Hydra vulgaris (swiftwater hydra): 100210373
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Entry
100210373 CDS
T01080
Name
(RefSeq) F-box only protein 11 isoform X1
KO
K10297
F-box protein 11
Organism
hmg
Hydra vulgaris (swiftwater hydra)
Brite
KEGG Orthology (KO) [BR:
hmg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
hmg04121
]
100210373
Ubiquitin system [BR:
hmg04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
100210373
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta_helix
NosD
F-box-like
F-box
zf-UBR
F-box_4
DUF5902
PRANC
Motif
Other DBs
NCBI-GeneID:
100210373
NCBI-ProteinID:
XP_012554033
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All DBs
Position
8:complement(3316018..3335576)
Genome browser
AA seq
865 aa
AA seq
DB search
MFVDHYGLLNNSTMRFKKLITFVTYSLYASFCSYKMKSLRSKTRQSLQQHADHQNKNYMQ
KFLPDELVLKVCSFIRPKDLANLSCTCKRLRTLCDDLILWKRLYYNCYRLEAPIQKCPST
KLYQVFNLISGPGKPELSWKKLFPFLIKANHITKDLMLIKSLENLGRKCFSSIQEGIDNS
TSGILLIHPDTYMESLKINSPVTLIGAGSPGGPNEVHICNSAQTVLKLGPGAGKSHIAFL
RLSIQRQENVAPTRHHCIEICNDNSPIIQDCFITSQSTCAAAVHVHGSGCSPRIVRCKIS
DCDNVGLFISEGAQGVYEDNDIFSNRLAGVWVKSGANPIMRRNEVHHGKDAGFFIFDGGM
GYYEENDVHSNRIAGIEVRSGANPTVVRCHIHHGFTGGIYVHDDGRGEFLANRIHTNTFA
GVWVTSGSNPTIKDNEIYHGQQGGIYVFGDGRGLIENNDIHGNALAGIQIRSNSNPIVRK
NRIHHGLHGGIYIHEGGMGLIEENEIYANTLAGIWITTGSAPILRHNRIHSGKQVGVYFY
DKGCGTLEDNEIYNHKYSGIQIRSGSNPVIRQNKIWGGKNGGVLIYNGGQGILEDNEIFD
NAMAGVWIKTESNPILRRNKIHDGHEGGVCIFNNGKGLLEENDIFRNSLTGVLISTSSFP
VLRRNRIFDGGAAGIEITNGAGGVLQRNEIFNNRFDGICLATGVKPKMLENNCHDNKMAL
AEAISAGKCLYQVSGSSCYPMHDFFRCLTCSSTENLAICVNCIEICHSGHDVEFVRHDRF
FCDCGAGTTPHTCKIALSSTTIVALKSSTQAKKTKSPRAGRSPSAKKRRVATVRCSRSST
RNQNRNQSGVDNLDSMSSEIYSIGL
NT seq
2598 nt
NT seq
+upstream
nt +downstream
nt
atgtttgtagatcattatggacttttgaacaactctacaatgcgtttcaaaaaattaata
acttttgtaacttacagtctgtatgctagtttttgctcttataaaatgaagagtcttagg
agtaaaactagacaatcgttgcagcagcatgctgaccatcaaaacaaaaattacatgcag
aagtttttacctgatgaacttgtattaaaagtttgcagtttcataagaccaaaagatcta
gctaatttatcatgtacctgtaaaagacttagaactttatgtgatgatttgattctatgg
aaacgactttattacaattgttatagactggaagctccaatacaaaaatgcccatcaaca
aagctctatcaagtttttaatttaattagtggaccaggaaaaccggaactgtcatggaaa
aaattattcccttttttaatcaaggctaatcatataacaaaagatctaatgctaattaag
tctttagaaaatttaggaagaaagtgtttttcttcaattcaagaaggaatagataattca
actagtggtattttgttaatacatccagatacatatatggagagtttaaaaattaattca
ccagtaacgctaataggagcaggttctcctggtggcccaaatgaagttcatatttgtaat
tctgcacaaactgttttgaagcttggcccaggtgctggtaaaagtcatatagcattttta
aggttgtcaattcaaaggcaagaaaatgttgcacctacacgccatcattgtattgaaatt
tgcaatgataactcaccaattatacaagattgttttataacttcacaaagcacatgtgct
gccgctgttcatgtgcatggttctggttgctcaccacgaattgttcgttgtaaaatatcg
gattgcgataatgttggtctgtttattagtgaaggtgcacaaggagtttacgaagataat
gacattttttctaatcgacttgcaggagtttgggtcaaatctggtgccaatccaataatg
cgtagaaatgaagtacaccatggaaaagatgctggtttttttatctttgatggtggtatg
ggttattatgaagaaaatgatgttcatagtaatcgaattgctggaattgaagttcgttca
ggagctaatccaacagttgtgagatgtcatatacatcatggtttcactggtgggatatat
gttcatgatgatgggcgtggagagtttcttgctaatagaattcatacaaacacttttgct
ggagtgtgggtgacatctgggagtaatcctaccattaaagataacgaaatttatcatgga
cagcaaggtggaatttacgtgtttggtgatggacgaggtttaattgaaaacaatgatatc
catggtaatgctctagctggcatacaaattagatcaaatagtaacccaattgtaagaaag
aatcgcattcatcacgggttgcatggtggtatatacattcatgaaggagggatgggttta
atagaagaaaatgaaatttatgctaacactttagcaggaatttggattacaacaggaagt
gctcctattctacggcataacagaatacacagcggcaaacaggttggtgtgtatttttat
gacaaaggatgtggaacacttgaagataatgaaatatacaaccacaagtattctggaata
caaataaggagtggtagtaatccagttattcgtcagaataaaatatggggaggaaagaat
gggggtgttttaatatacaatggtggacagggtattttagaagacaatgaaatatttgat
aatgctatggctggtgtttggattaaaacagaaagcaatcctatattaaggcgtaataag
attcatgatggccatgaaggaggagtttgcattttcaataatggcaaagggctgctggaa
gaaaatgatatatttcgtaattcactgaccggagttttaattagtacatcaagctttcca
gttttgagaagaaatcgtatatttgatggaggagctgcaggaattgaaattacaaatggt
gctggtggtgtattacagcgtaatgaaatttttaacaatcgatttgacggtatatgcctt
gcaactggtgtaaagccaaaaatgttagaaaataattgtcacgacaataaaatggcactt
gctgaggcaatttctgctggcaaatgtttatatcaagtatctggtagtagttgctatccg
atgcacgacttttttagatgtttaacatgttcgtctactgagaatttagcaatttgtgtc
aattgtatagaaatatgtcacagtggacacgatgttgaatttgttcgacatgacaggttt
ttttgtgattgcggggctggaacaactccacatacttgtaaaatcgctttatcgtccacc
accatcgtagcattaaaatcaagtactcaagctaaaaaaactaaatcacctagggcaggt
cgctcccctagtgctaaaaaaagacgtgttgcaactgttcgttgcagtcgttcgagcaca
agaaaccaaaatcgaaatcaaagcggagtagacaatcttgattcaatgagttccgaaatt
tattcaataggtttatga
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