Hydra vulgaris (swiftwater hydra): 100208929
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Entry
100208929 CDS
T01080
Name
(RefSeq) WD repeat-containing protein 75
KO
K14552
NET1-associated nuclear protein 1 (U3 small nucleolar RNA-associated protein 17)
Organism
hmg
Hydra vulgaris (swiftwater hydra)
Pathway
hmg03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
hmg00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
100208929
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
hmg03009
]
100208929
Ribosome biogenesis [BR:
hmg03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
100208929
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_WDR75_2nd
Beta-prop_WDR75_1st
WD40_Prp19
WD40
WD40_WDHD1_1st
WDR55
Beta-prop_EML
Beta-prop_EML_2
WD40_CDC20-Fz
EIF3I
Beta-prop_IFT140_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_2nd
WDR90_beta-prop_4th
Beta-prop_HPS5
Beta-prop_IP5PC_F
Beta-prop_Vps41
NBCH_WD40
Motif
Other DBs
NCBI-GeneID:
100208929
NCBI-ProteinID:
XP_047136448
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Position
7:21709800..21754436
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AA seq
820 aa
AA seq
DB search
MGDEKHNAARKDKNKKKLFAKKQCTASDVYPYKCNKYFVKIKPFITADSKHIVCSSGSKV
LIFRLKTGVLEKVFDEHKKNVIAIFPHEKNPLQVISCTEDEVVMWDCTDLTVYKKFILPC
KIFDVYMPTAKSGVTIYFVSTAKKEIKKNKTVLFRYNVLTQEMLHVSVISKGYRKFAVSK
CESFIAIIYRKYLKIYNCNKQSIVQYKYDAVSLTCVAIHPSSDVIATGDEDGRLILWNDI
CGEQKEPICSKLHWHNNYVNDVLFMNDGFYIVSGGSEGVLVIWQLENHKKNYLPRVGGSI
LHLFQSNDSQHLGFAIDSNVIKLLSVHDTKLTKAIKGFSIANDFPAGISYDSKTDCLVMN
GKPDGVIQFYNPQHDMVKINLDVVGENLITSVEDRHIYPSRIERIALSQDSSWLATIVIR
KDVLLPTERTLKLWKYYNNKFYLNSVVEPVHSDDVYVLLFRPHKSNYYVITSSKDGNIKC
WQLAEGKNSQGKQIQAWELHSIGTYGKQSCHQACFSDDGSLLAALFSEITIWDPDNLSLE
STISWNCELDPIKSLMFCHKESNKYLIGCSDNTIVSWNVSTLEIAWKMQCEVKLITSDPS
SKYFAAFIWFKRNNKMHLYLFDPCVPTPAGLICNIQQDFSSLKSAIFTPRLEHTVGNTIW
TKIGVLYYLKDNSIMRIVEADEIKTNNKESNIPIENSAFTEIFGAAQKQNVNDSSNTSIP
TGNTASMIIQKILSTPSHVLPSTDMLCKVFLKSFLISKSSHAELKDTNNDIDDDKDDICE
QDRINSEVVVISPALEDLIPIDHIKLPSYDFAFIKEMAET
NT seq
2463 nt
NT seq
+upstream
nt +downstream
nt
atgggggatgaaaagcacaatgctgctcgaaaagacaaaaacaaaaaaaaattatttgct
aaaaaacagtgtaccgcttctgatgtttatccttataagtgtaacaaatattttgtgaaa
atcaagccctttataacagcagattcaaagcatatagtatgtagcagtggcagcaaagtg
ttgatatttcgcctaaaaactggtgttttggaaaaggtttttgacgaacacaaaaaaaat
gttattgcaatatttccccatgaaaaaaatcctttgcaagtaatatcttgtactgaggat
gaggttgttatgtgggattgcactgatttaactgtatacaagaagttcatccttccctgt
aaaatctttgatgtatacatgccaacagcaaaaagtggagtgacgatttattttgtttca
accgctaaaaaagaaataaaaaaaaataaaactgttttatttcgatataatgtgttaact
caagaaatgttgcacgtatctgttattagcaaaggttatagaaagtttgcagttagtaaa
tgtgagagttttatagcaataatatacagaaaatatttgaaaatatacaactgcaataaa
caaagtattgtccagtataaatatgatgctgttagtttaacatgtgtggccatacatccc
tcatcagacgtaattgcaacgggagatgaagatggaagattaatcttatggaatgatata
tgtggagagcagaaagaaccgatttgctctaaactccactggcataataattatgtaaat
gatgtgctttttatgaatgatggtttttatatagtatctggtggaagtgaaggtgtgtta
gttatatggcagcttgaaaaccataaaaaaaactatttacctcgagttggtggatcaata
ctacacttatttcaatctaatgattcacaacatcttggttttgctatcgatagtaatgtt
attaaactgttatcagttcacgataccaagttaacaaaagctataaaaggattctctatt
gctaatgattttcctgccggaatatcttatgactctaaaacagattgtcttgttatgaat
gggaaacctgatggagttattcaattttataatccacaacatgatatggttaaaattaat
ctagatgttgttggtgaaaacctgataacatctgttgaggatcgtcatatataccctagt
cgcattgaacgaatagcattatcgcaagacagttcatggttagcaactatagtaattcga
aaggatgtacttttacctactgaaagaacattaaagttatggaaatattataataataaa
ttttacttaaattctgttgttgagcctgttcattctgatgatgtgtatgtactactattt
cgtccacataaatcgaactactatgtcattacttcgagtaaagatggaaatatcaaatgt
tggcagttagctgagggaaagaatagtcaaggcaagcagatacaagcgtgggagttacac
tctataggaacttatggtaaacaaagttgtcaccaagcttgtttttctgatgatggatca
ttgttagctgcacttttttctgaaataacaatatgggaccctgacaacctttcattggaa
agcacaattagttggaattgtgaattagatcctatcaagtcccttatgttttgtcacaag
gaatctaataaatatcttattggatgctctgacaacactattgtgtcttggaatgtttct
acattagaaattgcttggaaaatgcagtgtgaagtaaagttgataacatctgatccatct
tctaaatattttgctgcatttatttggtttaaaagaaataataaaatgcatttgtatctc
tttgatccttgtgtaccaacacctgctggactcatatgtaatatacaacaagacttctca
tctctcaagtctgcgattttcaccccacgtttggaacacactgttggaaatactatttgg
actaaaattggagtcttatactatctcaaagacaatagtatcatgagaatagtcgaagca
gatgaaatcaaaacaaataataaagaatctaatattccgattgaaaattcagcttttaca
gaaatttttggagctgcacaaaaacaaaatgtgaatgatagcagtaatacatctattcct
actggtaacacagcttcaatgattatacaaaagatactatcaacaccatctcacgtttta
ccatctacagatatgttgtgcaaagtctttttgaagtcttttctcatctctaaatcgagc
catgctgagctaaaagatacaaacaatgatatcgacgatgataaagatgatatttgtgaa
caagatcgcataaattcggaagtagtcgtaatttccccagccctcgaagatcttattccg
attgatcatattaaattaccttcgtatgactttgcatttataaaggagatggcagaaact
tga
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