Hydra vulgaris (swiftwater hydra): 100209641
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Entry
100209641 CDS
T01080
Name
(RefSeq) AT-rich interactive domain-containing protein 1A
KO
K11653
AT-rich interactive domain-containing protein 1
Organism
hmg
Hydra vulgaris (swiftwater hydra)
Pathway
hmg03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
hmg00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
100209641
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hmg03000
]
100209641
03021 Transcription machinery [BR:
hmg03021
]
100209641
03036 Chromosome and associated proteins [BR:
hmg03036
]
100209641
Transcription factors [BR:
hmg03000
]
Eukaryotic type
Helix-turn-helix
ARID
100209641
Transcription machinery [BR:
hmg03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
100209641
Chromosome and associated proteins [BR:
hmg03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
100209641
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BAF250_C
ARID
FTR1
DnaJ
Motif
Other DBs
NCBI-GeneID:
100209641
NCBI-ProteinID:
XP_002157646
UniProt:
T2MJQ4
LinkDB
All DBs
Position
3:24804014..24817621
Genome browser
AA seq
1498 aa
AA seq
DB search
MNQHNMMQQFYEQQPQNNINGFPTGSAFHGNQQGTYNGSSSTSTPYRNQNGMPRYSQNEN
DSFESTQSNMSQSSVNYTAGNNYMDPRVIGFDPRNHSNYETQNGMVQGMELFSQNMYPGK
GRFNEMTGMINPGSAFQRQRMLGPGSDNDFISPTNPYGGGFSPQQMAQMIQHQRYDVYQR
QVHEQQVSAQQLAHSTRDTCQFPLSADTDQTNNNSDNDLKQSQNSLPNRKLTNSTRADIT
SNLVDSMQRTGSEGMQRTSSEGIPRTGSVNIDSDGHRNAAIIAASEVRAQAAASTSKGRV
PFPTPNSNTMNTFPFNIRNFHVNNDQMPSPFPHNLHSPDYSAIMSPNKDYTGVALSPLSQ
QGRRTPRSGIPPPPYSPLPHNNDSNHLGSVKGSNSNISSLLKGNLQKQLDIFTPVSYSNQ
EYNVDKPSSQGIGSSARLSGTPNNVLSCSPSAQSPFQDDFDFGMSPSWPSTPASPERSKR
LKSQASPRRFDQLSKIYEVITDEEKRNFLDRYLAFMSINGTPVTKVPVINEQPLDLYILF
RSVCERGGINAVLEKHQFKEILKALKLPVDNSLLAYSVKEQYMKYLHAYEIKAKNALLKQ
WKDTPFDRNVSQETPLATISLNESLHSTMNDMKSSVTMNANTHNNPTLPVSSWSSTSPVS
EIKTSNSSIISSSSLQYGPCPSYQNQPNPISYGTQNIPNYGSGQQDITINNAYPNNMPYS
GYPNPMFPHGPLPGYNSMLPGIPPENMQNSWPRVFSPHQGPPELFPEGLPRMPWSQQTQR
QPVHSFTNSNFTPGKPRSQAPLCRQDQLEQMKYHQQMKMPHYQHPTMQPKFSMPTKNTNK
IVQQNNISDVKSTNNPSNKRDFGFPPDSVEGAKPLLRKRKKMTSKDLGPIEAWRIMMSLK
SGLVAECSWAIDTLNILLSDNKTITYFHLTQLPGLLDTLMDHYRRCLSLMFKYFKSDEVP
LFPEINDEAVDTEKILNSLWVGVCKNAEQSYTANIASSAVMAEVDEYVVTSNETGSRLSS
TLTSHIQTNFPSNNLKTNRFPQGLPYESEADIEKRKRLERVTSPRFSIEKTTPDHEKNSL
KTNCDKNNVISDVSTEQVNSACLDILKDLINAYESKETSSPDLLVEKVIKDLEFDLPCDK
KYLEDSREFISYLNRRFQRENRGNVENEHCVLKQFSPFLELQESELSLLHRCVAMSNIFR
SLSFIQGNDSELANNVGLLIIAGHLLTYQHEHTITDHSKFKMGLDKRDLDNSSISTSENE
VWLESLANMRENTMVLLSNISGHLNLSIYPEEIHKPIITGLVHWLVCKSSEALDPLPTAP
GPHALSPQCLSIETLAKITINLNNIELIARCSNQLVLENMAGALIEQFSKKHLVPVREFS
LILLDNLARCEDFCKVLALRRSCVSSIVKFICDAERNTSNYLSSGGRVQPGLNAEDICGT
SISLLRRSVNILLSLSKLPYNKHRLLPFTDDILALSTSQMIDTSVLALLAQVLFELSD
NT seq
4497 nt
NT seq
+upstream
nt +downstream
nt
atgaatcagcataatatgatgcaacagttttatgagcaacaacctcagaataatataaat
ggttttcctactggatctgcttttcatggaaaccagcaaggcacctacaatggctcaagt
tctacttcaacaccttatagaaatcaaaatggtatgcctcgttattctcaaaatgaaaac
gactcttttgaaagtactcaaagcaacatgtcgcaatcatcagttaattatacagctggt
aataattatatggacccaagagttattgggtttgatccacgtaatcattctaattatgaa
actcagaatggtatggtacaaggtatggaacttttctcacaaaatatgtatcctggaaaa
ggaaggtttaatgaaatgactggaatgattaatcctggttcagcttttcaaagacaaaga
atgttaggacctggatcagataatgattttatatcacctacaaatccatatggtggtggt
tttagtccacaacagatggctcaaatgattcaacatcaaagatatgatgtttatcaaaga
caagttcatgaacaacaagtatctgcacaacaacttgctcactcaactagagatacatgt
cagtttcctttatcagctgatactgatcaaacaaataataactcagataatgatttaaaa
cagtctcaaaattctttgccaaatcgaaaattaacaaattctactagagcagatataaca
tcaaatttggttgacagtatgcagagaacaggctctgaaggaatgcagagaactagttct
gaaggtatacctagaactgggtctgtaaatatagatagtgatggacatagaaatgcagct
attattgcagcttctgaagttagagcacaagctgcagcgtcaacatccaaaggaagagtt
ccgtttccaacacctaattcaaacactatgaataccttcccctttaatataagaaatttc
catgttaataatgatcaaatgccctctccttttccacataacttacattcacctgattat
agtgcaattatgtctccaaataaagattatactggagttgctctttcaccattgagtcaa
caaggaagaaggacacctagaagtggaataccacctccaccctactctcctcttccacat
aacaatgatagtaaccatttaggatctgtcaaaggttctaattcaaatatttcttcactt
ttaaaaggaaatcttcaaaaacaattggatatttttactccagttagttattcaaatcaa
gaatataatgttgataaaccaagcagccaaggaattggttcctctgcacgactctctggt
acacctaataatgttctttcttgttctccttctgcacagtcgccttttcaagatgatttt
gactttggtatgagtccatcttggccatctacgccagcttctcctgaaagatctaaaagg
ttaaagtcacaagcttctcctagacggtttgaccaactctcaaaaatttacgaggttatt
actgatgaagaaaaaagaaattttttagatagatatttagcattcatgagtataaatggg
acacctgtgacaaaagttccagtaattaatgagcaacctttggatctctatatacttttc
cgatcagtttgtgaacgtggtggaattaatgcggtattggagaaacatcagtttaaggaa
attctgaaggctctaaagttgcctgttgataatagtttgttagcatattctgtaaaagag
cagtatatgaagtatcttcatgcatatgagataaaggctaaaaatgcactactcaagcaa
tggaaagacactccgtttgatcgaaacgtatctcaagaaactccattagcaacaatctct
ttaaatgaatcattgcattcaactatgaatgacatgaagtcctcagttaccatgaacgca
aatactcataacaacccaactctacctgtatcaagttggtcatcaacttctccagtctca
gaaattaaaacatctaattcatctataatttcatcatcctcacttcaatatggcccgtgt
ccttcgtaccaaaatcaaccaaaccctatttcatatggaactcaaaatattccaaattat
ggatcgggtcaacaagatataacaataaataacgcttatccaaataatatgccttactct
ggatatccaaatccaatgtttccgcatggtcctctaccaggttacaattctatgttacca
ggaattccgcctgaaaatatgcaaaattcctggcctcgtgttttttcaccgcatcaaggt
cctccagaactctttcctgaaggtttaccacgtatgccatggagtcaacaaactcaaaga
caacctgttcattcttttacaaactcaaattttactcctggaaaaccacgttctcaagct
ccattatgtcgtcaagatcaactcgaacaaatgaaatatcatcaacaaatgaaaatgcca
cactatcagcatccaacaatgcaaccaaagttttctatgccaactaagaatacaaataaa
atagttcaacaaaataacatttctgatgtaaagtctactaataatccatcgaataaacgt
gattttggctttcctccagatagtgttgagggagccaaaccacttttgaggaagcgtaaa
aagatgacgtccaaggatttaggtcccattgaagcctggcgaataatgatgtcattaaaa
tctggcttagttgctgaatgcagttgggcaatagacaccttaaacatacttctttctgac
aataaaacaataacttatttccatcttacccaattaccaggacttcttgatacacttatg
gatcattacaggcgttgtctatcattaatgtttaaatactttaaaagtgacgaggtgcct
ctttttcccgaaataaatgatgaggcagttgataccgaaaaaattctcaattcgctctgg
gtaggtgtttgtaaaaatgctgaacaaagttatacggcaaacatagcatcatctgctgtc
atggcagaagttgatgagtatgtcgtaacatcaaatgaaacagggagccgacttagtagt
actttaacgtcgcatattcaaacgaactttccatcaaataacttaaaaactaatcgtttc
cctcaaggtcttccatatgaaagtgaagctgatatcgaaaaaagaaaacggttagaacgt
gtcacttctcctcgtttttctattgaaaaaacaacgcctgatcatgagaaaaattcgctc
aaaactaattgcgacaaaaataacgtaatatcggatgttagtacagagcaagttaactct
gcttgtcttgatattctgaaagacttaataaatgcatatgaaagcaaggaaacgagttct
cctgatcttttagtagaaaaagtcatcaaagatttagaatttgatttaccttgtgataaa
aagtatttagaagactcgagagagtttataagttatcttaatagacgctttcaaagagag
aatcgcggtaatgtagaaaatgagcattgtgttttaaagcaattttcgccttttcttgaa
ctgcaagaaagtgaactgtctcttcttcacaggtgtgttgctatgtcaaatatttttcgt
agcctgtctttcatccaaggaaatgatagtgaattagcaaacaatgttggattattaatt
attgctggacatcttctaacttatcaacatgagcataccataactgatcattcaaagttc
aaaatgggacttgataagcgagacttggataatagttctatttcaacaagcgaaaatgaa
gtttggttagagtctttggcaaacatgagagaaaacacgatggttctattgtctaatatt
tcggggcatttaaatctctcgatttatcctgaagaaattcataaaccaatcataaccggt
cttgtccattggttagtttgtaaatcatctgaagctttagatccattgcccacagcaccg
gggccacatgctctctcaccgcaatgtttatcaatagaaactctagctaaaattacaatt
aatttaaataacattgaacttattgctcgttgctctaatcagctagtgttggaaaacatg
gctggtgctcttattgagcaattttcaaaaaaacatttagttcccgttcgtgaattttct
ttaatactattagacaatttagcccgatgtgaagatttttgtaaagttttagcattgcgg
cggtcttgtgtaagtagcattgttaaatttatatgcgatgctgaacggaacacttcgaat
tacttatcgtcaggcggaagagttcaacctggacttaatgctgaagatatatgtggaacg
agtattagtttattgcgtcgctctgtcaatatccttctctctctttcaaaattgccatac
aataagcatcgattgctaccgtttactgacgatatattggctttatccacatctcaaatg
atcgacacgagtgtgcttgctctacttgcgcaagtattatttgaactttcagattaa
DBGET
integrated database retrieval system
