Hydra vulgaris (swiftwater hydra): 100210018
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Entry
100210018 CDS
T01080
Name
(RefSeq) 3'-5' exoribonuclease 1
KO
K18416
3'-5' exoribonuclease 1 [EC:3.1.-.-]
Organism
hmg
Hydra vulgaris (swiftwater hydra)
Brite
KEGG Orthology (KO) [BR:
hmg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hmg03019
]
100210018
03036 Chromosome and associated proteins [BR:
hmg03036
]
100210018
Messenger RNA biogenesis [BR:
hmg03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
100210018
Chromosome and associated proteins [BR:
hmg03036
]
Eukaryotic type
Gene silencing
RNA interference (RNAi) pathway
Other RNAi proteins
100210018
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
SAP
KELAA
Rv2179c-like
Motif
Other DBs
NCBI-GeneID:
100210018
NCBI-ProteinID:
XP_002167097
UniProt:
T2MAJ4
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All DBs
Position
3:9676035..9716251
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AA seq
287 aa
AA seq
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MKMTENGLHNSISVHKEESLVHSSEFDHPVYKKISAANGRINKMTNIELLEALTYLKLGT
KGTKEILQKRLKAQVKKQHLAENNLVANPKSCYVDYYVVIDFEATCDEPNPSGFQHEIIE
FPAVLVKTSTLEIVSEFHSYCRPVINPVLSEFCKSLTGITQVQVESSSVFEVVLQRFDKW
LKQQVMPTETFCIATDGPWDLDRFLKNQCKTLNIQIPHYFHRWVNIRKHFYNYYKINQAN
VELMLQHLGMEFEGRPHRGIDDARNIARILIQLIRDGADPLINESLR
NT seq
864 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatgactgaaaatggattgcataatagtatctcagtgcacaaagaagaatcatta
gtacatagcagcgagtttgatcatccagtctacaaaaaaatatctgcagctaatgggcgc
attaataaaatgactaatattgaacttttagaagcattaacttatttgaaattgggaaca
aaaggtacaaaagagatacttcaaaaacgtttgaaagctcaagtgaagaaacaacatctt
gcagaaaacaatttggttgcaaacccaaaaagctgttatgtagattattatgttgtcatt
gattttgaagccacttgtgatgaacctaatcctagtggatttcaacacgaaatcattgag
tttcctgctgttttggtcaaaacttctaccctagaaatagtatctgagtttcattcttat
tgtcgccctgttatcaatcctgtactatctgaattttgtaaatctttgactggaattacg
caggttcaggtagaatcttcctcagtttttgaagttgttcttcagagatttgataaatgg
ttaaaacaacaggttatgccgacagaaacattttgcattgctactgacgggccatgggac
ttagaccgttttcttaaaaatcaatgcaagactcttaatattcaaattccgcattatttc
caccgatgggtcaatatcagaaagcatttttataattactataagataaatcaggcaaac
gtagaattaatgcttcagcatttaggaatggagttcgaaggacgtccccatcgtggaatt
gatgatgcgcgcaatatagcacgtattttaattcagttgattagagacggagcggaccca
ttaatcaatgagagtcttcgataa
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