Hydra vulgaris (swiftwater hydra): 100209709
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Entry
100209709 CDS
T01080
Name
(RefSeq) FACT complex subunit SSRP1
KO
K09272
FACT complex subunit SSRP1/POB3
Organism
hmg
Hydra vulgaris (swiftwater hydra)
Brite
KEGG Orthology (KO) [BR:
hmg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hmg03000
]
100209709
03036 Chromosome and associated proteins [BR:
hmg03036
]
100209709
Transcription factors [BR:
hmg03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG2-related
100209709
Chromosome and associated proteins [BR:
hmg03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
FACT complex
100209709
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PH1_SSRP1-like
Rttp106-like_middle
SSrecog
POB3_N
HMG_box
HMG_box_2
HMG_WDHD1
DUF7493
Motif
Other DBs
NCBI-GeneID:
100209709
NCBI-ProteinID:
XP_002159252
UniProt:
A0A8B6XKF8
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Position
10:22860785..22918507
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AA seq
774 aa
AA seq
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MTDILEFNDVYSLVRGALNPGRLKLNKSGTIFKSYKTGKVDSTPVAEIQSSKWMRVARGF
GLKLVLKNGHQEKYHGFKEVDYEKVKEFYAKNFVMELEDQDLSVSGWNWGEAKFKGSVMS
FEVENKAAFEIPLQDVSQATTGKNEVTIEFHRNDDAKVQLMEMRFFVPEKDEEDAVKNFH
DQIMSKADIIQATGDAIVTFDEVACLTPRGRYSIRVYPKFLQLHGKTYDYKIPRTAIVRL
FLLPHQDQRFMFFVISMDPPLRQGNTRYPFLILQFERDEEMSCELNLTEEEIENKYNNKL
TRKMSGAVFEIVSRVLKEICQQKITVPGSFKSKTGTSAISCSYKASNGLLYPLEKGFMFV
HKPPVYIRFDEISSVNFARGSTTGRTFDFEMDLNNGTVVVFSSLPKDEYTPLFDFVNQKK
LRIKNKVASSGGSNLDQMIESNPDEHDAYLQRMKAEGAERDDEANEGDSESESEDEDFNP
ANEKVESVREEFDSDVGNSTDDEDNESNSEAKNKKRKSEPKKNEPKIKRPKKEEGSSKKK
KKDENAPKRPMSAFMLYMNEVREKIKADNPGIAFTDIAKKGGEQWKTLTDKTKWENMAKE
AKNKYTIDFAAYSKTIKDGGAAIKDSGAAPSGKSAKSGSSTQTNKKSNSKNIKDMMKSKE
SPMKKDAYKSKEYIDTSDDDSTDEDEKKKKTIQKIEKPVVKSKPEDDDDDDDGSDSDESA
SQEITPQESQRSMRSKGNSSQADFQELKELSEAEEDEAEFSGEQTDDDDDDESD
NT seq
2325 nt
NT seq
+upstream
nt +downstream
nt
atgacagatattttggagtttaatgatgtgtattccttagtacgtggtgcactaaatcct
ggtcgattaaaactgaacaaaagtggcaccatttttaaatcatacaaaacaggaaaggta
gattccactccagtagctgagattcagtcatcaaaatggatgagagttgcacgaggcttt
gggcttaaattagtgcttaaaaatggccatcaagaaaaataccatggatttaaagaagtg
gattatgaaaaggtaaaagagttctatgcaaagaattttgtaatggaattggaagatcaa
gacttaagtgtctctggttggaattggggagaagcaaagtttaaaggatcagtgatgtca
tttgaagtagaaaacaaagctgcttttgaaatcccattacaagatgtttctcaagctact
actggaaagaatgaggtaacaatagagtttcatcgcaatgatgatgcaaaagttcagcta
atggaaatgagattttttgttccagaaaaagatgaagaagatgctgtcaaaaactttcat
gatcaaattatgtctaaagcagatattatccaggctactggagatgctattgtaactttt
gatgaagtagcatgtcttacaccaagaggtcgatacagtatcagagtttatccaaagttt
ttgcaacttcatggtaaaacatatgattataaaataccccgtactgctattgttagactt
tttttgcttcctcatcaagaccaaagattcatgttttttgttataagtatggatccacca
cttcgtcaaggaaacacaagatatccattccttattctacagtttgaacgagatgaagaa
atgtcttgtgaactaaatcttacagaagaagagattgaaaataaatataacaataaactt
acaagaaagatgtctggtgctgtctttgaaattgttagtcgtgttttaaaagaaatctgt
caacaaaaaataactgtcccgggatctttcaaaagcaaaactggtacaagtgcaatatcg
tgttcctataaagcaagtaatggtttgttgtatcctcttgagaaaggttttatgtttgta
cataaacctccagtgtatatacgatttgatgaaatatcttcggtaaattttgctcgtggc
agtacaacaggtcgaacatttgattttgaaatggatttgaataatggaactgtggttgtt
tttagtagtttacccaaggatgagtacacacctctctttgactttgtcaatcagaaaaag
ctgagaattaagaataaagtggcaagctctggtggtagtaaccttgatcaaatgattgag
tcaaatccagatgaacatgatgcgtatttacaacgtatgaaagcagaaggtgctgagcga
gatgatgaggcaaacgaaggtgatagtgaaagtgaaagtgaagatgaagactttaatccg
gcaaatgaaaaagtggaaagtgttcgagaggaatttgattctgatgttggcaatagcaca
gatgatgaggataatgaaagcaactcagaagcaaaaaacaaaaaaagaaaatcagaacca
aagaaaaatgaacccaaaattaaacggcccaaaaaagaggagggatctagtaaaaaaaaa
aagaaggatgaaaatgctccaaaacgtcctatgtctgcatttatgttatacatgaatgaa
gttcgtgaaaaaattaaagctgataacccaggaatagcttttactgatatagcaaaaaaa
ggtggtgagcagtggaaaacactcacagataaaacgaaatgggaaaatatggcaaaagaa
gcaaaaaataaatatactatcgattttgcggcttattcaaaaactataaaagatggcggt
gctgctataaaagatagcggcgctgctccttccggtaaatcagcaaagagtggtagttca
acacaaactaataaaaagtcaaattcaaaaaacataaaagatatgatgaaaagtaaagag
tctccgatgaaaaaagatgcttataaaagcaaagaatacatagatacaagcgatgatgat
tccacggatgaagacgaaaagaagaaaaaaacaatacaaaagatagaaaaacctgttgtc
aaatcgaaaccagaggatgacgacgatgacgatgatggttcagatagtgacgaaagcgct
tctcaagaaataactcctcaagaaagtcaacgatctatgcgttcaaaaggtaacagttct
caggctgattttcaggagttgaaagaattatctgaagcagaagaagacgaagcagaattt
tcaggtgagcagacagacgacgatgatgatgatgaaagtgattaa
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