Hydra vulgaris (swiftwater hydra): 100210099
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Entry
100210099 CDS
T01080
Name
(RefSeq) transcription factor IIIB 90 kDa subunit
KO
K15196
transcription factor IIIB 90 kDa subunit
Organism
hmg
Hydra vulgaris (swiftwater hydra)
Brite
KEGG Orthology (KO) [BR:
hmg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hmg03021
]
100210099
Transcription machinery [BR:
hmg03021
]
Eukaryotic type
RNA polymerase III system
Basal transcription factors
TFIIIB
100210099
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
BRF1
Zn_Ribbon_TF
Zn_ribbon_tTFIIB
Motif
Other DBs
NCBI-GeneID:
100210099
NCBI-ProteinID:
XP_012554613
UniProt:
A0A8B7D968
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All DBs
Position
5:40755531..40792083
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AA seq
670 aa
AA seq
DB search
MGISCKNCGGIEIDNDPARGDSVCVSCGSVVESLCIVNDIEFHENSAGSSSVIGQFVSSE
GQNRVGSYSKFGVGQDHRQVALENGKQLINNYGGQIKMSHHCLDSAYMFFKMAASKRFTV
GRKTIYVVGACLYLVSRTEKTPHMLLDICDAIQCDIVVLGRVFLALARTLCIDCPIVDPS
LYIHRFAHQLDFGDKENEVSMAALRILARMKKDWIHLGRRPSALCGAALIIAGKLFNFNV
TMDDIVKLVRMSKTTVFKRLMDFSKTATGKLTTDEFKRVDLEEEADPPCYTYGKKRIQFA
QEIDKKHNFVSSYLLSQVVKTQRRLEVLLEKRHNINSEIEKVLPESKAFVYQKQLPSYCS
LHKYELDEKGEFKVPHFVIHEEPDDILKEEVKTVASNTLLLDQCVTKVEDMSTKSGECNL
VSAKSEKNIGDINCDEIDLEGIDDEEIEELLLTEDEIKIKTEIWLEENKEYLQKMKEKEE
DLRMKEEEENKLGNKKKKKARKKPRDRPIAGTADEAIQTMLAEKKISSKINYDVLRGLKS
ETVDECHQVSKPETISVGDNFDIKPQLLSAVADSEKRLLSKDMPIVYETGLQRNKTSFTS
SLESIHSASKRIKLEVKSDETEKKEILEEFAGEEEEDDEPEDLVTASSIFAKEVDDYDHN
AYDEDADAFY
NT seq
2013 nt
NT seq
+upstream
nt +downstream
nt
atgggtatttcatgtaaaaactgtgggggtattgaaattgacaatgatccagcacgagga
gattcagtatgtgttagctgtggatctgtagtagaaagcttgtgtattgtaaatgatata
gaattccatgaaaatagtgcaggaagttcttcagttattggtcaatttgtctcttcagaa
ggtcaaaatcgtgtaggatcttacagcaaatttggtgttggacaagatcacagacaagtt
gctcttgaaaatggcaaacaattaattaataattatggaggacaaattaaaatgagtcac
cattgtcttgattcagcatatatgttttttaaaatggctgctagtaagcgatttacagtt
gggcgcaaaacaatatatgttgttggagcctgtttgtatttggtatcaaggacagagaaa
actccacacatgttgcttgatatttgtgatgcaattcagtgtgatatcgttgttttgggt
cgagtttttttagctcttgcaagaactctttgtatcgactgccctattgttgatcccagc
ctctacatacatcgatttgctcatcaacttgattttggcgataaagaaaatgaagtttca
atggctgcactccgaattctagctcgaatgaaaaaagattggatacatttaggcaggaga
ccatcagctttatgtggagcagcattgattatagctggaaagcttttcaactttaatgtt
acaatggatgatattgtaaagttggtcagaatgagcaagacaacagtttttaaacgactt
atggactttagtaaaacagctactggtaaacttacaacggatgagttcaaaagagtcgat
ctagaggaggaggctgatcctccatgttatacttatggcaaaaaacgaatacagtttgct
caagaaatagacaaaaagcataattttgtatcaagttaccttttatcacaggttgtaaaa
actcaacgtcggctagaagttttattagaaaaacgccataacattaacagtgaaattgaa
aaagtgttgcctgagtcaaaagcattcgtatatcaaaagcaactcccttcttattgttca
ttacacaagtatgagttagacgaaaagggtgagtttaaagtgccgcatttcgttatccat
gaagagccagatgacattttaaaagaagaagtaaagacagttgcaagcaacacattgttg
ctagatcaatgtgtgactaaagtagaagatatgtcaacaaagtctggtgagtgcaaccta
gtatcggcaaagtctgagaagaacataggagatataaattgcgatgaaattgatttggaa
ggtattgatgatgaagaaatagaggaattgctattgacagaggatgaaattaaaattaaa
actgaaatttggctagaagaaaataaagagtatcttcaaaaaatgaaagaaaaagaagaa
gatcttcgaatgaaagaagaagaggagaacaaactaggaaataagaaaaaaaaaaaagcc
agaaagaaacctcgtgatcgaccaatcgctggtacagccgacgaggccatacaaacaatg
ttagcagagaaaaaaatatcttcaaaaataaattacgatgtcttacggggacttaagtca
gaaactgtagacgaatgtcatcaggtcagtaaacctgaaacgatttccgttggtgacaac
ttcgatattaaacctcagcttctttctgctgtcgccgacagtgagaaaagacttttgtca
aaagatatgcctattgtttacgaaactggtttgcaaagaaacaaaactagttttacttca
agtcttgaatcaatacacagcgcaagcaaacggataaagttggaagtgaaatccgatgaa
acagaaaaaaaagaaattcttgaagagtttgctggcgaagaagaagaagacgacgagcca
gaagaccttgtaacagcttcctcaatttttgctaaagaagttgacgactatgatcacaat
gcgtatgacgaagacgcagatgcattttactga
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