Hydra vulgaris (swiftwater hydra): 100209000
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Entry
100209000 CDS
T01080
Name
(RefSeq) tRNA:m(4)X modification enzyme TRM13 homolog isoform X1
KO
K15446
tRNA:m4X modification enzyme [EC:
2.1.1.225
]
Organism
hmg
Hydra vulgaris (swiftwater hydra)
Brite
KEGG Orthology (KO) [BR:
hmg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hmg03016
]
100209000
Enzymes [BR:
hmg01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.225 tRNA:m4X modification enzyme
100209000
Transfer RNA biogenesis [BR:
hmg03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
100209000
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRM13
zf-TRM13_CCCH
zf-U11-48K
Methyltransf_32
zf-SAP30
GCD14
FtsJ
Methyltransf_28
Motif
Other DBs
NCBI-GeneID:
100209000
NCBI-ProteinID:
XP_047139770
LinkDB
All DBs
Position
9:complement(24182113..24240335)
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AA seq
457 aa
AA seq
DB search
MDTSTFKIFSCNNIKPPVEGRCGYFVKRKQRFCKMMPPKGQTYCAEHLFQENSQNDAKRK
RILCPLDKKHSIYEDNIDKHLKKCNAAIKIQLPYFEKDINIGLKNYSYNQQEQLNLSEIP
VEILVGLIERVKKCFLDISNQPIKESFSLHPIFNDELSIASYGATVKKHLLQQASLIKIL
EDMDCLNNGTSVIEFGAGKGSFSHWVQKTMSNKNDVSFYLVDRQSNRNKFDCYHKGELQG
PRFQRLNIDIQHLNLEKVESLCNSSQSIVGIGKHVCGAATDLTLKCLFDSSSNISENDEP
PKKRKTNLKSRVHSCLFALCCYHCCTWPTYVGRDFFIRIGFTAYDFNIISKMVGWATCGF
SRRKIKNESEGVDGVENGVDGVENGVDEHSLKKTYKEEDIKLKLTSEEQEEIGRVCKRMI
DFGRIEYVNFHGYNAELVHYISNSITPENIALKITKH
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
atggatacatctacattcaaaattttctcttgcaataatattaaaccacctgtagaagga
agatgtggatactttgtcaaaaggaaacaacgcttttgtaaaatgatgcctcccaagggt
caaacgtattgcgcagaacatttgtttcaagaaaatagtcaaaacgatgctaaaagaaaa
agaattttgtgtcctttggataaaaaacattcgatttatgaggataatattgacaaacac
cttaaaaaatgcaatgcagcaatcaaaatacagttgccatattttgaaaaagacataaat
attggattgaaaaattacagctataatcaacaggagcagttaaatcttagtgaaatacct
gttgagatacttgttggtcttattgaaagagtcaaaaagtgcttcttagatattagtaac
caacctatcaaagaaagtttcagcttgcatcctatttttaatgatgaacttagtattgca
tcatatggtgctactgttaaaaagcatcttctgcaacaggcatctttgataaaaatttta
gaagatatggattgcttaaataatggaacatctgttattgaatttggagctggaaaaggt
tctttttcacactgggtacaaaaaacaatgagtaacaaaaatgatgtgagtttttatctt
gtagacagacaaagcaacagaaacaagtttgactgttaccataaaggtgaactacaagga
ccaaggtttcagcgcttaaacatcgatattcaacatttgaatttggaaaaagtggaatca
ctatgtaactcatcacaaagtattgttggaattggaaaacatgtttgtggagcagcaact
gatcttacacttaaatgtctttttgattcttcatctaacatatcagaaaatgacgagcct
ccaaaaaaaaggaaaacgaatttgaaatctcgagttcattcgtgtttatttgctctttgt
tgctatcactgttgcacgtggccaacttatgtaggaagagacttttttattcgtataggt
tttactgcatatgatttcaatataatctcaaaaatggtgggttgggctacttgtggattt
tccaggagaaaaataaaaaatgaatctgaaggtgttgatggtgttgaaaatggtgttgat
ggtgttgaaaatggtgttgatgaacatagtttaaaaaagacatataaagaagaagatatt
aaactcaagcttacttcagaggagcaagaagagatagggcgtgtatgcaaaaggatgatt
gattttggtcgcattgaatatgtcaattttcatggttacaatgctgaacttgttcattac
ataagcaatagtattacaccagaaaatattgctttaaaaataacaaaacactaa
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