Hydra vulgaris (swiftwater hydra): 100208622 Help Entry 100208622         CDS       T01080                                  Name (RefSeq) THO complex subunit 2 isoform X1   KO K12879   THO complex subunit 2 Organism hmg  Hydra vulgaris (swiftwater hydra) Pathway hmg03013   Nucleocytoplasmic transport hmg03040   Spliceosome Brite KEGG Orthology (KO) [BR:hmg00001]  09120 Genetic Information Processing   09121 Transcription    03040 Spliceosome     100208622   09122 Translation    03013 Nucleocytoplasmic transport     100208622  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:hmg03019]     100208622    03041 Spliceosome [BR:hmg03041]     100208622 Messenger RNA biogenesis [BR:hmg03019]  Eukaryotic type   mRNA surveillance and transport factors    Transport factors     TREX complex      100208622 Spliceosome [BR:hmg03041]  Complex C   Other components    EJC/TREX     100208622  Other splicing related proteins   Spliceosome associated proteins (SAPs)    TREX complex     100208622 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Tho2 THOC2_N Thoc2 TPR_19 Motif Other DBs NCBI-GeneID:  100208622 NCBI-ProteinID:  XP_047126502 LinkDB All DBs Position 2:complement(56907169..56994533) Genome browser AA seq 1429 aa AA seqDB search MATVMVPDKVLKNWNEIGRKDLLSLCSTPPKKMSSLISKKDLRKGFHQLIWLTISGQSII SDTISLLENAIGDSIELASLFADILAVADTETVCIEDKSCREQFLSLLSAVITVVPDGVL KERLDPETLESAGFIQSQKVFNQKLVRTKTKLFYKQQKYNLLREESEGYAKLITELSQDV SLSNQASMLENIKSLLGFFNLDPNRVLDILLEAFECQVDEDLFFIPLLTSYLSHCDISGF CHLIGFKFQYYHQSVDSITPQSLYKLAASLLRNNLLEMSDIYPHLHPTDSEIHSLSEKIT AKAKEDAKKMNAIILSENVDSEDKSDKNDDDLILKDNQKFGLCQALLEIGAWNQALKIIN QLPNSLLMSKCKIASSLCHLIHCTIEPLYRSKFSPKGAVGNVYRTKRGFPQPCLQYSQLC DYVFPMLFTIGVQLSIDPILVVKIIRVAKGFMKEYNQLTEALKEKQKCVMGGILTLIDEV LFPVISVLDCNCAVAEELWGLIKRLPYQLRYRLYALWKNQTYSVHPKLILAKAKIIKRAK YITKRLSKENVKPSGRQIGKLSHSNPGVLFDHLLDQIQRYDNFIGPMVDALKYLNPLAYD VLAFCIIEALANPDKQRMKQSDTNLSYWMQSLSQFCGAVFKKYPTEITGLLQYIANQLKD ENSLDLLVLKEVVQKMSGVEANDEITPQQLDALSGGELMKSEGAYFSQIRNTRKPSLRLR DALMEGKLTIPLCILIAQQRNAVVYVEEQQRHLKLIGKLYDQCQDNLIQFGGFLTIQLST HDYQASLPSLDEFHETYGLTPDVSFFLTRPVYKFEIQEKMEILKQSISQRNDLTSQKLKQ QELEKSFCETCDNIFRPVVASALPLQTNKIWGNLSPLLYVTFWSMTMYDLNAPKSRYDDE ISKLETAITEVDASKEITSSSKRRKEKERCQLLIDKLKEEFQTQLEHNKLIRIWLESKKD AWFPSKMTKGEMITQFLQLCIFPRCVFSAIDALYCAKFIQTIHTLQAPNFSTLICFDRTF SDVSYIVASLTENEASRYGRFLCAMLEMVSRWHQNKQLYEEECANVPGFLTVLRLTNNEK ASYLDYENFRHVCYKWQYKLTKALILGIESQDFTQIRNTLLVLIKILPYYPQVQNLGQAL ERRIEKVIEEEKENRQDLQALAIGYKGMLKTKKEKMVPENKFHAENEKNSVNKNKPAVKA NLKQDVSDDRTSKGLKREELPKLSATEKRTSSRTDTTSDSTGKSEREKIVIEENSYERKK ASSHSPHNNSSSTEKVVEVSNSKENGERSKESDRIKEKDDWSKEKRSRTDSPTSDDLKKR KRISDDSHNASIKRDKSNEKRNDNKRQSSEPDLSDSKKRKDETSVSESSDQRIKKTEGLK RDKSKKDYEKDDSKQLRKEPRPLDSKRSTKSDQRSTQHKDHKKSRDREK NT seq 4290 nt NT seq  +upstreamnt  +downstreamnt atggcgacagttatggttcccgataaagtactgaaaaactggaacgaaataggacgcaaa gacttattgagtttatgtagcactccaccaaagaagatgagttcacttatttcaaaaaaa gatcttcgtaaaggctttcatcagttaatatggctaaccataagcggccagtcaataatt tcagatacaatatcactgctagaaaatgctataggggatagtatagaactagcatcactt tttgctgatattcttgcagttgctgacacagaaacagtttgcattgaagataagtcatgc agagagcagttcttatctcttctttctgcagttatcacagtggttccagatggcgtttta aaagaaaggttagatccagaaacgttagagtcagctggttttattcagtcacagaaagtg ttcaatcaaaaacttgtgagaacaaagacaaagttattctacaaacagcaaaagtacaat cttttaagagaagagagtgaaggatatgctaagttaattacagaattaagtcaagacgta tcactttcaaaccaggcttcaatgcttgaaaatataaaatcattactgggatttttcaat ctggatccaaatcgtgtgcttgatattttattagaagcctttgaatgtcaggtagatgag gatttgtttttcataccgctattaacaagttacttatcacattgtgacatctctggtttt tgtcatcttattggttttaaatttcagtattaccatcaatcagttgatagcattactcca cagtcgttatacaaattggcagcatcattattgcgaaacaatcttttagaaatgagtgat atttaccctcatcttcatccaacagatagtgaaatacacagtttaagcgaaaaaattact gctaaggcaaaagaagatgcaaaaaaaatgaatgcaattattttatctgaaaatgttgat tcagaagataagtctgataaaaatgatgatgatctgattttaaaagacaaccaaaaattt gggctatgccaagctttattggaaataggagcatggaaccaagctttaaagatcataaac caacttccaaatagcttactaatgagtaaatgcaaaattgcaagttctttatgccatcta attcattgcactattgaacctttgtacagaagtaaatttagcccaaaaggtgccgttgga aatgtctatagaaccaaacgaggtttccctcagccatgtttacaatacagccagttgtgt gattatgtttttccaatgttatttactattggtgtccagttatctattgatccgatacta gttgtgaagattatcagagttgctaaaggatttatgaaagagtacaatcagttaactgaa gcgctgaaagaaaaacagaaatgtgttatgggaggcattttaactttgatagatgaagtt ctttttcctgtgatatctgtgcttgattgcaactgtgcagtagctgaggaattgtggggt cttatcaaaagattgccttatcagctaagatatcgactttatgcattatggaaaaaccag acatattctgttcatccaaagctcatactggctaaagcgaaaatcattaaacgagcaaaa tatattacaaagcgcttatctaaagaaaatgtgaagccatctggacgtcaaattggaaaa ttgagccatagcaaccctggagtactttttgaccatttgctagaccagattcaaaggtat gataactttattgggccaatggttgatgcacttaaatatcttaaccctcttgcatatgat gtgctagcattttgtattattgaagcattagcaaatcctgataaacaacgaatgaagcag tctgatactaatctttcttactggatgcaaagtttatcacaattttgtggtgctgtattt aaaaaatatcccacagaaattactggtttgcttcaatacattgctaaccaacttaaagat gagaatagtttagatttgctggtactaaaagaagttgttcaaaagatgtcaggtgttgaa gcaaatgatgaaataacacctcaacaacttgatgccctttctggtggggagcttatgaaa tcagagggtgcatatttcagtcaaattcgaaatactcgaaagccatctttgcgtttacgt gatgccttaatggaaggaaagttgactataccactttgtattctgattgcacaacaaagg aatgctgttgtttatgtagaagaacagcaacgtcaccttaaattaatcggaaaactatat gatcagtgtcaagacaatctgattcaatttggcggttttctcacaatccagttaagcact catgactaccaggctagcctgccatctttagatgagtttcatgaaacatatggtttaact ccagatgtttcatttttcttaacaagacctgtctataagtttgaaatacaggaaaagatg gagattttaaagcagtccataagtcaacgcaatgatttgacatctcagaaattaaagcaa caagaattagaaaaatctttttgtgaaacatgtgacaacatatttcgacctgtggttgct tctgctttgccattacaaacaaataaaatttggggaaatttaagccctttactgtatgtt actttttggtcaatgacaatgtacgatttaaatgcaccaaaaagtcgctatgatgatgaa atcagcaaattagaaacagctataacagaagtagatgctagcaaagaaataacttcaagt tctaaaagacgaaaagaaaaagagcgatgtcagcttttaatcgacaaattaaaggaagag tttcaaactcaacttgagcacaacaaacttattagaatatggctcgagtcaaagaaagat gcatggtttccttcaaagatgacaaagggagaaatgatcactcaatttttacaactctgc atttttccaagatgtgttttttctgctattgacgctttatactgtgccaaatttatacaa actattcatacgttgcaagcaccaaacttttctactctcatatgttttgataggacattt tcagatgtttcgtatattgttgcaagtctgacagaaaatgaagcaagccgttatggtcga tttctatgtgcaatgttagaaatggtatctcgatggcatcaaaataagcaactttatgaa gaggagtgtgctaatgtcccaggatttttgacagtacttcggttaacaaataatgagaaa gcctcctacttagattatgaaaattttcgtcatgtttgttacaaatggcagtataaactt actaaggctttaatattggggattgaatcacaagactttacacaaataagaaacacattg ttagttttgataaagatattgccatattaccctcaagttcagaatctggggcaggccctg gaaagaagaatcgagaaagtaattgaagaagaaaaagaaaaccgccaggatttgcaggct ctagctattggttataagggaatgctcaaaacaaaaaaagaaaaaatggttcctgaaaat aaatttcatgcagaaaatgaaaagaattcagttaacaaaaacaaacctgctgttaaggct aatctaaaacaagatgtatcagatgacaggacctcaaaaggtttaaaaagagaagaacta ccaaaactcagtgctacagaaaagagaaccagctctcgaacagacactacctctgattct actggtaaaagtgaaagagaaaaaattgttatcgaggaaaacagctatgaaagaaaaaaa gcatctagccactcaccccataataactcaagcagtacagaaaaagtagtcgaagtcagt aatagtaaagaaaatggtgagcgttctaaagaatctgacagaataaaagaaaaagatgat tggtcaaaagaaaaaagatcaagaactgattctccaactagtgatgacctaaagaagaga aaacgtatttcagatgattctcataatgcttcaataaagagagacaaatcaaatgagaag aggaatgacaacaaaagacaatcttctgaaccagatttatccgactctaagaaaagaaag gatgaaacttctgtatccgaatcgagtgatcaaagaataaaaaaaactgagggtttgaaa cgtgataaatctaaaaaagattacgaaaaagacgactcaaagcagcttcgcaaagaacct cgaccattagattccaaaagaagcacaaaatctgatcaaagatctacacaacacaaagat cataaaaaatctcgagatcgtgaaaaatga

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