Hydra vulgaris (swiftwater hydra): 100208604
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Entry
100208604 CDS
T01080
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 5
KO
K11836
ubiquitin carboxyl-terminal hydrolase 5/13 [EC:
3.4.19.12
]
Organism
hmg
Hydra vulgaris (swiftwater hydra)
Brite
KEGG Orthology (KO) [BR:
hmg00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
hmg01002
]
100208604
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
hmg04121
]
100208604
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
hmg04147
]
100208604
Enzymes [BR:
hmg01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
100208604
Peptidases and inhibitors [BR:
hmg01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
100208604
Ubiquitin system [BR:
hmg04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
100208604
Exosome [BR:
hmg04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
100208604
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UBA_7
zf-UBP_var
zf-UBP
UBA
UCH_1
UBA_9
EF-Ts_N
UBA_3
Motif
Other DBs
NCBI-GeneID:
100208604
NCBI-ProteinID:
XP_047138707
LinkDB
All DBs
Position
8:34995428..35045026
Genome browser
AA seq
806 aa
AA seq
DB search
MADNSANKIISLYSFTIPSSGDKIYKEECVYCFDSAISDGGLYVCLSTLWSTCRRHLHIH
VRKKEKTVFLHLKKIEVIKDNESCSPEKKPTKLAIGVEGGFDVNQDKTEYEDVNCLVLTD
LNGVEVKRWSLPDITLPINAQLSITAVLTLQGATVQDTIQAWQEKRNVSRHAMDLKQLNN
GVKVFPRGWKCAHCNLTTNLWLNLTDGTILCGRKYFDGSGGNNHAADYYKQTGYPLAVKL
GTITAEGGDVYSYDEDDMVEDPKLSQHLLHFGINIDQLKKTDKSMTELEIEANLSLKAEW
DAIQESGKKLVPLYGPGYTGMINLGNSCYMNSVMQVLFSFKEFQDAFALPSEQIFETSQA
IPPLDLNIQLAKLGAGLLSGIYSQPQYENQDQLGVRPQMLKSLIGQGHAEFSTNHQQDAH
EFFLHLLNKVEDNLSTPLHKLFSFQFEERLQCMQSNKVSYSRRTDMVLSLPVPLHAATNK
DEFKKFDEKYKEAKQKKLYTEPNSIVRLKVPMSACLEAFIADDIIEGYYSSAVKANTVAK
KKIRFATFPQYLVVQLKKFTAGDDWMPQKLDVMVDVPDELDLNHLRGNGLQPGEELLPSE
ELSAPGPTANEEYVSQLMNMGFSFEVCKKAVILSNNQGIEAAMNWIFEHSEDPDFESPIV
QPSFSQPSSLDPSAIDLIVSMGFGKELAILALQKNQNNIEAATNWIFSQQDEFFPTQDCD
PTLPIEKANESEKDISDATDGNLNDGKYRLIAFISHMGTSTSCGHYVCHIYKDNRWVIYN
DRKVAISEKPPKELGYIYFYKQITNV
NT seq
2421 nt
NT seq
+upstream
nt +downstream
nt
atggcggacaattctgcaaataaaataatatcattatatagttttactattcccagttct
ggtgataaaatctataaagaagagtgtgtatattgctttgattctgcgatatcagatgga
ggtttatatgtttgtttatcaacactttggtctacttgtagaagacaccttcatatacat
gttcgaaagaaagaaaaaactgtatttcttcatttaaagaaaatagaggttatcaaagat
aatgaaagttgttctcctgaaaagaaaccaacaaagcttgcaataggtgtagagggtgga
tttgatgtaaaccaagacaagacagaatatgaagatgtcaactgtctggtgctaactgac
ttgaatggagtagaagttaagcgatggagtcttccagacataactttaccaatcaatgct
cagctttcaattacagcagtattgacattacaaggagctactgttcaagatacaatacaa
gcttggcaagagaaacgtaatgtttctaggcatgctatggatttaaaacaacttaacaat
ggtgtgaaggtttttccaagaggatggaagtgtgcccattgtaacttgacaactaatttg
tggctaaatttgacagatggaactattttatgtggaagaaaatattttgatggatcgggt
ggtaacaatcatgcagcagactattacaaacaaacaggctatccattagcagtcaaactt
ggaacaataacagcagaaggtggggatgtatattcatatgacgaggatgatatggtggaa
gatccaaaattatctcagcacctactccattttggaataaatattgaccagttaaaaaag
acagataaatcaatgacagagttagaaattgaagcaaacttgtctttaaaagcagaatgg
gatgcaatacaagaatctggaaaaaagctagtcccactatatggacctggctacactgga
atgattaatttagggaacagctgctatatgaattcggtgatgcaagtattgttttcattt
aaagaattccaagatgcatttgctttgccgtcagagcagatttttgaaacttctcaagct
atacctccattagatttaaatattcaacttgctaaacttggagcaggtttattgagtggt
atttattcacagccccagtacgaaaatcaggatcagttgggtgtgcgtcctcaaatgtta
aaatcattgataggacaaggacatgctgaattttcaacaaaccatcaacaagatgctcat
gaattttttttgcatttacttaataaagttgaagataatctgtcgacaccattacataaa
ttatttagtttccaatttgaagaaagactacagtgcatgcagagtaacaaggtgtcttat
tcaagacgaactgatatggtcttaagtctacctgttcctcttcatgcagctacaaataaa
gatgagtttaaaaaatttgacgaaaaatacaaagaagcaaaacagaaaaaactctatact
gagcctaattctattgtcagactaaaagtgccgatgtctgcctgcttagaagcatttata
gctgatgatataattgaaggatattatagttctgctgtgaaagccaacactgttgctaaa
aaaaagataaggtttgcaacatttccacaatatctagttgtgcaacttaaaaagtttaca
gcaggcgatgattggatgccgcaaaaacttgatgtgatggttgatgttcctgacgagctt
gatctaaatcatcttagaggtaatggtttgcaacctggtgaagaattgcttccatcagaa
gagttatctgccccagggccaactgctaatgaagagtatgttagtcaattaatgaatatg
ggtttttcatttgaggtttgcaagaaagctgttatattatctaataatcaaggtattgaa
gcagccatgaattggatttttgagcattctgaagatcctgattttgaatcacctattgtt
cagccatctttctcacaaccctcctctctggatccttctgctattgatttaattgtttca
atgggttttggaaaagaacttgctatattggcattacaaaaaaatcaaaataacatcgaa
gctgcaacaaattggatattttctcaacaagatgagtttttcccaactcaagattgtgat
ccaactctaccgattgaaaaagctaatgaaagtgaaaaagatatcagtgatgctactgac
ggaaacttgaatgacggaaaatacagattaatcgcatttattagccacatgggaacatca
acctcttgcggtcattatgtttgtcatatttataaagataacagatgggtgatttacaat
gatagaaaagttgcaatttcagaaaaacctccaaaggagctaggatatatatatttttac
aaacaaataacaaatgtatag
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