KEGG   Hydra vulgaris (swiftwater hydra): 100208454
Entry
100208454         CDS       T01080                                 
Name
(RefSeq) DNA-directed RNA polymerases I, II, and III subunit RPABC1-like
  KO
K03013  DNA-directed RNA polymerases I, II, and III subunit RPABC1
Organism
hmg  Hydra vulgaris (swiftwater hydra)
Pathway
hmg03020  RNA polymerase
hmg03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:hmg00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    100208454
  09124 Replication and repair
   03420 Nucleotide excision repair
    100208454
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:hmg03021]
    100208454
   03400 DNA repair and recombination proteins [BR:hmg03400]
    100208454
Transcription machinery [BR:hmg03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     100208454
  RNA polymerase III system
   RNA polymerase III
     100208454
  RNA polymerase I system
   RNA polymerase I
     100208454
DNA repair and recombination proteins [BR:hmg03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      100208454
SSDB
Motif
Pfam: RNA_pol_Rpb5_N RNA_pol_Rpb5_C DUF4422
Other DBs
NCBI-GeneID: 100208454
NCBI-ProteinID: XP_047128248
LinkDB
Position
3:complement(15378168..15437035)
AA seq 210 aa
MDDEAEVYKMWKIRKTVMQMCHDRRYLVTQDELDQTLEQFIEQFGDRPSEGHPSRGDISV
LVAHNDDPTDQMFVFFPEEEKVGIKTIKQYCTRMQEEGINRAIIVVQTGMTPSAKQALVD
MAPKYILEQFLEAELLINVTEHNLVPEHVVLSPEEKAELLTRYKLKDHQLPRIQQGDTIA
RYFGLKRGQVVKIIRPSVTAGRYVTYRIVQ
NT seq 633 nt   +upstreamnt  +downstreamnt
atggatgatgaagcagaagtttataaaatgtggaaaattcgaaaaactgtaatgcagatg
tgtcatgacagaagatacttagttacacaagatgagttggatcaaacattagagcaattt
atagaacagtttggtgatagaccaagtgaaggccatccgtcgcgtggagatatttcagtt
cttgtagctcataatgatgacccaacagatcaaatgtttgtattttttcccgaagaagaa
aaagttggaataaaaactatcaagcaatattgtactcgtatgcaagaggaaggtataaac
agagctatcatagtggtacagactggtatgacaccatctgcaaagcaggcacttgtggac
atggcaccaaaatatattcttgaacaatttttagaagctgagctgcttattaatgttact
gaacataatctggttcccgaacatgttgttttaagtcctgaagaaaaagcagagctactt
acaagatataagttgaaagatcaccagttacccagaattcaacagggtgatactattgca
aggtattttggattgaaaagaggccaggttgttaaaatcattcggccaagtgtaacagca
ggccgttacgttacttatcgcattgttcaatag

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