Hydra vulgaris (swiftwater hydra): 100208140
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Entry
100208140 CDS
T01080
Name
(RefSeq) nuclear valosin-containing protein-like
KO
K14571
ribosome biogenesis ATPase
Organism
hmg
Hydra vulgaris (swiftwater hydra)
Pathway
hmg03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
hmg00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
100208140
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
hmg03009
]
100208140
Ribosome biogenesis [BR:
hmg03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
100208140
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
RuvB_N
Nucleolin_bd
AAA_16
TIP49
AAA_14
AAA_5
AAA_2
AAA_28
AAA_22
nSTAND3
RNA_helicase
ABC_tran
AAA_33
AAA_3
AAA_17
AAA_18
Mg_chelatase
NPHP3_N
Viral_helicase1
NACHT
TsaE
IstB_IS21
Cytidylate_kin2
Zeta_toxin
Rad17
nSTAND_NTPase5
Parvo_NS1
AAA_lid_13
DUF1548
Motif
Other DBs
NCBI-GeneID:
100208140
NCBI-ProteinID:
XP_047133417
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All DBs
Position
5:47543837..47612263
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AA seq
924 aa
AA seq
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MQFDKMHKKKSYFVDRKFYPRLKEYFENGRNYSSDVDDIVDYLQTSFSEYSRKKRNALKH
SVQKALNDNLGMSKTDKSSFLEEKHLAKKLKMSRSDDHFSSYLDDQLSNDSESSIDESML
VEYKDSNYINSSMQNLYKTTVPPPLAQATTSTPTYNNKSASKLHTDKAQSNVETNDVEKV
KLLPKANGLPETRSLPQTNQLIDSSISVLSKKTLEPKEHVLISSNKIISLQSESDPSVLQ
KKSFESDQQDLPKKSLTSLLETNQLLKSNTPVNSVVKSTRKSAVKEKKFEAFTSNITFKD
IGGYESALEDVSKLLLHLKHPEVFLTLGIKPPRGFLLHGAPGCGKTLLANAIAGELQVPF
FKIAATEIVSGISGESEQKIRALFNEATAAAPSILFIDEIDSITPKRESAGKESERRVVT
QILTCMDELAHGDSHVLVIGATNRADSIDPALRRAGRFDREIAMGIPSKEARVCILKVIC
RDMRLEAGFDFEKIASLTPGFVGADMQALAREAAICAVESAFKSDNVVKALFSNEYLNNK
DVYINKKHSMWLQQQPPLSDAQLSNLFLTTHHFEQALPHVQPSAKREGFATVPDVSWKDI
GALEDIREELTMAIMAPVHNPVEFESLGLVTPPGILLAGPPGCGKTLLAKAIANEAGINF
ISVKGPELLNMYVGESEKAVRQVFQRAKNSAPCVIFFDEIDALCPRRSETGDSSASSRVV
NQLLTEMDGLETRKNVFIMGATNRPDILDAAILRPGRLDKLLYVGLPNPSDRKKILNTIT
MNGTKPKMADDVTIEVIASDQRCEGFSGADLSALVREASVTALKDFMKNSFKTSSTSVSN
PSTSVSNPSTDSEVLSDGYEEKKTSDVSDTFLSSHPINTSKTEETKKILVSRAHFETAFE
KVKPSVSGADRIWYDDMKKKNIRK
NT seq
2775 nt
NT seq
+upstream
nt +downstream
nt
atgcaattcgataagatgcataaaaaaaaatcatattttgttgataggaaattctatccg
agattaaaggagtattttgaaaatgggagaaattactcttcagatgttgatgacatagtt
gactatttacagacatcattttcagagtattcaagaaaaaagcgaaatgcacttaaacat
tctgtccaaaaagcattaaatgataatcttggaatgagcaagacagacaaatcttcattt
cttgaagaaaagcacttagcaaaaaagttaaaaatgtcaagaagtgatgatcatttttca
agctatttggatgaccagctaagtaatgatagtgagtctagtattgatgagagcatgtta
gttgaatataaggatagcaactacataaatagttctatgcagaatctttataaaacaact
gtgcccccacctttagcacaagcaactacatctacacccacttacaacaacaaaagcgct
tcaaaattgcatactgataaagcacaatccaacgtagaaactaatgatgttgaaaaagtg
aaattactacctaaagctaatggtcttccagaaacccgtagtctaccacaaactaaccaa
ttaatagattcttctatatctgttttatcaaaaaaaactttggagcctaaagaacatgtg
ctaatttctagtaacaaaataatttctttacagtctgaaagtgatccatcagttcttcaa
aagaaatcttttgagagtgatcaacaggatcttccaaaaaaatctttaacttcattactt
gaaactaaccaattgttaaagtctaatactcctgtaaactctgttgttaaatctacaagg
aagtctgcagtaaaagaaaaaaaatttgaggcatttacttcaaacattacttttaaagac
attggtgggtatgaatccgctttagaggatgttagtaaactactcctccaccttaaacac
ccagaagtgtttttaaccctaggaattaaaccaccaagaggattcttgttacatggtgca
ccaggttgcggtaaaacacttcttgcaaatgctatagcaggggaactgcaagtacctttc
tttaaaattgcagctactgaaattgtctctggaataagtggagaatcagaacaaaaaata
agagcattgtttaatgaagcaactgctgctgctccaagcatactctttattgatgaaatt
gactccatcacaccaaagcgtgaaagtgcaggaaaagaaagtgaaaggcgtgttgttaca
caaatattgacatgcatggacgaattagctcatggtgattctcatgtgttagtgataggt
gcaacaaatcgtgcagattctattgatcctgctttaagaagagctgggcgttttgatcgt
gaaattgcaatgggtatcccttcaaaagaagctagagtatgcattctcaaagttatttgt
cgtgacatgcggttggaggctggttttgattttgaaaagattgcaagtctcactcctgga
tttgttggagcagacatgcaagcccttgctagagaagctgcaatatgtgcagttgaaagt
gcattcaaatcagataatgttgtaaaagcattgttttcaaatgagtatttaaataataaa
gatgtttacatcaataaaaagcattcaatgtggcttcaacaacaacctcctttaagtgat
gcacagttatctaatctattcctcactacccatcattttgaacaagctttgccccatgta
caaccttcagcaaagcgtgaggggtttgcaactgtgcctgatgtttcttggaaagatatt
ggagcattagaagacatcagagaagaacttacaatggcaattatggcacccgttcataat
cctgtggaatttgaatcgctgggacttgttacccctcctggtatattattagctggtcct
cctggttgtggaaaaactcttctagctaaggctattgcaaatgaagctgggattaatttt
atttctgttaaaggtccagagcttctaaatatgtatgttggagagagtgaaaaagctgtt
cgccaggtttttcaacgtgcaaaaaactcagcaccgtgtgtaatattttttgatgagatt
gacgctctctgcccaagaaggtccgaaactggtgattcaagtgcaagttctcgtgttgtt
aatcaactgcttactgaaatggatggattggaaacaaggaaaaatgtatttattatggga
gctacaaaccgacctgatattcttgatgcagccatattacgtccaggtcgtctagataaa
ttgctatatgttggtctacctaatccaagtgatcgaaagaaaattttaaacacaataaca
atgaacggaacaaagccaaagatggctgatgatgttactattgaagtgattgcttcagat
caaaggtgtgaaggatttagtggagctgatttgagcgcacttgtacgcgaagcttccgtt
actgccttaaaagacttcatgaaaaatagttttaaaactagttctacatctgtctcaaat
ccatcaacatctgtctcaaatccatcaacagatagcgaggttttaagcgatggttacgaa
gagaaaaaaacgagcgatgttagcgatacctttttgtcgtcgcaccccatcaacacttcc
aaaactgaagaaacaaaaaagattcttgtatctcgagctcattttgaaacagcatttgaa
aaggttaaaccttcagtttcaggagcagatcgaatatggtatgacgatatgaaaaagaaa
aatataagaaagtaa
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