Hydra vulgaris (swiftwater hydra): 100209593
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Entry
100209593 CDS
T01080
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1
KO
K11648
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1
Organism
hmg
Hydra vulgaris (swiftwater hydra)
Pathway
hmg03082
ATP-dependent chromatin remodeling
hmg03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
hmg00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
100209593
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
100209593
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
hmg01009
]
100209593
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hmg03021
]
100209593
03036 Chromosome and associated proteins [BR:
hmg03036
]
100209593
Protein phosphatases and associated proteins [BR:
hmg01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
100209593
Transcription machinery [BR:
hmg03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
100209593
SWI/SNF complex
100209593
Chromosome and associated proteins [BR:
hmg03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
100209593
PBAF complex
100209593
SWI/SNF complex
100209593
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF5
INI1_DNA-bd
TdIF1_2nd
Motif
Other DBs
NCBI-GeneID:
100209593
NCBI-ProteinID:
XP_002153941
UniProt:
T2ME83
LinkDB
All DBs
Position
10:complement(26979526..26981616)
Genome browser
AA seq
378 aa
AA seq
DB search
MPLQTFGEKPKSFQLNDNSDELFMIGSEVGSYLHMMRGSVYKRYPCLWKRLATSDERKKM
SKYAMHQLPAHVMIVKAAEVEELIEGKESKYKNEGGSTVAKDSPQLLPKPRQRGKPDIWV
PNILPNNSHHLDAVPAGTPISRHRVGSKRVKTFPTCYDDHDMAAIHDAANEVEELIPIRL
DIELDGQKLRDTFTWNKNEKLISPESFAEVLCDDLDLPTLVFVPAIVQAMHTQIRQYNAQ
PEILSEMSDQRVIIKLNLHVGNVSLQDQFEWDISEKLNNPEQFALSLCTELGLGGEFVTA
IAYSIRGQLNWNRKTYAFSENPLPVVENAVRTGMDIDKWCPYLETLTDAEMEKKLRDQDR
NTRRMRRLANTIPYSMQI
NT seq
1137 nt
NT seq
+upstream
nt +downstream
nt
atgccattacaaacctttggagaaaaaccaaagtcttttcaattaaatgacaatagtgat
gagttatttatgattggaagtgaagttggaagctacttgcatatgatgagaggctcagtt
tacaagcgttatccttgtttatggaaacggcttgcaacatctgatgagcgtaaaaaaatg
tcaaaatatgcaatgcatcaacttccagctcatgtcatgatagtaaaagctgctgaggtt
gaagaacttatagaaggaaaagaaagcaaatacaaaaatgaaggaggttcaactgttgca
aaagactctccacaattacttcctaaaccacgacagagaggaaaacctgatatttgggta
ccaaatattttaccaaataactcacatcatttagatgcggttcctgctggtactccaatc
agcagacatagggttggttctaaaagagtcaagacattcccaacttgttatgatgatcat
gacatggcagcaattcacgatgcagcgaatgaagttgaagagcttattcccatacgctta
gatattgagcttgatggacaaaaactgagagatacttttacttggaataaaaatgaaaaa
ctaatttcaccagaatcatttgcagaagtgttatgtgatgatttggatctacctacatta
gtatttgtaccagctattgtgcaagcaatgcatacacaaattcgacaatataatgcacag
ccagaaattttaagtgaaatgtcggatcaacgggttataattaagttaaatttgcatgtg
ggaaatgtttctctgcaagaccagtttgagtgggacatttctgaaaagcttaataatcca
gaacaatttgccttatctctttgcactgagttaggtcttggtggtgagtttgtgacagct
attgcttacagtatacgtggtcagttaaattggaacaggaaaacttatgcatttagcgaa
aatccactacctgtagttgaaaatgcagtacgcactggaatggatattgataagtggtgc
ccatatttagaaactcttacagatgctgagatggaaaagaaattaagagatcaagacaga
aatacaaggcggatgcgtcggcttgccaatacaataccttattctatgcaaatttaa
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