Hydra vulgaris (swiftwater hydra): 100208099
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Entry
100208099 CDS
T01080
Name
(RefSeq) vacuolar protein sorting-associated protein 53 homolog
KO
K20299
vacuolar protein sorting-associated protein 53
Organism
hmg
Hydra vulgaris (swiftwater hydra)
Brite
KEGG Orthology (KO) [BR:
hmg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hmg04131
]
100208099
Membrane trafficking [BR:
hmg04131
]
Protein recycling
Others
EARP complex
100208099
Endosome - Golgi transport
Tethering complex
GARP complex
100208099
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps53_N
VPS53_C
Vps54_N
COG5_N
Cauli_AT
COG4_N
ACDC
MCPsignal
DUF1664
DUF3496
Laminin_II
Motif
Other DBs
NCBI-GeneID:
100208099
NCBI-ProteinID:
XP_047142430
LinkDB
All DBs
Position
10:complement(13194189..13242778)
Genome browser
AA seq
777 aa
AA seq
DB search
MVESLKLTNDQLKGLVFSDEVEESLKEVINSTDPLDGKDFNPVEYINTLFPTEQSLANID
EVVARVRLRIRKLDNEIHASIRSQTDVANNGKQALEEAKEAIREVFSKIKDIKEKADKSE
EMVKEITRDIKQLDHGKKHLTTSITTLNHLHMLVGGVDTLMVLTKNRQYGEIANLLQGVL
NVLDHFKKYNNIPQIKQLSDRVRVIQESLGTQILADFRESLSDPDLKPPTGPSSLLADSC
KVVSILDPRIKEELLMWFVKLQLSDYLNVFNENFDIAWIDKIDRRYSWMKRVLIQFEENF
HGMFPADWGVDERICVEFCNITKNELGKIMDRRAVDIDVKLLLFAIQRTTAFEGFISKRF
TYSHLRAEKVSSDSYFSGSISKVFEVHLHIYIEAQDRNLHELMDKFHSDLKLHGVPPLGE
EAEGAILPSAGELFVFYKKCMVQCIQLSTGKALQSLTMTFKKYLLEYANKLLMANLPKVE
GSSLVSILKDTEVKFNEDEKRLICCALTTAEYCQETTVQLQEKLKEKVDKELVDNIDLNA
EQDAFHNVISCAIQLLVQDLENACEPALIAMTKIHWQSIESVGDQSSYVTAIISHLRKLI
PTIRDNLYSSRKYFTQFCIKFVNSFIPRYINNIYKCKPISTVGAEQLLLDTHSIKTVLLD
LPTLSSAIQRKPPASFTKVVNKGMTKAEMILKIVMSSHTTQVSFVESYIKLLADADTSNF
QKLLDMKGLKRSEQNALLDIFKTQMASNPNNNENLKETSVSDSSRIKRLEKLIKKQF
NT seq
2334 nt
NT seq
+upstream
nt +downstream
nt
atggtggaatctttaaagttaaccaatgaccaactaaaaggacttgtattttcagatgag
gtagaggaatctttaaaagaggtaataaatagcacagatcctttagatggaaaagatttt
aatcctgtcgaatatattaatacattgtttccaacagaacagtcattggcaaatatagat
gaagtagttgcacgagttcgtcttcgtattcgtaagcttgacaatgaaatacatgcatca
attagaagtcaaacagatgttgcaaataatgggaaacaggcattagaagaagcaaaagaa
gcaattcgagaagtattttcaaagattaaagatattaaggaaaaagcagataaatctgaa
gaaatggttaaagaaataacaagagacatcaaacagcttgaccatggtaaaaaacacttg
actacatctataactacactgaatcatttgcatatgttagttggtggagttgatacctta
atggttttaacaaaaaatcgacaatatggcgaaattgcaaatttactgcaaggggtctta
aatgttttagaccattttaagaagtataacaacatacctcaaataaagcagctctctgat
agagtcagagtgatccaagaaagtcttggaacacaaattttagcagacttcagagaaagt
ttatcagaccctgatttaaagcctcctactggaccaagttcgttgttagcagattcgtgt
aaagttgtcagtattcttgatccaagaattaaagaagagcttctaatgtggtttgtaaaa
cttcagctatctgattatttgaatgtattcaatgaaaattttgatatagcatggattgat
aaaattgatagacgttattcatggatgaaacgtgtattaatacagtttgaagagaatttt
catggaatgtttccagcagattggggtgttgatgaacgaatatgtgttgaattttgcaat
attacaaaaaatgagcttggtaagattatggatcgtcgtgctgttgacattgatgttaag
cttcttttatttgcaattcagcgtactacagcatttgaagggtttatctctaagagattt
acttacagtcatttaagagcagaaaaggtatctagtgattcatattttagtggttcaatt
agcaaggtatttgaagttcatttgcatatttacattgaagcacaagacagaaatcttcat
gaattaatggataaatttcattctgatctaaaattacatggagtaccaccattaggggaa
gaagctgaaggtgcaatactccctagtgctggtgaactttttgtgttttacaagaaatgt
atggtacagtgtattcaactaagtactggtaaggctctacaatcattgaccatgacattt
aaaaaatacttgctagaatatgcaaacaaacttctaatggcaaatttacccaaagttgaa
ggaagtagtcttgttagcattttaaaagatacagaagtaaaatttaatgaagacgaaaaa
agattaatttgttgtgcactaaccactgcagagtactgtcaagaaacaactgtacaattg
caagaaaagctgaaagaaaaagtagataaagagttagttgataacatagatttgaatgca
gaacaagatgcttttcacaatgttatatcttgtgctattcaacttcttgttcaggatctt
gaaaatgcttgtgaaccagctctaattgccatgacaaaaatacattggcaaagtattgaa
tctgtgggtgaccaaagtagttatgtaacagcaattatctcccatctgcgcaaattaatt
ccaactataagagacaatttgtattcatctagaaagtattttacacagttttgcattaag
tttgtgaattcttttattccgcgatacatcaacaacatttacaaatgcaaacctattagt
actgttggtgctgaacagctccttcttgacacccattctataaaaacagttcttttggat
ctgccaacactttcttctgctattcaacgaaagccacctgcaagttttacaaaagttgtt
aataaaggaatgacaaaagctgaaatgatcttaaagattgttatgtcttctcatactact
caagtcagttttgtggaaagttacataaagttgttagctgatgctgacacatcaaacttt
cagaaacttttagacatgaaaggtctgaaaaggagcgaacagaatgcgttactagatatt
tttaaaactcagatggcaagtaatccaaacaacaacgagaacttaaaggaaacctcagtg
agcgactcaagtcgaataaaacgtttagaaaaattaatcaaaaaacagttttaa
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