKKSAISGSNLIK
SGTQVCIRSCPLYYPGAIGFTTVNGEPKVGELMEQAWTIVEKCRFKIVNAIPKIVDTSKH
IENQPDDQINENEDPGPSQHKRRRLDENSEDSSAQLPVIVKEEQWCLKDVIFVEEVRNVP
VGTVLKVDGAYALVDFSTKKVETGKCDIGSILDECRLVRKDELQIVKWTTPPKMPECFQR
TPKQLILPPNSKALSIALDTKGVRVLLKTQTGLRYVTFSLATGRAESGGDIQQAPSLFLS
KTQPHCSVLNSSGIDSLTLLQDPNQCLYPLIKDNSNGIRTPDLLNMPPVTCLAMGRRRVN
DTNKGHLIVAVMIVKDSDLVQSVLQSDAEAIHQFFSNCQIEKHINERVDGNRNIFHLCVS
TCKPLSPKPNKKNEEYYVSSPYSPSSPKSNKRNEDNSKTDIFDSSMWVPLFDGDSCLDIL
LSHSFLSQHLFQLLSERDAFGCTPFMYAVKIRAYTAALKLYNAAVDISRENGPKNKDKFM
AMICPPGTDPDISPLLVLCCNDTCSFTWTGTKHINQDIFECKTCGLVGPLCCCTECAQVC
HVGHECKLKRTSPTAYCDCWEKCPCKSLISGDQSARNQLLHKLVDETDLCTLPNNRGQHI
LLFLVHTVARQNTEQTQYVQKRNSSSDTSKSSGVRKVHSQKPLPYHDLEPPKFAKTTLLY
ILKNWLAVKSMILFGCNSTGIKRTQSLDDNIVMSSMLQADEISKYLDGQNGTTLLDNFVH
KLLVKCYGESLEALLQLFQQRLANIKKNQSDDENVETLNVINRFIRSVVRVYVLYTAPTE
TNQIKRKGISAVIMKCKRVFASLNVFAAKQIADIAASLFAPVRMGVVYPSAPFTLGTGLE
SAAACDDLFTVLPLPGRKDSVNPLRVRFADNDQADDTEEMESEESHGVASTTTEYHQYMD
MGETDSDSDDSQNGDGAETQSIEVSSETTLTSTQQTRSDTDGYFSTTEVSETEGEEDDED
PEDEDEDEEEEEDDNTTQLDLERAPPATSIADNSNTTPRVLQWAVRDTSSTTPSTSGSTR
ATSSGVYYIDTSRRSGASATSDGASTSLFSTPSALARTFAILVREVSDLLGQTSEDNSLA
GPCYPIEDNILKETRDTTDKILFKTWQWLWRVMELTESQLRFGASLTAVSDPMHPQHPLH
DVQNKPSRGSSSTSILNVWSEYSKKKKSSTNPLTDTSSSTRQDFLSYLLSLMRSHHNEHG
DSLPKVEITALQHLAYVLDAFIYYLRSNTVSSSEVILPAEFSLTESKSTNESKTTKTSGE
DDESDETDTDDFGNEIDTKASNHRFFKRSDSTLVLGYEPADSFAPLKEALPLADRPHLLT
PSGRRDQFFGVKKSTDSSFKLDSTFSLGLNDSTSCVLLMSPNVYLSRWHMCLELFGRVFL
DDVGSEPHSILNELGRFDVKEAKFKREMEKLKNGHQKDLYLEGLDRSRPLLLQQTLRQLN
SQFGRRLPGAGPLNIHRLKVSFKDEPGEGSGVVRSFYTAISNAFLTNERLPNLDNIFSGS
RGLTHQLRARAREREKDIRRGLEVTDMVPRNVRRHNDRSNADSASTLSIDALPYNPESES
SLQEDLTDIPVHKKELGKRLYSRIQAISPANANKITGMILELPPTQIIHILTSSESILIA
KVNEATELLNGKMSSSKSDPDALVDDYDSSYVFDNSPLFFQPGKPGYYSPRPGKNVIERI
NCFRNVGRIIGLCLLQNELCPLVFNRHVIKYLLGRKISWHDLAFFDPILYESLRQLIEDS
KREDSSKFFSDLDLTYCIQLRPEEGGGTVELVKGGSHVEVAPDNVHDYVKRYAEYRMVVN
SRRALQAMRRGLLDVIPANHLESLTAEDFRLLLNGIGNICIQQLMSYTFFSDETAGEGQE
KLTKFKKWFWSIVENMTPKQKQDLLYFWTSSPAMPASAEGFQPLPSVTVKPANDHQLPTA
NTCISRLYVPLYSSKAILRNKFLLAIKTKVFGFV
NT seq
7485 nt
NT seq
+upstream
nt +downstream
nt
atggcatcagttgtaattgtttctcatcacctgaaatcttcacctgaaaaattctttgat
ggattaaaggaactagtgaagtcgaaaacaaatgtatctaactggggaactaatttgcct
gaactagatgcatctatgattgtgcaatgtgttgtaggaccaaatcatttagcatttctt
atgagtgatggtcgcgtatgtagagttgcctttcatatagtcagtgaatctgcaaaattt
tacaaacaaaaggaaccaagcagtgatgaagaaatgcctgttccagtatccattaacaaa
accccggtgtcttcttcaacttcaaatgcggaagaagctttaaattctcgtactgatatc
tccttcagtctttctggagaaacacttagcagtttatctaatcagcttagtcgttggaca
tcacagcgaataagtactgcatcaacaagctcaacgggtactataacatcacttgcaagt
agagtagcatctgtgagaggtcgtggacgtatcattagagctactcgtggaagaattggt
actggctggttagggagtactagtagagctcttttaccagcttctgctgtacctgaagat
ttaattgcacaagcgcaagttgtattacaaggtaaatctcgacaagtaataattcgtgaa
ttacaaaaaacaagcctagatgtaaatcttgctgtaaataatcttctctctcgtgatgat
gatgatcctgatgatgataacgaagatagctatatacaagaggcttacttgcccaatgat
gacttaatttcaatatttgaagctggtattccaagtgaagagccttttgtagttcaaaga
gatcccctttttcctgaagatattcttttgaatccattgtacacaagaggggaagcatat
catacaactaatcgtactcaaagcagtgaaaacaatgctacaaataacagggaagggaga
gatatggcatcatctcggttacgtgatcgttggtggggaatgattatgaaagatgacacc
aagcaacgttcctcctccaaacctacaacacaacaaaaatctaggaaagctacatcaaat
gttgaaacatcgcagcgttttggggaaatccaatggtggagattcaaggatgaaagtgat
gattccataaagttttctcaaattgcatctttgcactctgaactgcttgctgttacagaa
aatggttttttacatagatggcgatgggcagatcctgagtcccctgtaacagaaataact
ggccatgttcatccacgagctgctgatatgaatttaactgataatgaaaaaattgtcaag
atatcatcatgtaatgttcgcatttctattcttactgagagcggcaaaattgctgcttgg
tttgatgatactttatcagctgttggtcacaaattggaacagcctcttcaaactttttct
gaatttaaaggaaattcaatatcaaaacttcatgtgtgtgatttatattcgtgtgttcaa
ctttcgaatggtgcattgtattggtggggagtgtttccatttgaacaacgaaagaaagta
cttgataaagtaaaagctaaagccaagaaaagtgctatcagtggcagcaaccttattaag
tctggaactcaggtatgcattcgaagctgtccactttattatccaggtgcaattggtttt
accacagtcaatggagaacccaaagttggtgagttgatggaacaggcatggactattgtt
gagaagtgtcgatttaaaattgtgaatgctatacctaaaatagtagacacaagtaagcat
attgaaaaccaacctgatgatcaaatcaatgaaaatgaagatcccggtccttctcaacat
aagcgcagacggcttgatgagaatagtgaagacagttctgctcagttgcctgttatagtt
aaagaagaacagtggtgtttaaaagatgttatttttgttgaagaagttcgcaatgtacca
gttggtactgtattaaaagttgatggtgcatatgcattagttgatttttctactaaaaaa
gttgagactggaaaatgtgatattggatcaatacttgatgaatgccgtctagttcgaaaa
gatgaattacagattgtaaaatggacaactcctccaaaaatgcctgagtgttttcaacga
acaccaaaacaattaatattaccaccaaattcaaaagctctttcaatagctttagatacc
aaaggtgtgcgtgttttgttaaaaactcaaactggtttacgctatgtgacttttagtttg
gcaacaggacgtgccgaatctggaggagatattcaacaggcgccatcattatttttatca
aaaactcaacctcactgttctgttttgaactcatctggaatagactcgcttaccttactg
caagatccaaaccaatgtttatatcctctaattaaagataacagtaatgggattcgtacg
cctgatttgttaaatatgcctccagtaacatgcctagcaatgggtagaagaagggtaaat
gatacgaacaaaggacatttaattgttgctgtaatgatagtaaaagacagtgatttagtc
caaagtgttcttcaatctgatgcagaagctattcatcaattttttagcaattgccaaata
gaaaaacatatcaacgagagagtggatggtaatcgtaatatttttcacttatgtgtttca
acgtgcaaaccattatcacctaaacctaataagaaaaatgaagaatattatgtttcgtct
ccttattcgccaagttctcctaagtctaataaaagaaatgaagacaactcaaagacggat
atatttgacagtagtatgtgggttccattgtttgacggagactcttgtcttgatatattg
ttgagccattcttttttatcgcaacatttgtttcaacttttatctgaaagagatgcattt
ggttgcacaccatttatgtatgctgttaagattcgggcatatacagcagctcttaagtta
tataatgctgcagttgatatctctagggaaaatggtccaaaaaacaaagataagtttatg
gcaatgatatgccctcctggtactgatcctgatatttcaccattactagtgttatgctgc
aatgatacatgttcttttacctggactggcacgaagcatataaatcaagatatatttgag
tgtaaaacatgtggtcttgttggtccactttgttgttgtacagaatgtgctcaggtgtgt
catgttgggcatgaatgcaagttaaaaagaacatctccaactgcatactgtgattgctgg
gaaaaatgtccatgtaaatcacttatttcaggtgatcaatctgcaagaaatcaactttta
cataaacttgttgatgaaactgatttatgcactttaccaaataatagaggtcaacatatt
ttgttgtttcttgtacatactgttgctcgccaaaacactgaacagacacagtatgttcaa
aagcggaactcctcctctgatacatcaaaatcatccggagtgcgcaaagttcattctcag
aaaccattaccatatcatgacttagaaccacctaagtttgcaaaaacaacactcttatac
atattaaaaaattggttggcagtgaaatcaatgattctttttggatgcaattcaactgga
attaaaagaactcaatcgttagatgataatatagtcatgtcgtcaatgctacaagctgat
gaaattagtaaatacttagatggacaaaatggaaccactttattagataattttgttcac
aaacttttagtaaaatgttatggggagtctcttgaggcattacttcaactttttcaacag
cggcttgcaaatataaagaaaaaccaaagtgatgatgagaatgttgaaacattaaatgtt
ataaacagattcatcagatctgttgttcgcgtttatgtgctgtatactgctccgacagaa
accaatcaaatcaagcgaaaaggaatatctgctgtgataatgaaatgtaaacgagttttt
gcatcattaaatgtatttgctgcaaagcaaattgctgacattgcagcttcattgtttgcg
ccagtcagaatgggagtggtttatccttctgctccttttactcttggcacaggtcttgaa
agcgcagctgcttgtgatgatttgtttactgttttgcctttgcctggtcgtaaagatagt
gtcaatccattaagagtcagatttgcagacaatgatcaggctgatgatacagaagaaatg
gaatctgaggaatcacatggtgttgcatcaacaactacagagtaccatcagtacatggat
atgggagaaacagatagtgattcggatgacagccaaaacggggatggagctgaaacacag
tctatagaagtatcaagtgaaactacattaacttcaacccaacaaacccgaagtgacact
gatggatatttctcaacaacagaagtctcagaaacagaaggcgaggaagatgatgaagat
ccagaagatgaggatgaagacgaagaggaagaagaggatgataacactactcagttagat
cttgagcgtgctccccctgctacaagtatagctgataacagcaatacaactccgcgcgtt
ttgcaatgggctgttcgagacacttcttccacaacgccatcaacatctggatctactcgt
gccacttcatcaggtgtttactatattgatacttcacgcagatctggagctagtgcaact
agtgatggtgcttcaacctcacttttctcaacaccaagtgcattagcaaggacctttgct
attcttgttagagaggtttctgacttgctgggacaaacttctgaagataatagtctagca
ggcccttgctaccctatcgaagataatatattaaaagaaactcgtgatacaacagataaa
attttgtttaaaacatggcaatggttatggagggtcatggagcttactgaatcacaatta
aggtttggtgcatcgctaacagcagtttcagatccaatgcatcctcagcatccactgcac
gatgttcaaaataaaccttctagaggatctagttctactagtattttgaatgtttggagt
gaatacagcaagaaaaaaaaaagcagcactaatcctctaactgatacctcatcatctacc
cgacaagattttctcagttatcttttgtcacttatgcgtagtcatcacaatgaacatgga
gattctttacctaaagtagaaataactgctttgcagcatcttgcatatgttcttgatgca
tttatatattacttacgctcaaatactgtttcttcatcagaagttatattaccagcagaa
ttttctctcactgaatcaaaatctacaaatgaaagtaaaacaacaaaaacatcaggtgag
gatgatgagagcgatgaaacagatactgatgattttggaaatgaaatagacacaaaagcc
tctaatcatcgatttttcaagcgaagtgattctacacttgtgttaggttatgaacctgct
gattcatttgctcctcttaaagaagctcttcctctcgctgatcgaccacatttgttaact
ccatctggaagaagagatcaattttttggtgtaaaaaagtctacagacagtagtttcaaa
ctcgattctacattttcgttgggtttaaacgattcaacaagttgtgttttacttatgtca
cccaatgtttacttaagtcgttggcacatgtgtttagagttatttggcagagtgttctta
gatgatgtagggtctgagcctcattcaatactaaatgagctaggtcgatttgatgtcaaa
gaagcaaagtttaaaagagaaatggaaaagttgaaaaatggacaccaaaaagatttatat
cttgaagggctggatcgttcacgtccactgttgttacaacaaacactgcgtcaactaaac
tcacagtttggccgtagacttccaggtgctggaccactaaacatacatagacttaaagta
tcatttaaagatgaaccaggtgaaggaagtggagtagttcgtagtttttacacagcaatc
agcaatgcttttcttacaaacgaaagacttccaaatcttgataacatcttttctggtagt
agaggtttgactcaccagctacgtgctcgtgctagagagcgggaaaaagatattcgacgt
gggttagaagttacagacatggtaccaagaaatgttcgtcgacataatgacagatcaaat
gctgatagtgcttctacattatctattgatgctctgccatataatccagagtctgaaagt
tctctgcaggaagatttaacagatattccagttcataaaaaagaacttggtaaaagatta
tactctcgaatacaagcaatctctcctgcaaatgcaaacaaaattactggcatgatattg
gagttaccacctacgcagattatacacatacttactagcagtgaaagtattttaattgca
aaagttaatgaagctactgagcttttaaacggaaaaatgagttctagtaagtcagatcca
gatgctttagtggatgattatgatagcagttatgtgtttgacaattcaccccttttcttt
caacctggaaagcctggttattattcaccacgtccagggaaaaatgtaattgaacgcatt
aactgttttcgaaatgttggaagaattattggtttatgcttactccaaaatgagttgtgt
cccttggtttttaatcgtcatgttattaaatatttacttggaagaaaaataagttggcat
gacttagctttttttgatccgatactatatgagagtttacgtcaacttattgaggatagc
aagcgtgaggatagctctaagtttttctcagatcttgatctaacatattgtattcagttg
cgacctgaagaaggtggtggtacagtagagcttgtaaaaggtggaagtcatgtagaagtt
gcaccagacaatgttcatgattatgtcaagcggtatgctgaatatagaatggttgttaac
tctaggagagcacttcaggcaatgcgtagaggattactagatgtcataccagcaaatcat
ttagaaagtttgaccgcagaagatttccggttgcttttaaacgggataggaaacatatgt
atccaacaacttatgagttacacattttttagtgatgaaacagcaggcgaaggacaagaa
aagttaacaaagtttaaaaaatggttctggtctattgttgagaatatgactcctaaacaa
aaacaggacttactttatttttggacctcttcccctgccatgcctgcaagcgccgaaggc
tttcaacctctaccttctgttactgtcaaaccagcaaacgaccatcaacttcctactgca
aatacatgtatctctcgactctacgttcctctatactcatcaaaagctatactgcgaaac
aaatttttattagcaataaaaactaaagtttttggctttgtctaa
DBGET
integrated database retrieval system
