KEGG   Hydra vulgaris (swiftwater hydra): 100209738
Entry
100209738         CDS       T01080                                 
Name
(RefSeq) splicing factor 3B subunit 1 isoform X1
  KO
K12828  splicing factor 3B subunit 1
Organism
hmg  Hydra vulgaris (swiftwater hydra)
Pathway
hmg03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:hmg00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    100209738
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:hmg03041]
    100209738
   03036 Chromosome and associated proteins [BR:hmg03036]
    100209738
Spliceosome [BR:hmg03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    100209738
 Complex B
    100209738
 Complex C
   U2 SnRNP specific factors
    100209738
Chromosome and associated proteins [BR:hmg03036]
 Eukaryotic type
  Chromatin remodeling factors
   B-WICH complex
    100209738
SSDB
Motif
Pfam: SF3b1 PPP2R1A-like_HEAT TOR1L1_N HEAT_EZ HEAT HEAT_EF3_N HEAT_ECM29 HEAT_2 Htt_N-HEAT_1 XMAP215_CLASP_TOG
Other DBs
NCBI-GeneID: 100209738
NCBI-ProteinID: XP_047135870
LinkDB
Position
7:2132969..2179005
AA seq 1338 aa
MAAVQQDIESQIKELQNLRGNKINDKDEETQKKAGIAFGTAVEAELYGTASDKYAGYDMS
IATNDQEEDEDDYSSAPLGTSKLSSFTAPQAVLKDLAKNGADVDPFAATRKPTIAERQNE
YQQRMRNLMISPARVDPFADGGKTPDPKLRSYHDVLKEQKLIKDQAAVVKKIQDKAKAGE
LKVTKPAKKRSGRWDQPSGEEVAPKKKWDQVDTPSSTRWDETPGRSKGAETPGKGGDTPG
TVQGSETPAATPIGEETPGRTPGATPKMSWEATPSYIQAGSTTPGNATPGGTTPSASSRR
KRWDETPGQSTDTPGRTPGWAETPRTDRQGSETPGMTPTPHGSKRKSRWDETPQINATPG
SGTPHATPAGSGMGTPAGTPSIVGTPGVTPGGTLAMQMQTPTPGHLISMTPEQMQAYRWE
KEIDERNRPLTDDELDTLMPFEGYKVLQPPANYQPIRTPARKLIATPTPLNMGTGFRMQT
DERGNIKGVIDEQPPGNLPSLKPDDYQYFDKLLVDVDETTLSAEEQRERKIMKLLLKIKN
GTPPMRKAALRQVTDKAREFGAGPLFNQILPLLMSPTLEDQERHLLVKVIDRILYKLDDL
VRPYVHKILVVIEPLLIDEDYYARVEGREIISNLAKAAGLATMISTMRPDIDNIDEYVRN
TTARAFAVVASALGIPSLLPFLKAVCKSKKSWQARHTGIKIVQQIAILMGCAILPHLRNL
VEIIEHGLIDEQQKVRTITALAIAALAEAATPYGIESFDSVLKPLWKGIKQHRGKGLAAF
LKAIGYLIPLMDAEYAYHYTREVMIILIREFQSPDEEMKKIVLKVVKQCCATDGVEANYI
KEEILPEFFKHFWTHRMALDRRNYRQLVDTTVEVANKVGAAHIIGRVVDDLKDENEQYRK
MVLETIEKVMSNLGASEVDSRLEEQLIDGILYAFQEQTNEDVVMLNGFGTVVNAFGARTK
PYLPQICGTILWRLNNKSAKVRQQAADLIARISYVMKLCGEEKLMGHLGVVLYEYLGEEY
PEVLGSILGALKSIVNVIGMNKMTPPIKDLLPRLTPILKNRHEKVQENCIDLVGRIADRG
AEHVSAREWMRICFELLELLKAHKKAIRRATVNTFGYIAKAIGPQDVLATLLNNLKVQER
QNRVCTTVAIAIVAETCSPFTVLPALMNEYRVPELNVQNGVLKSLSFLFEYIGEMGKDYI
YAVTPLLEDALMDRDLVHRQTACAAIKHMAIGVCGFGCEDSLTHLMNYVWPNVFETSPHV
INAVIEAIEGMRVGLGPLRLLQYVLQGLFHPARKVRDVYWKIYNGLYIASQDALVAGYPS
VPNEGENNYLRTELHYFL
NT seq 4017 nt   +upstreamnt  +downstreamnt
atggctgccgttcagcaagatatcgaatcacaaataaaagaactccaaaatttgagaggt
aataaaataaatgataaagatgaagaaacccaaaaaaaagccggtattgcttttggaact
gcagtagaagcagagctgtatggtacagccagtgacaagtatgctggttatgatatgtca
attgctactaatgaccaagaagaagatgaagatgattattccagtgctccattgggtact
tcaaaactttcttcttttactgcacctcaagcagttttaaaagatcttgcaaaaaatggt
gcagatgtggatccctttgctgcaacaagaaaaccaacaattgctgagcgtcaaaacgaa
tatcagcagcgtatgcgaaatctgatgatttctccagccagagtagatccatttgctgat
gggggtaaaacaccagatccaaaattgcgttcttatcacgatgtcctaaaagagcaaaag
ttgattaaagatcaggctgctgttgtaaaaaaaattcaagataaagctaaagctggagaa
ttgaaagtcacaaagccagctaaaaagcgaagtggaagatgggatcagccatcaggagaa
gaagttgcacctaaaaaaaaatgggatcaggttgatacaccatcaagtactagatgggat
gaaacaccaggaagatctaaaggtgcagaaactcctggtaagggtggtgacactccaggc
actgtacaaggaagtgaaactccagctgctacacctattggtgaagaaactccaggtcga
actcctggtgcaaccccaaaaatgtcatgggaagccaccccaagttacattcaagcagga
tctactactcctggtaatgctacacctggtggaactacaccatcagctagttctcgtaga
aagagatgggatgaaacacctggtcaatctactgatactcctggaagaactccaggatgg
gcagagactcctagaacagaccgacagggttcagagactcctggcatgactccaactcct
catggttcaaagcgcaaatctcgttgggatgagactcctcaaataaatgctacacctggt
agtggaactccacatgctactcctgcagggtcaggcatgggtacacctgctggaacacca
tcaatagttggtacaccaggagttactccaggaggaacactagctatgcaaatgcaaact
cctacaccagggcacctaatatctatgactcctgaacaaatgcaagcttacagatgggaa
aaggaaatagatgaaaggaatcgaccattaacagatgatgaacttgatactttaatgcca
tttgaagggtataaggttcttcaaccacctgcaaattatcaaccaatacgcacacctgct
cgaaagcttattgctacaccaacaccattaaatatgggaactggttttcgaatgcagact
gatgaaagaggcaacatcaaaggtgttattgatgaacaaccaccaggaaatcttccaagt
ttaaagccagatgactatcagtattttgacaaattgcttgtagatgttgatgaaacaaca
ttaagtgctgaagagcagagagagcgtaaaatcatgaaacttttattgaaaattaaaaat
ggtactcctccaatgagaaaggccgctctacgacaagttacagataaagctcgtgagttt
ggtgcaggacctttgtttaaccagattctgccattgcttatgtcgccaacactagaagat
caagaacgtcatttattagtaaaggttattgacaggatattatacaagcttgatgacctg
gtcagaccttatgtgcataaaattcttgtggtgattgaacctttgttaatagatgaagat
tattatgcacgtgttgaaggcagagaaattatttcaaaccttgccaaagctgctggctta
gctacaatgatttccaccatgagacctgatattgataacatagatgagtatgtgcgaaac
acgactgcaagagcttttgctgttgttgcttctgccctcggtattccttctttgcttccc
tttttaaaagctgtatgtaaaagcaaaaaatcatggcaagcacgtcatactggaatcaaa
attgtccaacaaattgctattcttatgggatgcgctatattgcctcatttaagaaatctt
gttgaaattattgagcacggtttaattgatgaacaacagaaggttagaactattactgct
cttgctattgctgcgttagcagaagctgcaactccatatggcattgaatcttttgacagt
gttttaaagccactttggaaaggtattaagcaacatcgtggtaaaggtctagctgcattt
cttaaggctattggttatctaattccacttatggatgctgaatatgcatatcattacaca
agggaagtaatgattattttaattcgagagtttcaatctcccgatgaggaaatgaaaaaa
attgtactgaaagtcgttaaacagtgttgtgctacagatggtgttgaagctaattatata
aaagaagaaatattgcctgagttttttaaacatttttggacacatcgcatggcacttgat
cgtagaaattatcgccaattagttgatacaactgtagaagttgctaataaagttggtgca
gctcacataattggcagagttgttgacgatctaaaagatgaaaatgaacaatacagaaaa
atggttcttgaaacaattgaaaaagttatgtcaaatcttggagcatctgaagttgattca
cgactagaagaacagttaattgatggaattctttatgcttttcaagaacaaactaatgag
gatgtagtcatgctaaatggatttggaacagtagttaatgcttttggtgcgcggaccaaa
ccatatctcccacaaatatgtggtactatattatggcgtttaaacaataaatcagccaaa
gtccgtcaacaggctgctgatcttattgcacgaatatcatatgtcatgaaactatgtggc
gaggaaaaacttatgggccatttaggtgttgttttgtatgaatacctcggtgaagaatac
cctgaagttcttggaagtattttaggagctttgaagtcaattgtaaatgtgattggtatg
aataaaatgactccgcctattaaagatttattgccccgtcttactccgattcttaaaaac
agacatgaaaaggttcaggaaaactgcattgacttagttggaagaatagctgatagaggt
gctgagcatgtatctgctagagaatggatgagaatatgttttgaacttctagaattacta
aaagctcataaaaaagctatacgacgagctacagttaatacatttggatatatagcaaaa
gctataggtccacaagatgtacttgctacattattgaataacttaaaagtacaagaacgc
caaaatcgtgtgtgtacaactgttgctatagcaattgttgctgaaacatgctctccattt
actgtcttacccgctctaatgaacgaatacagagttccagagctaaatgtacaaaatggt
gttttaaaatcgctttcgtttttatttgagtatataggagaaatggggaaagattatata
tatgcagtaactcctttacttgaagatgcactaatggatcgagatttagttcatcgacaa
acagcttgtgctgcaattaagcatatggctattggtgtgtgtggcttcggttgtgaagat
tctttaactcatttaatgaactatgtttggcctaatgtttttgagacatcgccacatgtt
attaatgcggtgattgaagccattgaaggcatgagagtaggcttggggcctcttcggctt
ttgcaatatgttttgcagggtttatttcatcctgcaagaaaagttcgcgatgtatattgg
aaaatttataatggcttatatattgcatctcaggatgctcttgttgctggctatccatct
gtaccaaatgaaggagaaaataattatttacgtactgaacttcactactttctataa

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