Hydra vulgaris (swiftwater hydra): 100208477
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Entry
100208477 CDS
T01080
Name
(RefSeq) DNA repair protein complementing XP-C cells homolog
KO
K10838
xeroderma pigmentosum group C-complementing protein
Organism
hmg
Hydra vulgaris (swiftwater hydra)
Pathway
hmg03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
hmg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
100208477
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hmg03400
]
100208477
DNA repair and recombination proteins [BR:
hmg03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
100208477
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BHD_3
Rad4
BHD_1
BHD_2
Shugoshin_C
FokI_D3
Motif
Other DBs
NCBI-GeneID:
100208477
NCBI-ProteinID:
XP_047122693
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Position
13:complement(35669343..35735508)
Genome browser
AA seq
1000 aa
AA seq
DB search
MRCIKKLFNFLFEIVISVKLKLLNMKRKTKETNVRAKQKNDLPEDSRRRSSRKIVNYAEN
NEEESSESDFEPVSKKIKATKIKTPRKNNTVAIKPVSEPSTNVQILNITNLHTALNLSED
ESSSDDDVPLSAIKSCILPKVNEANKPCILPKVNEANNFEAVNSAFFIEPKTEIKNEIKE
TLEDNKVLDDKKNSLITKKAGSLKNSKTKKSIPIESIESKKVQKTENNNTKVLRARKENK
VLKIETSKSSVEINKKKVSTSLKEISVNSSKANNMKFQSDTSSLADSEEENWEEVEEIEV
KSKSKKMKKEEIKEDNIKLNDLEISVGVSSIHKKKLTRQEKYHNWVRQLIGRFQRELQQH
IHKIHLLCLFACEIKRNMVCNIKSVQAICLSLVPLEFTKILTRQWNINHLRKFIDWYQKE
IPSTEELLLFTDKATQVLKHMQREYILVIMLRSLGFLSRIICSLQPCTHKVFSSKSAMES
NEKPTTANSKPPANSTKSPYFDSDTESSKLQKKSNLKSKNTNKKCNDASNNPNTVKKSAS
KKKKRKAKSSEDEEDEPKQIKSNKKSSAKSSVIKKGADVWIEVYLLTMQKWICIELTGKS
IDEPDKCELYATNPLQYVIGIDNYNKVKDLTCRYAAKWLSFNRKLRVDRDWWFKTLAPYK
PIESSIDSAEDAQLTKNLLDKDFPKTISDFKDNPLYALKRHLLKFQAIYPESAVPLGYIR
NEAIYSRDCIRELHTRETWMKQAKVVKPGEVPYKVVKGRPKRNTPVFERENVKVEVFGEW
QTEDYIPPPVVNGIVPKNAYGNVELFKPCMLPEGAVHLPMANMQKIARKLKVDHAPAMMG
WDFHGGFSHPVYEGIVVAKEHEDLLLDAWRREEELLEKKEKEKREKVIYENWRTLIKGLL
IQNKLKLKYKFEDDESAVKKQVNVKKQQTKSSKSKKSEATTNDDYTDLSVSWPMNRMTGI
SSLQDEGHTHVFKECSNSLNKGVKTCSCGLAISSDKVEDL
NT seq
3003 nt
NT seq
+upstream
nt +downstream
nt
atgagatgtattaaaaaactttttaattttttatttgaaatagttattagcgttaaatta
aagttattgaatatgaaaagaaaaacaaaagaaacaaatgttagagccaagcaaaaaaat
gatttaccagaagattcaagaagaagatcatcaagaaaaattgtgaattatgcagaaaac
aatgaagaagaaagttctgaatctgattttgagccagtaagtaaaaaaataaaggctact
aaaataaaaactccacgaaagaataacacagtggctataaaacctgtttcggaaccatca
actaatgttcaaattttaaatataactaacttacatactgctctaaacctttcagaagat
gaaagttcttcagatgatgatgtcccactctcagcaatcaaatcttgtatcctcccaaaa
gtgaatgaggcaaataaaccttgtatcctcccaaaagtgaatgaggcaaataattttgaa
gctgtgaatagcgcattctttatcgaaccaaaaacagaaattaaaaatgaaataaaagaa
actcttgaagataataaagttttagatgataaaaaaaattctttgatcactaaaaaagca
ggcagtttaaaaaacagcaaaacaaaaaaatctatacctatagagtcaatagaatcaaaa
aaagttcaaaaaacagaaaacaacaacaccaaagtattaagagctcgtaaagaaaataaa
gttttaaaaatagaaactagtaagtcatcggttgaaataaataaaaagaaagtaagcact
agcttgaaagaaatctctgtgaacagctcaaaagcgaataatatgaagttccagagcgat
acatcaagcttagctgatagtgaagaagaaaattgggaagaagtagaggaaattgaagta
aagtccaaatcaaagaaaatgaaaaaggaagaaataaaagaagataacataaagttaaat
gatctcgagataagcgtaggagtctcttctatccataaaaagaagttaacaagacaagag
aaatatcataactgggtgagacagttaattggtcgctttcaacgagagttgcagcaacat
attcataaaattcatctattatgtttgtttgcttgtgaaataaaaagaaacatggtttgc
aatattaaatctgtgcaagccatttgtttgtcattggttcctttggaatttacaaaaatt
ttaacacgacaatggaacatcaatcacttgcggaagttcatagactggtatcagaaagaa
ataccttctactgaagaactgttactttttactgacaaggcaacacaagtattaaaacac
atgcaaagagaatatattcttgtaatcatgttgcgatctcttggatttttgtcccgaata
atttgttctttacaaccttgcactcataaagtattttcatcaaagtcagcaatggaatct
aatgaaaaacctacaactgctaattccaaacctcctgctaattccactaaatctccttac
tttgactcagacacagaatcatcaaaattgcaaaagaaatcaaatttaaaatcaaaaaat
acaaacaaaaaatgtaatgatgcgtctaataatccaaacaccgtaaaaaaaagtgcaagc
aaaaaaaagaaaagaaaagcaaaaagttcagaagacgaagaggatgaacctaaacaaatc
aaatcaaacaaaaaatccagtgcaaaatcatctgttattaaaaaaggtgcagatgtttgg
attgaggtttatcttttaaccatgcaaaagtggatttgtatagagctaactggaaaatca
attgatgaaccagataaatgcgaattatatgctacaaaccctcttcagtatgttattggc
attgataactataacaaagtaaaggacttaacttgtcgttatgctgctaaatggcttagt
tttaaccgaaaactgcgtgttgatcgtgactggtggtttaaaactcttgcaccatacaag
cccatagagtcttcaattgattctgcagaagatgctcaactgacaaagaatcttcttgac
aaagatttccctaaaacaatcagcgattttaaagataatccactgtatgctttaaaacga
cacctattgaaatttcaagcaatttatcctgaatcagctgttcctttaggatacatccgt
aacgaagcaatatattcacgagactgtatcagagagcttcacactcgagaaacttggatg
aaacaagcaaaagttgtgaaacctggtgaggttccttataaggttgttaaaggaagacca
aaaaggaacactccggtgtttgaaagagaaaatgtcaaagttgaagtatttggcgagtgg
caaacagaagattacattcctcctcctgtcgtcaatggaattgttccaaaaaatgcatat
ggaaatgttgaactttttaaaccttgtatgctgccagaaggtgctgttcacttgccaatg
gccaacatgcagaagatagcaagaaagctgaaagttgatcatgctccagcaatgatgggt
tgggattttcatggtggcttttcacaccctgtttatgaaggaattgtggttgcaaaagaa
cacgaagacctgctattagatgcttggagaagagaagaagagttattggaaaaaaaagaa
aaagagaaacgtgagaaagttatttatgaaaactggagaacattgatcaaaggacttctc
atacaaaataaactcaagttaaaatacaaatttgaagacgatgagtctgctgttaagaaa
caagtcaatgttaagaagcaacaaaccaaaagttcaaagagtaaaaaaagtgaagctact
actaatgatgattatacagacctatctgtttcatggccaatgaacaggatgacggggata
agttctttacaagatgaaggacatacccatgtatttaaagagtgttcaaatagtttaaat
aaaggtgtaaaaacatgttcatgcggattggcaatatcaagcgataaggttgaagatctc
taa
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