Hydra vulgaris (swiftwater hydra): 100208263
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Entry
100208263 CDS
T01080
Name
(RefSeq) serine/arginine-rich splicing factor 6
KO
K12893
serine/arginine-rich splicing factor 4/5/6
Organism
hmg
Hydra vulgaris (swiftwater hydra)
Pathway
hmg03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
hmg00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
100208263
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
hmg03041
]
100208263
Spliceosome [BR:
hmg03041
]
Common components
Common spliceosomal components
SR proteins
100208263
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_5
RRM_occluded
OB_RNB
SET_assoc
Toxin_32
tRNA_int_endo_N
Motif
Other DBs
NCBI-GeneID:
100208263
NCBI-ProteinID:
XP_002154006
UniProt:
A0A8B6XFM9
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All DBs
Position
10:complement(39470389..39483621)
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AA seq
259 aa
AA seq
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MPRLYVGRLNNRVIERDLKKFFDNYGKIRDIMMKNGYAFVDFDDYRDADDAVYDLNGKEL
MGDRVIIEHAKGIERGSGGAPYGRERFKDDRSGFGRKQRARDKYGPPVRTKWMLRVENLS
SRVSWQDLKDYCRPHAEVTYADAHRKERGVACICTSTYEDMKNLIRKIDNTELNGKKIRV
LDDRGSASRSRSRSRSRQKSRSVSRSRSRSRSRSKREKSRSKSRSKSKSRSRSPEPVKSG
ERSRSRSRSSPKRSRSRSR
NT seq
780 nt
NT seq
+upstream
nt +downstream
nt
atgcctcgtctatatgttggcagattaaataatcgtgttatagaaagagacttgaaaaag
ttttttgacaactatggaaagattcgtgatataatgatgaaaaatggctacgcttttgtt
gattttgatgactatcgcgatgctgatgatgctgtctatgatcttaatggaaaggagtta
atgggagacagagtgattattgaacatgcaaaaggcattgagcgtggatctggcggtgca
ccctatggaagagaacgatttaaagatgacagaagtggatttggccgaaaacaaagagct
cgtgataagtatggacctcctgttcgaacaaaatggatgttacgcgttgaaaatctgtca
tcaagagtcagttggcaggacttaaaagattattgtcggcctcatgctgaagtaacttat
gcagatgctcatcgaaaagaaagaggggtggcatgtatttgtacatcaacatacgaagat
atgaaaaatcttattcgaaagattgacaatacagaattaaatgggaaaaaaatcagagtt
cttgatgatagaggttcggcatctcgatctcgttctcgatctcgaagtaggcaaaaatct
agaagtgtgtcacgatcaaggagtcgttcaagatcgcgaagtaagagagaaaaatctcga
agtaaatcccgaagtaaatcaaaatcgcgttctagatctcctgaacccgtaaaatctggg
gaacgaagtcgctcgcgatctagaagcagcccaaaaaggtctcgttcacggtctcgttga
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