Hydra vulgaris (swiftwater hydra): 100208059
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Entry
100208059 CDS
T01080
Name
(RefSeq) dynein intermediate chain 2, ciliary
KO
K10409
dynein axonemal intermediate chain 1
Organism
hmg
Hydra vulgaris (swiftwater hydra)
Pathway
hmg04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
hmg00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
100208059
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
hmg03037
]
100208059
04812 Cytoskeleton proteins [BR:
hmg04812
]
100208059
Cilium and associated proteins [BR:
hmg03037
]
Motile cilia and associated proteins
Dynein arm
100208059
Cytoskeleton proteins [BR:
hmg04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Dyneins
100208059
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WD40_CDC20-Fz
WD40
Beta-prop_RIG_2nd
Beta-prop_EML_2
Beta-prop_HPS5
EIF3I
Beta-prop_EIPR1
Beta-prop_WDR19_1st
WDR55
Beta-prop_TEP1_2nd
Beta-prop_WDR75_1st
WD40_RFWD3
Beta-prop_RSE1_2nd
Beta-prop_LRRK2
Beta-prop_TEP1_C
Motif
Other DBs
NCBI-GeneID:
100208059
NCBI-ProteinID:
XP_047139605
LinkDB
All DBs
Position
9:complement(28326282..28396551)
Genome browser
AA seq
677 aa
AA seq
DB search
MNLTKVTGKVINGFIEKKTVTSLSNIRSQEKNDATKIKRKKDEDDLTHIDELDEWLQPKQ
LMKPENQLVLTEAELKEEFTRILTANNPHAPDNIIRFNFKEKQYKPIANVEQIVFHFSME
GNLIHKDSEEAQKQSLSDDKHSIHEENDETHEDSIAVGNAFTKPSVQKVTNQFNFCERGS
QTFNNPSRERGTETEPPPRGNYSSNVNQWEIYDAYVEDLKRQEKEKEKEVKKSAKRESET
KKKNLTTEVTNDEVANVSKVAKIIERMVNQNTFDEIAYDFKYWEDASDEYRENEGTVLPL
WKFSYKGTKKMTVTALSWSPNYEDLFAVGYGSYDFLKQSTGIVCFYSLKNPTYPERIFMT
DWGVMCLDIHHSYSNLVAVGFYDGSIAVYNLESKEDKPILMTSTEFGKHTDPVWEVRWQT
DDLDGNLNLYSVSSDGRVVLWTIIKSELQNTEIIQLWVGSNFGDGFQESDKKVLGCGTCF
DFHKTVDHLFLVGTEEGKIQKCSKAYSSHYLSTFNAHQMAVYAVRWNYFHSKIFMSCSAD
WSVKIWDHTCCDAIFTYNLGSPVGDVAWAPFSATVFAAVTADGKVVIFDLNVNKYKPICE
QKIVQKGKTKLTHVSFNKVHPIVIIGDDRGCVTSVKLSPNLRKAIKERSKGPENEIAKFD
KLLSLAHDPFENVESNS
NT seq
2034 nt
NT seq
+upstream
nt +downstream
nt
atgaatcttacaaaggttactgggaaggttattaatggatttatagaaaagaaaactgtg
acttctctttctaacataagatctcaagaaaaaaatgatgcaacaaagataaaaagaaaa
aaggatgaggatgacttgacacacattgacgaattggatgaatggcttcagccaaaacag
ttaatgaaacctgaaaaccaacttgttttgactgaagctgagctaaaagaagagtttaca
aggatattaactgcaaataatcctcatgcacctgacaacataattcggtttaattttaag
gagaagcagtataaaccaatagcaaatgtcgaacaaatagtgttccatttctctatggaa
ggaaatctgatacacaaagattcagaggaggctcaaaagcaatctttatcagatgacaaa
cactcaatacatgaagagaatgatgaaacacatgaagatagtattgcagttggtaatgca
tttactaaaccctcagtgcaaaaagtcacaaatcagttcaatttctgtgaacgaggctct
caaacatttaataatccatccagggagcgtgggacagaaacagaaccacctccaagagga
aattatagcagcaatgtcaaccagtgggaaatttatgatgcctatgttgaagacttaaaa
agacaggaaaaagagaaagaaaaggaagttaaaaagtcagctaaaagagagagtgaaaca
aagaaaaaaaacttgacaacagaagtcacgaatgatgaagttgcaaatgtcagcaaagtt
gccaaaattattgaacgaatggttaatcaaaatacatttgatgaaattgcttatgatttt
aaatattgggaagatgcttctgatgaatatagagaaaatgaaggtacagtgctgccatta
tggaaattttcatataaaggaacaaagaaaatgactgtaacagctctctcatggtctcct
aattatgaagatttatttgcagttggttatggctcatatgattttttaaagcaaagtact
ggaatagtttgcttttacagtctaaaaaatccaacatatcctgaacggatttttatgaca
gattggggtgttatgtgtttggatattcatcattcctattcaaatttggtagctgttgga
ttttatgatggttcaattgctgtgtacaacttggaaagtaaagaagataaaccaattctt
atgacttcaacagagtttgggaaacatacagatcctgtatgggaggtgaggtggcaaaca
gatgatcttgatgggaacttaaatttgtattcagtatcctctgatggaagagttgtgttg
tggacaattattaaaagtgaactgcaaaacactgagatcattcaactatgggttggatca
aattttggtgatggatttcaagaatcagataaaaaagttctagggtgtggaacatgtttt
gatttccataaaacagtggatcacttgtttctagttggtacagaggaggggaaaatacaa
aaatgttcaaaagcttactccagccattatcttagcactttcaatgctcatcaaatggca
gtctatgctgtgcgttggaattattttcactcaaaaatctttatgtcatgcagtgctgat
tggtctgtaaaaatatgggatcatacttgttgtgatgctatttttacatataatttggga
agtcctgttggagatgtagcttgggcaccattttctgcaactgtatttgctgcagtaact
gctgacggaaaagtcgtcatttttgacttgaatgttaacaagtataaaccaatctgcgaa
cagaaaattgttcagaaagggaagactaaattgacccatgtttcttttaataaagttcac
ccaatagtaatcattggcgatgatagggggtgtgtgacttcagtgaagttatctccgaat
ctaagaaaagctattaaggagcgcagcaaaggtccagaaaatgaaattgcaaaattcgat
aaactgttgagtttagctcacgatccattcgaaaatgtagaaagcaattcataa
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