Hydra vulgaris (swiftwater hydra): 100207767
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Entry
100207767 CDS
T01080
Name
(RefSeq) E3 ubiquitin-protein ligase Hakai
KO
K15685
E3 ubiquitin-protein ligase Hakai [EC:
2.3.2.27
]
Organism
hmg
Hydra vulgaris (swiftwater hydra)
Brite
KEGG Orthology (KO) [BR:
hmg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hmg03019
]
100207767
04131 Membrane trafficking [BR:
hmg04131
]
100207767
04121 Ubiquitin system [BR:
hmg04121
]
100207767
Enzymes [BR:
hmg01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
100207767
Messenger RNA biogenesis [BR:
hmg03019
]
Eukaryotic type
mRNA processing factors
3' end processing
N6-methyltransferase complex
100207767
Membrane trafficking [BR:
hmg04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
100207767
Ubiquitin system [BR:
hmg04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
100207767
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf_Hakai
Prok-RING_4
zf-RING_5
zf-RING_UBOX
Motif
Other DBs
NCBI-GeneID:
100207767
NCBI-ProteinID:
XP_047122663
LinkDB
All DBs
Position
13:complement(35072847..35104269)
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AA seq
367 aa
AA seq
DB search
MDHNMTDLELEDNPLSSAPHNVRKSINLNLTKKTKSKTKSSVKSNKSRSKRERDDGRSEE
SFDGKNLSRRNKSERKRENSEDERENEELDWSHKIMFVGEKIQNPVIHVCESCTLPILIY
GRLSPCKHVFCLSCAENSNGECVRCEERIDRIEPATIGQIFVCSFGGNRNITSGCRRSYL
SQRDLIAHIRHRHEKEGSTILENELLRQQGMPIFSIPPNLIAPPGMNLRASNAVVIAGLA
PNRQQQAIFVDANRMPILSSSQTQFNSLQPGVQLGQQFPAAYQYLPAQMSTSTTAIQNTQ
QQLTPSLQTVQQTNTRQDLHSSRVSTPQQSLAMRSHGDWGGSSPMTSAGQEWTNQGRGGG
YQPQFYK
NT seq
1104 nt
NT seq
+upstream
nt +downstream
nt
atggaccataacatgacagatctcgaacttgaagacaatcctttatcaagtgctcctcac
aatgtccgcaaatcgattaaccttaatctaacaaagaaaacaaaaagtaaaacaaaatca
tcagttaaatctaataaatcaagatcaaaaagagaaagagatgatgggcgaagtgaagaa
agttttgacggaaagaatttatctcgaagaaataagtcagaaagaaaaagagaaaatagt
gaagatgaaagagaaaatgaagaattggattggtctcataagataatgtttgttggtgaa
aagatacagaatcctgttattcatgtttgtgagagctgcactctgccgattcttatttat
ggtagactgagtccatgtaaacatgtgttttgtttatcatgtgcagagaatagcaatggc
gaatgtgtaagatgcgaggaacgaatagataggattgaaccagctacaattggacagata
tttgtatgttcttttggagggaatcgtaatattacttctggatgtcggcgaagttacttg
tcacagcgtgatcttatcgcacatattcgtcatcgacatgaaaaggagggttcaactatt
cttgaaaacgagcttttgagacaacaaggaatgcctatattcagtattcctcctaattta
attgctcctcctggtatgaatttacgtgctagcaatgctgttgttatagcagggttggct
cctaatcgtcagcagcaagctatatttgttgatgcaaacagaatgccaattctttcaagt
tcgcagactcagtttaattccctgcagccgggtgtgcaactaggccaacaatttcctgct
gcataccaatatcttcctgcccaaatgtcgacttctacgactgcaattcaaaatacacag
caacaattaactccgagtttacaaactgttcagcaaactaatacgcgacaagacttgcac
tcctctcgagtttcgactccacagcaatctttagcgatgcgctcgcatggagattggggt
ggaagtagtccgatgacttctgctggacaagagtggactaaccaaggacgaggcggaggt
tatcaaccgcagttttataaataa
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integrated database retrieval system
