KEGG   Hydra vulgaris (swiftwater hydra): 100208145
Entry
100208145         CDS       T01080                                 
Name
(RefSeq) DNA repair protein XRCC1 isoform X1
  KO
K10803  DNA-repair protein XRCC1
Organism
hmg  Hydra vulgaris (swiftwater hydra)
Pathway
hmg03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:hmg00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    100208145
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:hmg03400]
    100208145
DNA repair and recombination proteins [BR:hmg03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Short Patch-BER factors
     100208145
SSDB
Motif
Pfam: XRCC1_N BRCT BRCT_2 PTCB-BRCT LIG3_BRCT RTT107_BRCT_5
Other DBs
NCBI-GeneID: 100208145
NCBI-ProteinID: XP_047130836
LinkDB
Position
4:37396835..37429028
AA seq 601 aa
MTLNIKHVVSFSSEDPSFPAENLLKSENYYKWKCASGTERQATVILQLEKVSKIHSIAIG
NCGSAFIEVLVGRSSWSANNEFQVLIAASTFMSPSESKSGKELTRVRIFGNESIIKSVGQ
EKWDQVKIVCTQPYCQTDGYGLSFIRIHPPPDTNIQLSDSTNNSKEIVMGNFRLKSSSDD
ENSLALTAGSFFQKRKISESQDQISPKVSMAVAARTGLSSQKPLVFASSSTDNSSKTINI
SANRRNEVAASLLNSSNTEKSKSIFPKMKNESSKRNVMDIESAKRKSIEESERNQPNKKN
KVDSNLELKTTEVPKKKKKKNVPFNEILKGVVFVLSGYENPQRGKIRDLGISMGAQYSAS
WNNSCTHLICAFRKTPKFNEVKGKGKIVGKGWFTDCQQKKRRTNTKNFRIDGGGNSSFES
SGDESFIENEAHMKDKKSSSENDTEDEIKRVRGLNKPSANEISSNSLKSTSAKTEDEDPY
GASTESESEEKKVAPKIESISDAVVPSLPDFFSGNCFFVYGDMDSKDRRYLKRCIIAYAG
TVEEYMKESVNYVITNSDWDENFKQALAENSSLKFVRPKWIFKCHEKQKFLPCDPYLVLP
L
NT seq 1806 nt   +upstreamnt  +downstreamnt
atgacattaaatataaagcatgtagtatcttttagcagtgaagatccgagctttccagct
gagaatttattaaaatcagagaattattacaagtggaaatgtgcaagtggaactgaaaga
caagctactgttatactccagcttgaaaaagtgagcaaaattcactctattgctattggt
aattgtggctctgcatttattgaggttttggttggacgatctagttggtcggcaaataat
gaatttcaagtattgattgcagcatcaacctttatgtcacctagtgagagcaaatctggc
aaagagttaaccagggtcagaatatttggcaatgaatcgattattaaatcagttggacag
gaaaagtgggaccaagttaaaattgtttgtacacagccttattgtcagacagatgggtat
ggtttatcatttataagaatacatccacctccagacacaaatattcagttgagtgattct
acaaacaactctaaggaaattgtcatgggaaattttagattaaaaagcagctctgatgat
gaaaatagtttggcattaactgctggtagtttttttcaaaagcgaaaaatttcagaatct
caagaccaaatctctccaaaagtttcgatggcagttgctgctcgtactggattaagttct
caaaagccattggtttttgcttcatcatcaacagataactcctccaaaactatcaatata
tctgctaatcgtagaaatgaggtcgctgcttctttgttaaattcatctaacacagaaaaa
agtaaaagcatatttccaaaaatgaaaaatgaatcttctaaaagaaatgtaatggatatt
gaaagtgctaaaagaaaatctattgaagaatctgagaggaatcagccaaacaagaaaaac
aaagttgatagcaatcttgaattgaaaacaacagaagttccaaagaaaaagaagaaaaaa
aatgttccatttaatgagattttgaaaggtgtagtgtttgtattaagtggctatgaaaat
ccacaacgtggcaaaattagagatttgggaatatctatgggtgcacagtattctgcatca
tggaacaattcatgcactcatttgatttgtgcttttcggaaaactccaaagttcaatgaa
gttaaaggaaaaggaaagattgttggcaaaggttggtttactgattgtcagcaaaagaag
aggcgaacaaatacaaaaaattttcgtattgatggaggaggcaatagcagctttgaatca
tctggagatgaatcatttatagaaaatgaagctcatatgaaagataaaaagagttctagt
gaaaatgatacagaagatgaaataaaaagagtacgcggtttaaataaaccttcggctaat
gagatctcaagcaattccttaaaatcaacctctgcaaaaactgaagatgaagatccgtat
ggtgcttcaacagaatcagaatcagaagagaaaaaagttgctcctaaaatagaaagtatt
tctgatgcagttgttcccagtttgccagattttttttctgggaactgtttctttgtttat
ggggatatggactctaaagacagacgttaccttaaaagatgtatcattgcttatgcagga
acggtagaagaatacatgaaggaatctgttaactacgttattacaaatagtgattgggat
gagaattttaagcaggctttggctgaaaattcatcattaaaattcgtccgtccaaaatgg
atttttaaatgtcacgaaaaacaaaagtttttaccctgtgatccttatttagtgttacca
ttataa

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